SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp3896_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_protein_FAN-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006672 P ceramide metabolic process
GO:0007165 P signal transduction
GO:0012505 C endomembrane system
GO:0016230 F sphingomyelin phosphodiesterase activator activity
GO:0019898 C extrinsic component of membrane
GO:0043065 P positive regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
GO:2000304 P positive regulation of ceramide biosynthetic process
Transcript
Level		FPKM:5.04 TPM:5.07
ORF EntryO_BomoSK1122_complete:A_BomoSK_comp3896_c0_seq1
Sequence
(Nucleotide)
GTTCGTATCTCTAAATATACCTATTAAATACATCAAAATATCACATATTTAGTCTTAATT
AAAATAAGATCAGATTGAAAAAATAATAATACTGAACAAAAAAAGAACAAATTGATCGTC
AAGACGCTTGTGTTAATTTCCATACTTTAACTGTTCTATCTTCACTGGCTGTTAACAATG
TGTTCGAGGCCTCATCGAAATAAATATCGTTTATTGATCCGTCGTGTGCATTCAGCTCCG
CGTTCTGTGCTACAGTGAGCATGTTCCATTGTCGGAGCACGCCGGACCCTCCGCCAATCC
ACAATAAACTATTACCGTCCCAGTACAGCGACCTGCCGATATCCGGTAACTTCTTCTGGT
AGACCGAATGCAGAACGCTGAGATCGGTAACAGTTATGTCTCGCTCCGTATTGGCCGTGA
CAATCCTATCTGCGGATAGTACGAAGCAAACGCAGGTGATCTCGGAAGGGTGAGCAGAGA
ACTTGGCAATCAGACCTTTATTATTCAAACTCCATATGAAAAGTTCACCATCCGAAGTGC
CCGTTATTACATCAACTTCGTGTCGACGTCTTCTGTGAGTCAAACAGGTTATCTTTCCGT
CGTGATCGAATTCCATTTTGAGACCCCGGAGTGCTTGTCCAGTCTTTCCAATGTTACCCC
ACACACGGACAACGCCGTCGCAGCCGCCGGATATTAGAAGACGTTCTTTATGCAGCCACG
TGAGGCAACTGACAGAATCATCGTGAGCTCGAAAACTTTCCACAACTCGACCGTACTCCA
CGTCATATAGGTATATTTCATTGTCCCACGCTCCAACGGCGACAACGTTATTATCAACCA
TCACGCAACAACTCAACGGCGTGGGCGACAGAGCCACGCTTCTAATCTGCTTCCTCTTCT
CGGCATCATAAACCTTCAAAGTCCCGTCTCTTCCAACAGAAATAATCCTTTCCGATTGAC
GGACAACACACGTAACCGACTCTTTATGCAGCCTTATAACGTCAATGCACTCGATTCGAT
AGCTCCGGTTCATTTCGCAGCACATGGGCTTGGCGATCTGAGGCGAGATTCTTCGGACGT
GCGGCTTCGTGAACAGTTGTTTCGGAACTTGACCAAACTCCATAATCTGCACTTCCAGAG
CGTGTCTGTCGTTCATATCGTAAATGCATTCCAAATCGACCGAACCTTCGTAGCATACAT
GGTGGAATACGTTCTCAGCCTTAATAGCTTCTTCGCCTCTTTGTTTATAACCAAAAATCA
AATCGATCCATAAATGTATGTGTTTGGACACATAATTAGACTCTAAAGCGTCTCTCAGCT
TACATACGAAGTCTTCGGGAGATTTCGCCCATGGCGGTAGCGCCACGTCATTCACTTTGG
TACCATCATGTCGGGAACCAAAGTCTATTTCGAATTTGTTTACCAGGAAATCCCCTTTCG
CTTCTACATCATAAAATTCTGGAACTAATTCCTGTTAACAATCATCTTAAATATTTCAAT
GGAAAATTTGACCACAGCCGAAATCTTCGTTCATCTCACAATCTTCTTCTTCGCTGTCCT
CCACATAGTTCTGACTTTTTACACTCTTCATTCAATATTCAATCTATTCTTCTATGGAAT
GCGCTCCCACTCAAAATAAGGTCGGCCACTACACGTGAAGCGTTTAAGACGAAGGTTCGA
GAACTGTTTCTCAGAGAGTTAGCAGAGTCATCTAATTGATAATATTTGTTTATATATGTT
TTATATGT
(1748 bp)

- SilkBase 1999-2023 -