SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp3799_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_myosin-IB_isoform_X3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005903 C brush border
GO:0005938 C cell cortex
GO:0007368 P determination of left/right symmetry
GO:0007498 P mesoderm development
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0031941 C filamentous actin
GO:0032528 P microvillus organization
GO:0042623 F ATP hydrolysis activity
GO:0042742 P defense response to bacterium
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0071907 P determination of digestive tract left/right asymmetry
Transcript
Level		FPKM:8.93 TPM:8.98
ORF EntryO_BomoSK1016_5prime_partial:A_BomoSK_comp3799_c0_seq1
Sequence
(Nucleotide)
GCCAGCAGGCCGCGCGCGCGGGCCTTGTAGCCGCGCCGGTCGTACTTCACCGCCTCGCAC
GAGTAGATGAGTTCCTCGCCGCTCGGCCAGGCCGGCGACGCCATGAAGGTGTCCCTCAAG
GTCCTGTGCTCGGGACTCATGCGGTCGTTCACGAACCTCTCCCCGACGCTGCTGAGGTAG
CTGTTCTTTTTACCCTTAAATATTTTTTCGGCCAAGACCTTCAGCTCAAACTGCTTCTTA
TCGTCAGGAGACAAGGCCAGCCTGTACTTCCTGGCGAGGTGGGCCCGGTGCAGGCGATGG
AGCTCCTCGGAGGCCTCTCGGCAGGTGGAGGGGCACGGCGGCCACGACAGGTCCAGCAGC
TTGGTTGGGAGCTGCGCCGAGAGACGCTTCAGCCAGTGCACCTTGGCGACGCCGAGGAAT
CGCCGGTTTTCTGGCGTCTCCGGACCGTTGCGAGTGATGAAGCCTTTAATAAAAGCTCTG
ATGACGTCAGCGGCTTTCCTCCTCCTCTCCCTGAGTCTTTGGGCCAGGAACCTCCTCACC
CACTTCTGGATGACGATGGCCGCGTTCCGCATTCGGAGGTACCTCTTCCTGAGGTAGTAA
CCTCGCCACCTGCTCTGGATGATGGTGGCTATGTCGTTCTTCTTTATCTGGAAGGCGTCT
TCCGTTGCGAAGAGCGTCTTCGGGAATCGAACGAAGATTTTCGTATTCCCCATCCTGTAT
TCCTCTTTCTCGTACTGGAGGGCCTCCACCAGCCGCTGCACGCCGTCCCGCGCGGCGCCG
CGGTAGTTGGGCCACGTCTCCGCGCTCAGGCACTTGTACCTTTCCAAGAACGCTTCGTAA
GTCCTCCTGTAAGCGAAGCCGGCGCGCCGCACCCTGAGGTTCTCCATCAGACCGAGATAC
TTCACCTGGTGGGAGACCAGCTTGTCGTCGAATTGCATCGGCGCCTTGAAGTCGTTGGGC
TTGATGCAGCGGATGTACGAGGGCTCCTTGCTGCTGAGGATCTTGATGAGGTCGTTCAGA
GAATTCTTGAACTGAGTGATGGCGGTCTCCGGACGTTTCTTGCTCCTCAAGTTGTAGTCC
TTGAAGCAGCAGCCGACGATGGTGTTGTCGCTGGACGCCATCAGGCTCTGGATGTCGCGG
AAGAGGAGATCGTTGTTCTTCTCCAAGAAGGTGTTCACGTTGTAAGTCACTTCGCCGGCG
