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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp3934_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_translational_activator_GCN1_[Bombyx_mori]
Ontology
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005844 C polysome
GO:0006412 P translation
GO:0006417 P regulation of translation
GO:0008135 F translation factor activity, RNA binding
GO:0016020 C membrane
GO:0019887 F protein kinase regulator activity
GO:0019901 F protein kinase binding
GO:0033554 P cellular response to stress
GO:0033674 P positive regulation of kinase activity
GO:0034198 P cellular response to amino acid starvation
GO:0036003 P positive regulation of transcription from RNA polymerase II promoter in response to stress
GO:0043022 F ribosome binding
GO:0044822 F RNA binding
GO:0045859 P regulation of protein kinase activity
GO:1990253 P cellular response to leucine starvation
Transcript
Level		FPKM:5.39 TPM:5.42
ORF EntryO_BomoSK1153_complete:A_BomoSK_comp3934_c0_seq1
Sequence
(Nucleotide)
GGGATCAGGTAGGGCAGCACCGCGCGCGACTTTATCGACATTATCTGCTTGAGTCCGTCG
AGCGTGGCGTCCGCGACGGCGGGGTCGGGGTCCTTCAGGCCCTCGAGCATGTAGGGCAGG
ATGTCGTCCAGCGCCTTGTTGCCGATGGTGGCGTGCAGACTGTCGAACGTGCGCGCCGCA
GCCAGCCGCACCTCCGGCAGCGGGTCGCACAGCGCGGTGCGGACCGTGGGCACCAATCCG
TCGGCGAAGCTGAGCACGGCGTCCCGCGAGGTGGAGGCGAGGATCTCCCCGAGCCCGATG
CAGACGCCCTGGCGCTGGTCGGCGCGCGGAGACCGCAGCCCGCGCTCCAGGATGGGCACT
ATCTCCGGCAGCACGCGCTCGCCCAGCTTCCTGACGAGATCTCCCAGGGTCCTGGCGGCA
ACCTGTCGCTTGTCGTAGCTGGTGGAGGCGAGGCATCCGAGCAGCAACCCGAAGAGGGTC
GGCAGGATCTCGCGTAACGTCTTGGGAGTGTTGGTGACGACCACCTTCCAGACGTGCAGC
GCGGCCTGGCGCACCATGAGCGCGACGTCGCTGCGGCCCATGTAGAGGCCGGCCAGCACG
CGGTTCCTGCGCTCGGGGCCCAGCGCGGTGATGATGGCCTTGTGCGACTGCTCCGTGCCG
AAGTTGTCGTCCTCCGAGGCGGTCTCGGTGCTCATCTTGCCGGTGACCCCGGAGATGCGG
TACAGCAGGTCGCCCAGCAGCTGCACGGAGCTGTAGCGGATCCTCCAGTTGTCGTCGAAC
AGGCCCTTCTCGAGCTCTGGCAGCAGCAGCGCGATGGCGGACTCCGCGTACAGGTTGACG
ATGCGCTGGCCGGCCCGCAGCGCCGTCTCGCGCACGTACTCGTTCTCGTCCGCCAGCGCC
TTGAGGATGGGGTTGATGATCTGGCCGATGTAGGGGGTGAACTCGTCGGTGAAGGCGCCG
GGCATGTAGATGAACATCATGATGTAGCCGTCCTTGACGTGCGGCGCGATGTCCGTGCGC
TCCGCCGTGGCGATGATGTCTGGCATAATCTTGTGCAATTTTTGCACTCCAAGTCCAGCG
ACGACTTCGGAGAGTCCCTGGGCAGCACCGGAGCGGTCCACGGAGCTGGTCTCCGAGGTG
AGCGTGTGCATCAGCCACGGGAGCAACTCTTCGAAGCTGCTCTCTCCCATACCCTTTACC
ATAGCGCCGAGGGCTCGCGCCGAGACGCTGCGGACCTCCGGCACGGGATCCAGTAGAGAG
CTTTTCAGTCCCGGGATGATGTTCGGGAGATAGGGTGTGAGGTCCTTCTGGTCGGTCAGC
GAGTACATGTTGCCTATGATCTGCGCCGCCATCTTGCGGGTCTCGGTGCTCCGGTCCAGG
AAGGCTCGCTGCACCACCGGCATGATGAGGGCCAGCGACGGGGCGTCGATGAAGTGGACG
AACTTGGTGTCCAGCAGCGTCTGCAGACACGCCGACGTCTTGTTGGACGGGTCCTGCAGG
GCTTGCAGCAGCACCGGCACGATGGCTTGGATCTCGGGGTTCCTGATGACGGAGCCGATG
ACCTTGAGCGCGGCGGCGGCGGACAGCTGCACGCGCAGATGCGAGTCGCTCAGCACCTCG
ATGAGGCGCGGCACGATGGACGGCAGGCACGACGACAGCTGCTTGGGCGCGCAGTACGCC
ATGGCGCCCAGCAGCTCGATGGACCCCGCTTTAGTCCTCCAGTTGTCGTCGTTGACGGCG
TTGAGCAGGGCGGGCAGCACCAGCTTGACGCCGTGCGCGCTGAGGCGGCTCATGATGAGG
CGCGCGGTGTCGTCGGCGGCGGTGCGCACGTACTGCGAGCCGTCGCCCAGACACAGCAGC
AGGTGCGGCAGCACGTGCACGATGTACGGCTCGAACAGGCGGCCCAGCACGCGGCACAGC
AGCTCGAACCCGAACAGCGCGCCTTCGCGATACTTGTAGTTCTTCTTTTCCTGTATGGCT
TCTGTGAGTTTCCCCATGATGTCCAGCTGCTTCAGGGACAGGATGCCGAGCCCCTTGACG
ACGCCGGCTATGCCGTACGCGGCGCCCCTTCGATCTCCGAATTTCTCGGCGGTGAGTAGT
TGTTTCATCAGCTTGTTGACGATGCCCGGGATCTCGCTCTCCAGCGCCGGTGACGTCACC
AGGTGCGGCAGACAGTTGCCCACCGCCTCCTGGACCTGCTCTCGGGGCACAAGGGCGACG
TCTTTAAGCGGAGCCGTGACACATTGGTTGTACGCTCGGCCGG
(2263 bp)

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