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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14272_c0_seq7
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0016020 C membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036266 C Cdc48p-Npl4p-Vms1p AAA ATPase complex
GO:0046872 F metal ion binding
GO:0071630 P nuclear protein quality control by the ubiquitin-proteasome system
GO:0072671 P mitochondria-associated ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:11.92 TPM:11.99
ORF EntryO_BomoSK19788_complete:A_BomoSK_comp14272_c0_seq7
Sequence
(Nucleotide)
TGACTTAATTGACTTATTGCAAAATTTTTAATCTCGTTGCACAATATTATCGAGTGGTAA
AGCAACCAAGACAATTATTAAAGTATTATATTGTGTATCACTTAAGTAATAACATGTAAA
ACGTGGACATTATATTTCAAGATCAACAATCTGAGCCGATAATGGCGCTGAAGCCCGAGG
CAGTAAAAACTAAAATCGTGAAAGTCTATGAGATCGACGAATTTCAAAAACTCCTAAAAG
GTGTTCATGTGGCAGCATGTATGATAACAGAATCACATAATGTCATTGATGAACAGAGTG
TCTTGCGTCGCCTTAATGCTTTAACCTTAAATGGTGCTTCTGATGGTAATTGTTGTTCGT
GTTGCGGAGTGGGTCCATTCGAGACCCGTGCGCAGCAAACGGCTCATTATAAGCATCACT
GGCACACTTTTAACTTGAAGAGGAAACTATTTGGAAAATCTCCATTATCCATTGGCCAGT
ATAATTCTCGGAAAGATGAATCAAGCAGTGAGTCTGAGGAAGAAGTGGAGGACAGTAAGA
GACCTCCGAGTGACCTATTTGCTGCAGCAACAAGACATTGCAAGGCGTTCTTCACTAATC
ATTATGGGCAGGTCTTCTGTATTTATAGATGTATCCTACATCATAAGAAGGAAGAATTAT
CAACGGATGGTGATGGCAGTGCCTGGGTAGAACGTGTGGAGCAGCTATTGATCCCAGGCT
ATCAAAGATGGGCAGTCCTGATGGTCTCGGGTGGCAGATTTGCTGGGGCAGTTTTCAGTG
GTGGCACTATAGTTCTACACAAGACATTTCATTCATATGTCACAAGGAGAGGGCAAGGTC
AAGCCCAGGCTACAAGAGATGCTCATCATGGACACGCGAGGTCTGCCGGTGCTAGCCTTA
GAAGATATAATCAGGCGCAGTTTCTAGAGCATATCCAAGATATTATAAGTCAATGGACAG
AAGACTTCAAAGGTTGTTCTCTAATATTATATCGGGCTGTAGGATCTTTAAATCAAGCTG
CTATATTTGGAAAGAACTCCCCTATAAAGAAAGATGATCCAAGACTTAGAGTGCTACCTT
TCCCTACTAGAAAACCTACATTTAAAGAAGTTCAGCGGGTTCATTCTACACTTGCTAGTC
TAGAGGTTTACGATTCGTTGGAGTTGTTCCAAAAAGCACTGATAACATCGACAGCTAAAC
CAGCAAATAAAGCTACACTGGATCTTGGTAATGAAAATATTAAGAAAACAGCAAAGAAAA
GTCCTAGTAAAACTATTGATAGAGCAAAATCAAGAGAACGCACTCCTAGAGAGCTACCAA
CCCAGTTGATGTCGAGCGAAGACGAAGGTCCCTGCTTCATAGACTCTGAGACACCTGTAG
GTTGGATCAAAACACTATCGGAACAAAAAACCAGTGGGATTATTATTAATTCTAAAAAAG
TTGTCCTAAACGATTGTGCTATTCAAGATAGGTCAACACCTAGTCCCTGCGAGAGCGAGA
AGGAAGATTTAAAGCAGGAAGTAAAAGAGAAATATGAAACTGATAGGAGGAAAAAGATAA
AAGATCCCGCTGTTCTTAACAAGCCCAGTCAAAAGATTCCTAATCCTATTAAGAAGATGT
GGAAAATGATAATAGGAAATGAATTGAAATCACTGGAGACGATATTCGAAGGCTGGGAGG
AAGAGAATCTGGCGGAGGCTTGTAACACTCGCGATCCTAGCGATGGCAACACTGCGCTAC
ACAAAGCCGCCATTGCTGCGAAACCAGATATGGTCACTGAGATCCTGACTGCCGGTGGAG
ATCCGTGCATCAGGAACAATCAGCTGCAGACCCCGTACGCGGCCTCGCCACACCAGGAGA
CACGCCTCGCCTTCAGAATGTTCCAGGCTCAGTTTCCAGACAAATACAATTACGCTAAGT
CGCACATTCCCGGCCCGGTGACCCCCGAGACTCTGGAACAAGAGAAAGAGAGGAAGCTAC
AACAGAAACGAGCTAAGAGGCAACGAGACAAGGAGAAGCAATTGGAGAAGATTAAAACCA
ACAAGTTCCTTCAGATGACCGATACCGAAAAGGCGAAGTCATCGGAGAAGCGTTGTTTTC
TTTGTGGCTCAAATCTCCCGAAGAAACCGTTCGAGTACGAAGTGTACAGATTCTGCGCAG
TGCAATGTCTCCAGAACCACAGAAACATTCGACCTCTAAACATGAGCGCGTGACTGGAAA
AGTGCC
(2226 bp)

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