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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp3945_c0_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_threonylcarbamoyladenosine_tRNA_methylthiotransferase_[Papilio_machaon]
Ontology
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0008033 P tRNA processing
GO:0008150 P biological_process
GO:0009451 P RNA modification
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0035598 F N6-threonylcarbomyladenosine methylthiotransferase activity
GO:0035600 P tRNA methylthiolation
GO:0043412 P macromolecule modification
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0061712 F tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase
Transcript
Level		FPKM:7.86 TPM:7.91
ORF EntryO_BomoSK1160_internal:A_BomoSK_comp3945_c0_seq1
Sequence
(Nucleotide)
CAAAATTTGAGGATGCCAGGTGTTTGTGATGAAATTATAGACGACATAGAAGATTTGATA
TCTTCCCAGGATATAACTCCTAAAGAACGTTATGCTAGTAGGAAGAATGTAAGCGTCCGA
TCTAAAAAGAGGGAGAAAAAAGACCCCGAACAGATTGAAAAGGTTATATTAGAGAGTGTT
GTACCAGGCACTCAAACAATATATGTAAAAACATGGGGCTGTGCTCATAACAACTCAGAT
TCAGAGTACATGGCCGGACTGCTGGCTGCTAATGGCTACAAATTGACAGAAGACAAATGG
GATGCGCAACTTTGGTTGTTGAATTCATGTACTGTAAAGAGCCCGGCTGAGGATCATTTC
AAGAATGAAATTGAGCTTGGTCAGAGTCGTGGCATACATGTTGTTGTAGCAGGCTGTGTA
CCGCAGGGCGCACCAAAAAGTGGCTACCTACATGGACTCAGTATAGTTGGTGTACAACAG
ATTGACAGAATTGTGGAGGTCGTGGAGGAGACTTTGAAAGGTCACACAGTCCGTCTGTTT
GGTCAGAGGAAAACAAACGGTCGTAAAGCGGGTGGGGCTTCACTGCTCCTGCCCAAAGTG
CGCAAAAATCCTTTAGTCGAGATCATAGCCGTGAACACGGGCTGCCTGAACCAGTGCACA
TACTGCAAGACCAAGCACGCCAGAGGAGAGCTGGGCAGCTACCCTCCGGAAGAGATCGTG
GAGAGAGCACGACAGTCGTTCACCGAGGGAGTTGTGGAGATATGGCTTACAAGCGAGGAT
ACAGGAACCTACGGTCGTGACATAGGAACATCTCTGCCTGCCCTGCTCGATGCGCTAGTA
TCAGTGATACCGGACGGCACGAGGCTCCGTCTGGGCATGACCAACCCTCCCTACATCCTG
GAACACCTGCCCGCTGTCGCGAGGATCATGAGGCACCCCAGGGTCTACAAGTTTCTCCAC
GTCCCTGTGCAGTCGGCCAGTGACCAGGTACTGTCCGACATGAAGAGGGAATACACGCGA
GCCGACTTCGAACACGTGGTCGACTATCTCAGGAAAGAAGTCCCCGGCATCACGATAGCC
ACAGACATCATCTGCGGCTTCCCCACTGAGACCGAAGCTGACTTCGAGGAGACCATGCAG
CTCTGCAGAAAGTACAAGTTCCCTTCGTTGTTCATCAACCAGTTCTTCCCGAGACCCGGG
ACGCCGGCTGCCAAGATGACCAGGGTACCTGGTCAAGAAGTAAAGAAACGCACAAAATTA
CTGTCGGACTTCTTCAGGTCGTACGAACCTTACGGTCACAAGGTGGGGGAGACGCAGGAG
GTGCTAGTGACCGACGTGTCGCACGACAAGAACTACTTTGTCGGCCACAACGAGTTCTAC
GAGCAAGTACTGATACCTAAGGAGGAGAAGTACATGGGGAAATTAGTTACAGTAAAGATT
ACGAGCGCCAGTAAATTCTCTATGATGGGTCAGCCCATAGACAAACCTAAGATGGCGGGC
TTGACGGTGCCTTTGAAGAAAGGAGAGCTTTCCGGTGTCTATGGTTTGAAAAGGGAAAAT
AAAATACCTATCCCTATACTTGTGCTGTTGATGGTTGTCTTAGCTAGATTTATATGG
(1617 bp)

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