SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp3981_c0_seq1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_TAF5-like_RNA_polymerase_II_p300/CBP-associated_factor-associated_factor_65_kDa_subunit_5L_[Amyelois_transitella]
Ontology
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0030914 C SAGA complex
GO:0033276 C transcription factor TFTC complex
GO:0043966 P histone H3 acetylation
Transcript
Level		FPKM:6.37 TPM:6.41
ORF EntryO_BomoSK1191_3prime_partial:A_BomoSK_comp3981_c0_seq1
Sequence
(Nucleotide)
TGTCCCTACTATATAGGTCTATGGAGTGGTATTGTTTATTGTTTACAAATTTTACAATTT
GTACCTACCTTGAAAACGTAAAAACACTACAAATCCAGGAATTTAACTAATAAGTATTGG
CCGTGTAAAACGGTAGATTGTAATATATTATGTCCACCAAAGAGTATAAATTCAGTTCAG
TGCTCAGATAAAATGAATGTGTGATAAAATCAAACAAGTGAGACATCGCAAAACATTCTG
TTTTATTTTATTAAAAGTATTCAATGATAATGTCATTAATAAAGAAGACAAGAAACGATG
CAATTAAAGCTGCGGTGGCTTCTTATCTAGAAAGGCGAAACTATCCCGATACTGAATATT
ACGGTAACAATAACCCAAATTGCCAGAGTGCTGAGCAAATGGCAGTTTCCACTATTGTAC
AGTCTGAAGCAAGTCGTGCAAATTCTATCTTGTTTTCATGTATCAACAATGATTCCTCTC
AATACGATATACAATACACCAGGTTAGTCAACTTTATAAAAGAAATAAGAATCGAGAAAC
TAAAAAATGAGCTTCTGGGATTGTTGAGCCCTTTGCTATGTCATCTTTATCTAGAGATGC
TACGTGGGGAACACGGAGGTGCTGCACAAGTGTTTTTGAAACGACATTCAGCAACATTAC
CACAGAAAGATTTATCTTTCCATCAACCAATTGATGGGAATTTACCCTCTGCATTGTATA
GGCCAAATAGTCTAGAGCAACTGTTTAATTCACTTCAAAATGGTACAATAGATAATGAAA
CCCCCGAAAAAGATTACATGAATCAAATACTTGATGATATTGGATCCATCTACACTTTAC
AGGACATTGAAACTAGACCATCCATTGCTGCATTCAGGTCATGTAAATATGATATTTACT
TATCACAAGATGCTTTAAATATGTTGAAAGCATATTTAGCCAAACATGGACATGTATTAT
TAATACAAGTATTGCAAACATGGTTTCATATTGATATAAATAGTGATAATAATAAAAAAA
ATTCTGAAGACGAAGAAGAAATGGAGTCTGATATGACAGTTAATAGAAATTTTTCTGAAG
AACGAGTCATAGAAGCAAACGACCTGTTTTCTAAATGTAATGGCCATGCTGAATATCAAA
CTGTTGATAAGGAGTTGCGTGATCTCCAAGATGCAATCAAAGGAGTTAGAGACTCAACGG
CTCCATTAAAATTGTACAAAATATCAGCACCGGATACGCATTTAATATGTGCAAAAACAG
ATCCTAGCTGTAACATGCTGTGCGGTGGCTTCATTAATTCTGAAGTCAGAATCTGGGATC
TTGGCCAAAACAATATGCAAAAAAGGATCAATCATAACATATCAAAAATTGAATTAGCTT
GCAACATGCCACCAGAATCTTCAAACGATCATGATACATTACAAATTGGCGCCGGATTGC
CCCTGAGAGGCCACTCAGGCCCAGTACAAGCTGTGACTATTATGCCCAGAGAAGAATTAA
TACTCTCAGCATCACACGATAACACAATGAGAGCTTGGAGACTGTCTGATTATTCATGTG
CTGCAATTTACAGAGGACACAATTATCCTATATGGTGTATGGACATATCAAGAAGTGGCC
TATTTATAGTAACGGGATCTCATGACAGAACAGCTAAGCTTTGGTCTTTGAATAGAACGT
TCCCAGTGAGAGTGTTTGTCGGTCACATGTCTGATGTCACTTGTGTGAAGTTCCACCCGA
ACGAGTGTTACATAGCGTCTGGCGGCGCGGACCGCAGCGTGCGGCTGTGGAGCGTGTGCG
ACGGCCGGCTCGCACGCGTCCTGTGCGCACACCGCG
(1836 bp)

- SilkBase 1999-2023 -