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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14276_c0_seq3
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_nesprin-1-like_isoform_X3_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006997 P nucleus organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
Transcript
Level		FPKM:81.74 TPM:82.21
ORF EntryO_BomoSK19822_complete:A_BomoSK_comp14276_c0_seq3
Sequence
(Nucleotide)
GTCGACGCGCGGACGTCCCGTCGCGAGGACGCTTTCGCCGATCACATGAAAACGCGAACA
AATAAAACGAACAATACCGAAAAAACACTCGAATACTAAATGAAAAACGATTAACATTAT
AATGGCGCGTTAATTTTTGTGCAAAAATCCGCGTACTCTCCTATAAGTATATATCTCGTA
AAATAACAAGGTCAGGTTGTGTGGTGGAAACAAACTTATTCGTCGTATGCATAATTTTAT
TTGAAAATTAAGACGATTAAACTTTGTTTATACAGTAATAGCCCTGACCTTAGAACACGA
TCGTGACTATTATCAAAAATCAATTCTGAAAAATTTTTACGAATTAGGTTTATCAGAAAC
TGAATGACATCAGGTGTAACAAAGAGTTTGTATTTAAAATAATAATAGTAATATAAAAAT
CAAATCAAAAATACCCTCAAATTACCATGACAATTAACAATTCAAAGCTAAAAACTCGTG
AATCGAAACACCGCTAATCACTTGTGATATTTTATAACTGTCCTTGTCAAATGTGTGATA
TGATTTTGTTTTTTCTTTATTATTATGGTGATGCGATAAGAAATATGTGTCAGTGGCTCG
CTGTGTGATTTATTATACGAAAATGTCACTTCAAGAGGCATGCTTGGAACAAGAAGCCAG
GGTAGCTGAACTCCGATCATTGGCGGCGAGAGTCGCTGCAGAAACTGGATCTAGGGCTCT
CCAGGCCGACGCTGACGCACTGGCCCGAAGGCTGCAGCTGGTCGCCGGCGCTGTCCAGGT
CCTGGCGGATCTGGGCGAAGCCCGGCAGAGCGCACGAGCTAAAGCGCAGCACGCCAAAGA
GAAACTATGTGACATGAGACAGGACTTGGCTCCGCTGCACGAAGACGGAGAAATCGTTGA
AGACAAACTGATAGCGTTACGAGAAAACCTTATCGCGCTGGGTAAGAGTGAAGCGGACAT
CGCTCCAGCCACGGCGGAACTGCCCGACATCGATAGAGACGTTTCCGAAGAACATTCGAT
CGTTAGGATCTTGGAACTATGGCAGGCTATGTTCAGAGACACATTCTTGCATTACCACAG
GCTATCGACCGCCCTGGTTAGGTCTGGTGATGCGGCCACTGCGCTCAGACTATGGCACGA
GTACTTGATCGACTTACAGTCGTTCTTGTCAAGCGGAGTTCCAACAGATTACGAAAACCT
AACAGAGCACAAACGTCTGTGCAGGGTTCACAGAAATCTACTCACTTCGCAACGCTCAGT
CCTAATAAACGAAAACAGGGATACTAAGAATAAGGACTTGGCCGACAAATTCGACACCCT
TACTAATCTCCACAATGAAACCCTAGCGAGAATTGTCGAAAGACACGATGAAGTGTGCGC
CCGCATCGGAGCCTGGGACGACTATAGAGAGAATTACACAGAACTATTGAGATGGCTTAA
AGAAATGGAACGCGAAAAAGAAAAGCTGCAACTCAGATACGTTCACATGAAGAGGATACA
CAAGATCTTATCCAAAATACAGAATCTCGCTGACAAAGTGCCCGAAGGCCGCAAACAGTC
TGATAAACTTCTAGTCAATCTCAAGAAAGTCTTACAGTTTACTGAGGAAGCTTATGGAGC
CTCCGTCAAAATGGAATACGCCGGGAGTGTGAAGAGAGTCGAGAATCTGCAAGCTAGCCT
CGACACATGGAGAGACTTCTTAACTCGAATTCTAGGCCTGATCGGTGAATACGAACGCTT
GACAAGTGATTTACACAAAATGTACTCAAAGACACAAGACGACATTAGTTCATATACTGA
CGAGGAGAAATTATCTCGACCGCAACTCAAAAAAATTATTGATAAATATACAGATTTACG
