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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp3843_c0_seq1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_symplekin_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005848 C mRNA cleavage stimulating factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0006398 P mRNA 3'-end processing by stem-loop binding and cleavage
GO:0035363 C histone locus body
Transcript
Level		FPKM:8.13 TPM:8.18
ORF EntryO_BomoSK1058_complete:A_BomoSK_comp3843_c0_seq1
Sequence
(Nucleotide)
GGCGCCTTGTGCAGCCCGCCCAGCGCCGCCGCCGGCAGGGACGTCAGCAGACCGAACGAT
GCCGGCATCAGCCGCTCGCAGCTCTTGATCCAGCCCTCCCACGCCACCTTGTTCAGCCAC
GCCTCCTTTTCAATTAGCAGCTGCAGGATGTTCATGACGAGCGGACTGAGGGCGGGGTAC
AGGGTGAGGCTCTGCAGCACGGTCCGCATCATCAGAACAGGGATCTTCGGCTCCTCGACC
AGCCTCTGCAATACTGCTGCCAGGACGTCTTGCGTGTAAATGTTTTTCTCGGCGAAGCAC
AGAGCCGTCGCCTTTATGATGTACTTCAGGTCCGCCTTCTCAGGGTCGATGAGGTGCAGC
TCTAGCAGCAGTTCCGCTGGTGACACGGGCGACTGCTCGTCGTACGTGCCGTTGATTCCC
AACAGCTTGTTGAACACCTCCTTCACGACGGCAGGGTTGAGCTTGATTAGTTTCGGTAGG
GCTGCCACGATCTCTCTCTTTGACAGTCCGGTGAGCACGGGGATCAAGAATCTAACGTCG
GACACTCTGGTGGCGTATATGTCTCGTACTTTCGACACTAGTTCGGCTGTTGGAGGCACT
TTCTCGGTCAGTATATGCACTAGTCTGGTGAGCAGAGTCTCTGCTCCTCGGGGACAGTTC
TCGAGCAGTTCCCTGAAGGCGGGGCGCAGCGTGGCGTCGTCCTCGTCGAACTCGTTGTCG
GGCAGGTCCTTGGACACCATCGCCCGGATCGGACCCTCGATGGTTCGCAGTACAACGCGC
TTCGCCTCTGCACCGGAGCTGCCGTATATCCTTGCTATTTCCATCAGTAGTCCTTCTTTT
TCTGGGAAGAGCGCCACAACTAAATTCAAGCACAGCTTATGTAAATTCTCATTCCACATG
ATCCTAGTTCTGGTGCTTGAAAGTTCAGGGGGCGGATGATTCAACGATATGAACCCTAAG
TACAGGAGAGCGTGTTTCTCGATGACTTTCTTAACAGCTTCTGAGCCACGTTTGTAAACT
TTGATGGTAGCTTTCAAAGCTATATCGCGGATTTCCTCATTTTCGCTCAAAACATGACAG
ACCAACGATGTCACATATTTGTGTGCCCGAGGTGGTCTCATCAAACACAATTCCTCTAGC
AACTCCAAAGCCAGCAGAGCCACCTGATCTTCAGTGACCAAGTGCTTCAAATAATCCAGG
GCCTCGTCCGTGATCACCGGACTCTCCAAATATATCTTCCTTAGTAAAACATCTTTGCAT
CCTTCCATGACAGGGTCGCCTCTCTCGGATATCTGGGTGACCAGAGCACAGAGCAACTGG
TTGTAGTTTTGATCGTGCTTCTCGTGCAGTTTCGGTTGTAGGGTCACCGGATGTCGGTTA
AAGCCCTGCATGAATGCGTATTCTTCATATAACCACTTCAAAGCGAGGTTGATGCGCTCG
