SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4015_c0_seq1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		eukaryotic_initiation_factor_4E-2_[Bombyx_mori]
Ontology
GO:0001701 P in utero embryonic development
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005737 C cytoplasm
GO:0005845 C mRNA cap binding complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0017148 P negative regulation of translation
GO:0031625 F ubiquitin protein ligase binding
GO:0044822 F RNA binding
Transcript
Level		FPKM:6.67 TPM:6.71
ORF EntryO_BomoSK1231_3prime_partial:A_BomoSK_comp4015_c0_seq1
Sequence
(Nucleotide)
GTGTAATAAATATCAAATTTCATCAAATGATCTCTAAACTTTGTGATATTCTCCCATGCT
GTCAAATGACAGATTTGAATTTTGATGACGGAAAGAAAAAGGTTAGACACAGAAAAAGAG
GGAATAGGCTGAATAATTATAAATTAAAGCTAGTAAAAATAAATTAAAGTTAAGGAAACT
GTATATTTGATTATTAAGTGTCATAGTAAATATAGACTATTATTTACTAAATAGTCCGAT
TGTCCAGAGAACAACGTGTCCTAGGTTAGGCCGTTCTTGAAACATGTTAATATTGTTGGA
ATAACATGACTGAAAGGAAAATGTGCAAATTCTACAATTTAAACGTGCCCGAGCGACGGT
CTGGTGAGGCCCAGGGAATAGCGCAGAACCACGGCAACAACGAAGATGATGATAGGAATC
CCGACGATCCGTTGGTTCCTTACGTGCCGCCGCACGAACACAAGCTGGAATATAGCTACT
GGATGTGGTTTTCAAGGCGGCCCGCCCGAGATCTTACCACAACACCCACTGGTTACGGCC
AGGCGTTACGTTTGGTGGGTCGGGTGGGCAGTGTGGAACAATGGTGGGGTCTATATACAC
ATCTGGCTAGACCTTCAGAGTTACCTCCACTCTCTGACCTTCATCTTTTTAAGTTGGGTA
TTAAGCCAATGTGGGAAGATCCGGCCAATGTCAATGGAGGGAAGTGGGTGGTCAGATTAC
GTAAAACACAGACGGGTCGTGCATGGGAAGACTTATGTATGGCAATGCTGGGCGAACAAT
TTATGGTTGGACCAGAGCTGTGCGGTGTGGTACTCTCAGTACGATTTCAGGACGACCACC
TGGCAGTGTGGCACCGGACGGCGTCGGACACGGCGGCGGCGCATCGCGTGCGGGACGCCC
TGCGCCGCATCCTGCAGCTGC
(921 bp)

- SilkBase 1999-2023 -