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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp3822_c0_seq1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_probable_cleavage_and_polyadenylation_specificity_factor_subunit_2,_partial_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0006398 P mRNA 3'-end processing by stem-loop binding and cleavage
GO:0022008 P neurogenesis
Transcript
Level		FPKM:7.16 TPM:7.20
ORF EntryO_BomoSK1031_complete:A_BomoSK_comp3822_c0_seq1
Sequence
(Nucleotide)
TTCTAAAGAGTTTAGCTAAACAAAAACGTCTTTAAAAATATAATTTACTAATAAATGTTA
TATCATTCGGCATTCTAATTGAACAATCACTACCGTACCTGCATTAAAACAAAATTAGAT
AATTATAATATGCAGTAAACTACCAAATAATAGTACAAAATGACTTCAATAATTAAATTA
CATTGCTTATCTGGTGCTGGTGAGGAAACTCCTCCGTGCTATGTGCTCCAAATAGATGAA
TTCAAATTCCTCCTGGATTGCGGATGGGACGAGAAATTCGATATGGTTTTCATTAAAGAA
CTTAAAAGACATGTAAATTCAATAGATGCTGTACTAATATCACACTCGGATCCTCTACAT
TTAGGAGCTCTTCCATATGCAGTTGGAAAACTCGGTCTTAGCTGTCCAATATATGCAACT
CTACCGGTATACAAAATGGGGCAGATGTTCATGTACGATTTATACCAAGCCCATAAGAAT
GTGTCCGAGTTCGATTTGTTCACACTGGATGATGTTGATATGGCTTTTGACAGAATCGTA
CAGTTGAAATACAATCAGAGCATTGAAATGAAAGGAAAAGGTCTAGGTCTCCGCATTACA
CCACTCCCAGCTGGCCATTCCCTTGGTGGAACAATATGGCGCATATCCGCCCCCGGCGAG
GAAGATATTGTTTACGCGCCTGACTTCAACCACAAGAAAGAGAGACATCTGAATGGATGT
GACATCGAAAGACTGATGAGACCCTCTCTGATGCTGTTGGGAGCTATGAATGCTGATTAC
GTGCAACAGAGGAGAAGACTGAGAGATGAAAAATTGATGACAACAATTCTTACAACGCTG
CGAGGAGGCGGTTGCGTTTTGGTATGCACAGACACAGCCGGTCGAGTCCTAGAATTGGCC
CACATGCTGGACCAACTGTGGAGGAACAAGGATTCCGGGCTCGTGGCCTATTCGTTACTT
CTCCTGTCCAACGTCAGTTACAATGTCGTAGAGTTCGCTAAATCTCAGATAGAGTGGATG
AGCGACAAACTGACGAGGGCGTTTGAAGGGGCTCGCAGTAATCCCTTTGCTTTGAGACAC
GTGCAGCTGTGTCACTCGGCCGGTGACGTCACTAGGACCCCGGGACCGAAGGTCGTCCTG
GCCTCGTTCCCGGACCTGGAGGCGGGCTTCGCCAGAGACCTGTTCCTCCAGTGGGCCCCA
CACTCCCACAACTCGATCGTGCTGACGGCCAGAACATCCCCCGGCACACTGGCAAGAGAT
CTGATAGACAACGGGGGGGACCGCGTCATCGAGCTGGTGGTTCGACGGAGGGTGAAGCTG
GAGGGCGCCGAGCTCGAGGAGTTCCTGCAGCAGCAGAGAATGAACGTCACCAATACCGTG
AGGGAGGAGGTGGCCGGCATCTCGTCGGACTCTGACTCCGAAGACGAGCTGGAGATGTGC
GTGGTGACCGGGAGACACGACATCCCCGTGCGCCTGGAGACCAGGCTGGGCGGCTGCTTC
AAGTCCAACAAGCGGCACCACGCCATCTACCCCTTCCACGAGGAGCGGACCAGGGCTGAT
GACTACGGAGAGATCATTAAGCCAGAAGATTACAGACTTGCCGAGATAGTGGACGCCGAA
GGGGAGATCCGGGACGTGCCCCCCACTGCCCCCATCAAACAGGAACAAGATGAGGAAATG
TCGGAGGTCCCGAGCAAGTGCGTGTCCTCGGTGCGGCAGGTACACGTCAAGGCGCACGTC
GAGTACATCGAGCTGGAAGGGCGCTGCGATGGGGAGTCCCTGCTCAGGGTCGTGTCGCAG
ACCAAGCCCTGGGCAGTGGTGGGGCTCCGGGCCAGCGAGGCGGCGCTGCACACCCTCAAA
AAACATTGTGAGTCTGAAGGAATCGAAAAGGTGTTCTTACCGTCCGTTGGGGAAACCGTC
GACGCCACGACAGAGTCACACATCTATCAGGTGAAACTGACGGACGGGCTGATGCGGGGC
CTGGTGTGGCGGCAGGCCGGGGACGCCGAGCTGGCCTGGCTGTCCGCCGTCGTGGCGCCG
(2040 bp)

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