SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp4012_c0_seq1
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_enhancer_of_mRNA-decapping_protein_3,_partial_[Bombyx_mori]
Ontology
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005737 C cytoplasm
GO:0031087 P deadenylation-independent decapping of nuclear-transcribed mRNA
GO:0033962 P P-body assembly
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:1990174 F phosphodiesterase decapping endonuclease activity
Transcript
Level		FPKM:7.78 TPM:7.83
ORF EntryO_BomoSK1229_3prime_partial:A_BomoSK_comp4012_c0_seq1
Sequence
(Nucleotide)
ATTAAGCATAGATAATACACACATTATGTTTCATTCTGCTCTTCGATAAATATTTAAAAC
TACATTTAACAGCACATTAAATATTGTCATTCGAATCGCGATACATATTTATAAGTACAT
TTTTGTAGAAATCGAAATCATATATATTTTTTAAAACAAAGAAAATGTCTAATTGGATTG
GATACGCGGTTTCGGTGAACTGTGGCGAACCTTTAGGCTGCTATCAAGGCACCATCCTTG
AAGCAGATGGAAACACGTTAACACTAACTAAAGCGTTTCGAAACGGATTTCCATATCCTA
AATTGCAAGTTACACTCAATGCTGCAGATATAAAAGATTTAAAAATTATTGAAGCTAAAC
CAGAACCATCAGAGCAGACTCACAGCACAGTAGCAGTGACTAAGAGTGGCAAAAAAGCTC
AGAAAGCAACAGTTTGTGAGAATTTACAGGCCAACCCTGCGCAGACTAGTTCAGGAACTC
CATCAACTAGTGTTGTTAACAATAAATCTGCTAATCGCAATACAGTACAAGGCCCAACTC
GCAGCAAACCCATTGAGATACAGGCAAATAGGAATAATAAAAATAATAACCATGCCGGTA
GCTACGGCAACTGCAGCTCTACGCCGAAAGGTCGCAACCTCGTTGGTCAAGAAAAAGCAA
GACGTCGGAATGAAGCATGCTTTGGAGAATCAACAGATGCCATCGATGACGATTTTGATT
TTGAAGGGAACCTTGCACTGTTTGACAAACGTGCCTTCTGGGAGCAGATGAGAAATTCCC
ACAAACCTGACCTTGTCAGGCAAGCAGATGATGCTGGGAAGTATAAGCACGATGAGAACG
TATTGGGAACTGCTCCGGTAGCCAGACACGCAATGAGAGTGCCAGATAACCTACGGGGTC
CGATTGACTATGTAACTGACGAGGGGGTGATCGTTCCGTCGGTCGTGCCGCGCGTCCGCA
GGCAGCTGTGGGAGGGTATGGTGAGCTACGGGCTAGCGGAGTGCGCG
(1007 bp)

- SilkBase 1999-2023 -