GACAAAGATCGAAAAGAGCGAAACGCAGATTGAGGCTTTGAGCGTCATCCAGGAACAGTT
GAAAGAATGCCTGAGTCCGCAGGATATGAGAATAGTGAACCAAAGAATATGGCAACTGAG
GCAACAACGCGCTGACCTTGAACATCAACTATCTATCATCATTCACAGACTTCAAGAACG
ACTGGAAATTTACGCCATATTTGATACGCGATTCAAACGATTCACGGAATGGATTACAAC
TGTCGAAACGCGTTTAGAGACTTCGGGCAGTAGCAGTAGCGACATCACCGCTTTAGATCC
CCACGATTTGATCAGAAGGCTAAACGCTGATGTTCAAGCAGAAACTGCTATGAAGGAACG
TGAATTTGAATGGCTCTCTGAAACCGGTAGCTCTCTTATAGAGGTAGCAAAGAAAGAGGA
AAAGTCATATAGCAAAAACACGTCAAAACAGTTGAAGGACATGGAAGAAAGATGGCGAAA
ACTCCAGGAAACTGGTAGATCTAGAATTGTGAAAATTACTGAATTACTAGAAACTATAAC
ACAGCTCGAAGAGAGGCTTACAGAAATCAGAATAAAACTACACGTCATAGAGTCGAAATT
GACAACGACTGTTATCTTAGAATACCTAACGACAAAGAGCGTGGATGAGAAATTCAAAGA
ACGAGACGATACACATAAAGAAATTGAAGCCGAAAGTGGAGAGGTGTGTGAAACTTTGAA
TCTCTGCGATCTTGTGTTCAACGACCCCGATGTTCTCAAAGGTAACTTCGATCTCAGAAA
CTTAAGAACCGGAGTGGACATCGTCGAAAAGAAATGGAAAAATATTTGCGACACTTCTGA
ACATCGCAAGAATACGCTGAAAGAAATTCGTAAATCTGCCGAACTATCTTCGTCTGTTCT
ACCTAAATTCGTCAAGAAACTCGATTCAATCGAGAAGAGAGTTGAGAAAATTGAAACCCG
AAAACAACGTGGTGAACATGAAGATGAAACGGTTTCGAAGGCCGTAATTAAAGACTTGGA
AGCATTAGAACCCAACCTCAAGCGGATAGAGGACGCATACAGCCGCGTAGCGTCTGCAAG
AGGCGTAGAGCTTCGTGGCCAAGGGGCAGACGAAGCTGCCAAGATGCGGTCGGCGATCCG
TCGCTGGCAACAGCTCAGGGGCAGGGTAGACGCCGCTGGCGCAGACGTCCACAGACAGTT
CGTGGCGGCACACGGAAAAGCAGTCGTCGCGTTGGCCGAAGTCGACGTCAGACTGACCAG
AGCTCTGCATCTTGCTCCCACTCCCTTGGACAAAGAGGCCACCTTAAAAGAGCTAGAGTT
GGTTGAAAAAGAACTGGCTGAATGTCAAGCATTAGTGGATGACGCCGATCGCTTGGCTGC
TAAAGTCTCGACAGCGCAAGGCGTTTCTGAAATGGTCGCAGAGTACCGCGCCTTATATGC
GGATGTCAGGTTGCGACTGGACCTGGCCAGAGCAGAGGTCGTCGGCGACGTGGACACCGC
CGTTCAAGTTGACACTTTAAAATGGGAGACGGACGCAGCCCTACAAGTAGACACCCTCAC
CTCGAAGGAGACGTACCGAGCTGAACTGGCGTCGGCCGTGAGGGACACCTCGGAGGCGCT
CGAAGTGCTGGAACTCGCGTTGCAGCAGCAGCTCAAAGACAACGCTGGAAGCGACGAACT
GGCCGCGGCCGCAAAAGAAATCGCCAAAGCCGGAGCCAAGCCCGGACAGACCTTAGAGCT
GGCCAAGCACCTCTCGGAGCTGCTGCTGACCGAGTGCGACGCGACTGAGGACGAAGCCAT
GATGAAGGAAGTTGAGTCTCTCTCGTTGCGGTACGAAGACCTGTTGACGCAAGCCAAGAA
GAGGGAGCTCCAAATCAACAACCTGAGGTTGCCCCACTCCGCGTCATACGCGCTCACGTG
CGAACACGAGTCTGGTAGGCTGACCTGCCCACTGTGCTCGGAGAGGAACTGGAAACAGCT
GGACAATGACCTTTGGCGGCTGGAGCAGTGGCTGCAGTTCGCCGAAGCCACGGAAGCTTC
CAGAACCGAGCCGCCCGAACAATACGACTTACTCGAAGACGCTATACAGGACCACCGCGA
GTTCCTGCTGGACCTGGACTCGCACAAGTCGATCGTGGTGTCGTTGAACGTGGTCGGCGG
GCACGTGGCGGCGCATGCGCACGACGCTCGTGACGCGGCGCGCGTGCG
(4068 bp)

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