TAGTGGACCAGGCAGAACTCATCACGGCCCATCAGCTTCTGGGTCTTGGTGTCGGATTTG
CGGTGGGACTTGTAGTGCTGGTGGCCGTCCAGATGCTGGTTCAGCTTGTCGAGGAAACTC
GCGTCTGTCGCGTCCCCGGGACGAAGGCACTCGTCGTCCAGTATTGATATTATACCCTTA
TGCCTGGCTTCGATAAGGTCGCAAATGATGATATTGTTGAAGTACTCGACCGGCTCCCAC
TCGATGCCTTCCCGCAGGTACTCCTCCTGCTCCTGCCGCAGCGTGAGCTGGATGAACAGC
TGCTGGAGCTTCTCGTTACAGAAGTTTATGCAGAACTGCTCGAAGCTGTTCTTAGGGAAT
ATCTCAAAGCCGTAGATATCCAAGATTCCTATAACAGAAGATTTAGCGTCCTTCTCGATG
GGCGCAAGCGACGAGTTTAGCCTGGAGACCAGCCAGCTGAAGTGCTTGTCGTATATAGCT
TTAGCCAGAGCGTCTCTAGCGTATTGAGCCTGTTCCACGTCCAGGGGTGTGCTGACGACG
TCGCCGCGGGCCTCTATCGTCCTATTGGTCAGGGCCTCGCGTAATGCCGTCGCGTTCACT
TTTAGGAGATCAGCAGCATTCCCACTGTTGGCGTCGTGGGACAGGATCTCGGCATAGCCC
TTGTCATTCTGGACGAACTTCACGTTGCCGAGGTGCAGGACGCTGGCCACGATCTCAAAG
ATCTCCCGCTGTTCACTCTCGCCGATTTCTATGACCTTCATGGCCTCTTGTACGACACGG
AACTGTTCCTGGTCGTTCGCTCTCTGACTCATGTGCGAGGTCGAATCGGAAGTGTACTTA
TAAGCTTCAGGTCTTCCTTGAAGCTTCAAATGAGTCATCAGTGACTGATCGCTGCTAGCT
AGTAGCTGATAGAATATGTGGAAGTTCCTCTCGCCATGCATCTGACTGACGACCCTGGAC
TTTTCCAGCAGATAGTTCAGGATGTGACCACCTTCGGGCCCGCCTTCGTAGTTGAACTGG
ATGTCCATGTATTTGCCGAAGCGACTGGAATTGTCGTTGCGGTGCGTCTTCGCGTTACCG
AACGCTTCGAGCAGCGGGTTGCTTTGTAACAGCTTATCTTTCACGTTTTCCACGTTCCGG
AGGTGGTTCGTTCTGGCGGCTATGTATTCCAGAACTTTCTTCGACGCTTCCGTTTTGCCC
GAGCCGGATTCGCCTGAGATCAAAATACATTGCTCTCTGTGCTCGTAAACCAAAGACCGA
TAAGCGTTGTCGGCGATCGCGAAAACGTGCGGCGGTGCCTCAAAGAATGCTTTCTTGAAG
TAAAGTTTGGTTTTCTCTTCAGTGTAAATCGGTAGATTCTTGTACGGATTCACCGAGATC
AGTACATTACCGATGTAAGTATAAATAATGTTTTCATGGAAACGTTTCTTCAAATTGTCA
ATGAAGGCCGCTTCGGATCGGTAGTCCTCCAGCAAAACGAAGTCTTGGACTCCGACCCGC
TCGCGATGCTGCAGGGAGTGCTCCATCACGCCTTGTACGGAAACTGGCCTAATGAGCCTC
AGACGAACACACGATTATATCTTCGAAAATAAAACAAAAAATCCGAGATGCATCACTGCA
CGAAAGCAATATAACCTGTGTATTCACTTTAGCCTGCCGAAAAACATGTGCTTATCGATA
TTTTTATCACATTAATCAATCATTGATCGAAACAAAAAGCTCAAATTTATGTACTACACT
TTGTAGAAATGCAAATAAATATATTAAAAAAACAGTACTGTTCTCGATATGTTACAAATT
CGGGTTTAAATTAGTTTAATTAAAAAAGTTTGAATCGTATTACGGCCGGTGTTTTGGCGC
GCGACACGAGATTCACGCGAGCGTCGGAGGTAAACTGACATTTAAGCCGACAGAGTCGAC
AGACG
(3125 bp)

- SilkBase 1999-2023 -