SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14242_c0_seq6
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		Interferon_regulatory_factor_2-binding_protein_2-A_[Operophtera_brumata]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003714 F transcription corepressor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
Transcript
Level		FPKM:20.68 TPM:20.80
ORF EntryO_BomoSK19506_complete:A_BomoSK_comp14242_c0_seq6
Sequence
(Nucleotide)
CCTCGACCTCTTAAAGAAGCTAGTGTCTTTTATGTAGTGGCAACAAACAACTGTCGTCCG
CGAAGTCGAATGTGAAGTTTTGTGTTTTTATTTGTGACTACCATGGTGACAGTGTTTTTT
CCCGAAGGCATAATAAATCAGTGACAATTTTCAAGAGAAACGAAGAAAACCGATCTCTCG
CACTCCGCACTACACCCGGCGGCGAGATGTCGGTGATGCAGAAACGGCAACACTGCTACC
TCTGCGACTTGCCCCGCATGCCGTGGGCAATGTTGCATGAGTTTTCAGAAGCAGTGTGTC
GAGGGTGTGTAAATTACGAGGGCGCCGATCGAATCGAAGTAGTTCTAGAAACAGCTAGAC
AACTAAAACGCGCTCATGGTTTCCAAGAAGGTCGTGGTCCGTCGCATGCAAAAGGAGCAC
ATCGTACGCCCTTAGAAGCCCATCAAAATGGAGCAGAAACAACAAGAGGACAACCTGCAC
CTCCAGCTCACCATACACCGACGGTTGGTTTTACGTTACACCATCCACGACCTACGGCTA
GTGCAGGCCTTCTGGCTGAATATGGAAGCCGAAGAGACGAACATGAGGGTAGACGACTAG
CCCATTTACCTACACATCATCTTCCGGCACATGCAGGGGCACGTCTTGCTCCTGGTCTCA
CTTTAAAACGACCAATGGATGATGATGACCATCAGTCGCATCACGAACCAGCTAAAAGAC
TTCTAGAAGAACACTCTCGGCCGCCTCTAACCCGTGGTGATTCACTGCCAGCAGTATCAC
TAGCTGCTCCTTTCGCGCCAGATCGCGTTTTCAAACAAGAGAAACATCCTCTCCGTACTC
CTTCTTTTGATGGAACTACGTTTAAAACGAATGGATATGGGAATCCCGCACCGCTGACCA
ATGGATCGGCAGGCTCACCCCTCGGTCGCACGGCTGGTTCGCCACCGGTGACAGGCGCTC
CTGGCGCTGGACCATCTCCGATGGCCGCACTAATGTCAGTGACTGACACTTTGCCTCCGG
GATCCCCGCGATCAGCCGGAGGATCACCACCACAGCCCCAGACGCAACGATCTGCCAGCC
GGTCTAGCCAACACTCGCCAAATTCTTCAGGGTCGAACGGCGGGCGGCGGTCGTCGGGCT
CTCGACACGTGTCGTCGACGACGTCGGTGTCGTCTACGGAGGCCGGTGAAGGCGCCGAAG
TGCCCGCATCCGCATCCGCACCGTTACTCAAATGCACCTTGTGCCAGGAACGCTTGGAAG
ATACGCATTTCGTGCAGTGCCCCAGCCAACCGCACCATAAGTTCTGTTTCCCCTGCTCCC
GGGACTCGATCAAGAGACAGCAGGGATCCGAGGTGTACTGTCCCAGCGGAGAGAAATGCC
CCCTGGCGAACTCGACGGTCCCGTGGGCATTCATGCAGGGTGAAATTGCTACGATAATGG
GAGACGAACTGAAACCGAAGAAGGAACGCGAGACTTAGAGCGGCACCTGGTCAGGCCGAC
TGTATCTGTTGTCCCTCTCGCTCGCGGGAGGAGAGCCGCGGCACGAGGCCGCCCGGCGGC
TCCGCGGCGGAACACCGACGAACGTCTTGTATATAACATTGTAAATAGTCAACCGTTACT
ATATCGGTTCGCTCGACGAACCTCACGATCGATTCGATTTCACTTCCCGACGATCGGCGA
AATGCATCGTGGACTTCGTTTGGTGATTCTTGTACGCGGCGGGCGTCCGACGACGCTCCC
GTTATGTTTCGAATGAAGTTCACGTTGGTTTTGGTAGTTTTTCTATACGTCATAGGAGTG
GAGCACCCGCGCCATTAACGGGTGGAATTATTGATCTGAATGAAAAAAAAAACTTTTTTT
GGTTTTTCGAGTCGAGGAATTTATCCCGAGCGAAAGTTCTTCAGATGCCATTTTCTAAGT