GCGGGATTGTCTAAAATGTAATTCAGTACTAGATCGCGCGTTTCCGGCGTGTAACTCGAA
GCGAATATCGTGATGAATTTGGCCCGGATCTGTTCGGCTCCACCGATAGCGGCGTCTTTT
TCCGCATTTAAAATCCTCTCAACGGCCTGCAGTATCAACTTTTGCTTTATTTCTTTTGGG
ATGGGCCGTGTTATTTCCTGTAGTTTCAATAGCTTCACTTTCTGTTTCAGTTTAGGCACC
GTCGGAGTAGGTGGAGGAACCGGTTTCTCTTTCTCCTTTGCTTTCCTCTCTTCCTCCTTC
AAATGTTCCTGTCTCGTTTCTTCCATTAGTTTAGAAACCGCACTCTCTATCTGCCTGTCT
TTTGTTGACTCTTGTAATTTAGCTACAGCATTTTTGAGGGTAGTTTTCTCATCATCTTCC
CTTATTAACGGTATTTTCGCAGCTATATCGGATAAGCTCTGTTGTAATACTGTCTGGTTA
GGTTGTGTATCTACCTCCATTGATTGTGTAACTATTTGTGTATTTTCTGATTCACCTCTT
ATTAAGCTCATCAACATTTTAGCCAAGTTCTTCTTTTGTACTTTGCTACCAGAGTTAGGT
ATTGGCTTGTAATCATTTGTGAACGAGGGCGGCATGTTATCTGGTAGACAATTCTGCAAT
GTTTTCATGACAAGATTAACAACATTGTCCACAGAATTTAAGCCTTCGAGGATACTGTCT
TCTGTTGCCGAAGGCTTCGTGATGCTTGACTGGCTGTCATCGTCATACATGAATTCACTA
CGGCTGTTACTGTCGCTACCTTGACTATTACTTTGAGGTGAATCGATTCTGAACCGTTTA
GATGGTGTATCCCCATTCCTAATTTCCCCTAAGCGTTTGTTTCTTTTCTCTTTCGGTACC
GCCTTATTAATCTCTTGTGCTGTCATTCCGATATCAATTAGCAATTGTGTCAACTGCGGC
ATCATCTCATTAGAAGTTGATTGTTTTATTAAATTCAATATCTGCATTTTGAGATGTTTC
CTGACTGAATTGACTTGAGACTGCGATAGAGTTGGAGGTAGTGTCGTGTGAAGATCGCCT
AGTGCTTGTATGACTCGGGGCAAGTATTTAGGACGGAATTTTGCTAAAGAACATAGCGTT
GTCATACAAGCCATCAGGTTTACACTTGATATGTGCTGTGAATTATGAAATTTGACCAGT
AGTTTGAAGATATGGTCAGATTCCTCTTCGAGAGCTTTTCTATTGATAAAAGGAACATCT
GATGGTAGACTATCCAAGCTGGATTCAGCATCAACAATGTCACCGGGACTTTGCCGGAGC
ACAACCTCTTCCAGGAACTTAATGGAATGCGTTCTGATACCTTCATTCTCACTGTCGATC
ATGTTTAAAACCATCAACTTTAATTCAGTTAAATGTTCCCATACATGTTTCATTTCCGAT
ACTTCAGCGTCACCTTTACAGATCCACATTAACGTATTACGGTACAGTATACTGGCTGCT
TGGATGGCCCTCTTCTGCACCGCAATGACTGGGTCAAGGAGTAGGAGACGCAACTGAGCG
ACAATCTTGGGAAGAAGTTCAGGGTGACTTTTACTCAACTCTTCAACAAAATACGCGACC
TGCTTCTTTACGTCTGTATTTTTATCGCTGATGTAGCTTAGTATATTCTCCATGTATACT
GGAATCATTTGCGAGCCTTGATGTAGCAGAACTTCTATGACTTTTCTCAATAAGCCTGCT
TTTTTGTTTCCTTCCGCCATTCCAGTATCGTTTATCCATCGTATTAGCTGATTTTGTACT
GTAGTATTAGACGTGTGTCCGTGTTTATTCGACATTCTGTATTGTTCATATAATAAACAA
TTCCATTTATTATTTTATTTACAATATTTTGCAAAATTTTCAACGTAAGAAAAGGGCATC
AAGAAATACGGTGATTATCAAAAT
(3384 bp)

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