TACCTTTAGATTCTGAAACATCGCTGACTTGGCATTTATTTATGTGATTCTTGTATAATG
TACGAGTATTATGATATAAAGAACATGACATGATTTTCGTAGTTCAGATGTCTGATTGTA
AAGATGTAGTTCTTGAATTTTAGGAGACCCGAAGCTCCGTGCACAGACTAGTTCGATGTA
AAATTGTATTTGTAACAAGCGCAAAAGAAACTTATTTTTTTCTAGATTGCGATTTTTTTA
GAGTGGTTCGAGTTCCATTACTGTTCTGCTATTGGCCCATCATTCGGCATCACGGAAATT
GTTTTATTCTAAACTATTTAAATGAGATTCGAAATTGATCAAAATTCTAATTGGCTGGCA
CAGAGCGACGTCAAAGAAACGTCACCGACGATTGAGTTGTTTTGTAAAGTTAAGTTAAAA
GAGTTATTTGGGGGTTCAGCGTCGTCCGTGCTCCAAGCTGACGTCTTCTTGTTGATTAAG
TATAGTGCGGAGACGAGGTTGGAGCGCGCCCGCGCGGGTAGGCTGCAGTATTAGCGTGAG
CGCTTTGTATGTGTGTGTGGGGAGGCATACCTAGTCATTTTGTGAAATGTCAAATTGTCA
TTACCGCAAAGAGAAGCGGCCGTTATAGGAACTCTTAAAACTCGCTGCTGTATTTGTATA
AAGTGAATTAATCAATATAATTATTATCGATTTATAAATATGTATGTATTTCGTAATCTT
AAACGATTCGTAGTGCACGTCAATTTCGAAGGCTATCAGATATCGGCCTTTGTAATATTA
TGATTTACGCGATTTCTTTACGGGGTTCACCGTCTAGAATCTTCTTATTGATGTTGTGTA
CCTGCCGTGCTTCATTGAATCTTCGCTGAAAGACTTAAACATTTTTCTAAAATCAAATTA
AATAACAGCTTATTTGTCGACTGCGCTTTGTTTATTGGTTTTCTTAGCTTTATATTTAAG
TCTAGACAGAATGTATGTCTTTAAACATTGATTAGAACATTCAATTTAATTGAGATGTCC
GTTATTTATTTTATATGTTACATAATTATGTACATATATCTGTAAATATAATTTTATCTA
CTTGTAAATAATTTCTAGATGAAGAATGGCGTTGACAGCCATATTGCAATCCACAAGGCG
TTTCGATTCAGTATTAGTAGCGAACATTCGAGTTTACGTACCAAACGTGTGTTTTGATTT
TATTAAAGATACTCAAAAGTTTAGTGCTTTATCGGATAGTACCGTTTGAAAAAAAAACAA
TAGTGTCTATATAATAAATAAAAGATTTTTTTTTGTAAACTGTCGAAATTTTGGTTTTGC
GTAATGCATTTCTCTTTGTAAACCGATCAGGAAAACTTTCGGTTGGTTGTCATATTATCA
TTGTAGAATACCATATGGGATGTGTGTCAACAACTTTAACACAAATAAAACGATATTCAT
TGACTGATCCCCTCTGGTCTGTATTAAATTTAATTTTTTGTGAGCCTGCAATGTATAGCG
TACAAAACTTGAGGGTTAATCATTGCACTAACAAACGTGTACTTAGTTGTCTTGATTTAG
ATAAAATTGGCAATGTAAGAAGAACAGGATGGATTGCGATCTTTGACTTTCATTCGTTAC
GTTGACAATAATGGCATCCCAAAAAAATCGATTATCACACTGGTAATTTTCTTTTTTAAC
ATTTTATGCGGTCGTGAAATTTTATATTAACACAATACTTGAATTAATTAGCAGAACAAA
TATTGTTGTCCGTTTATGTCAAGGTTGACCCGGTATTTTAAAGTGTGTTTTTTTCCAACC
CTTCGCACTCTAGTATTGTCGAGTCTCCTCGTGATTTGAGGTCGTAAAACTAGTGGTTAC
TTAAAGTTGGTTCCCTACAAACCAAAGTAATGTATTCACGGAGATATCTTTCAAGAAGAG
GCATCTAGAGTGCAAAGGGCTTATCACTGCGTATTTTCAGCAGAAATATGAACTTAATAT
TGAAATATCGATGGTTTTTTATCGTAAAGCCTCATGTTGCTACTTAACGTCGTTTTTCTG
ATGGTTTCGAAATTGAAGTCGAACGTAGTGCTAAAACAATTGTAATACTGACGACGCCCA
ATTTTGGACGATCGCCGTTAATTAATTTTTTCTCGCCGATTTTTGGCGCCAAGGGATATG
CATGCACAGACGCCTCTGCGTCGTGTATGTTTTAATTTTTTGTGGTTTTTATATATATTA
AATGTACATATGAAATAGAGTGTAATTTAGTGTGACGTTTTTGAGTCGTAATTTAACGCG
GAACTGTAACATAGCACGAAAACCTTGCCTTTCAAATAAGAATGTGCATGGACCCGCGCC
ATATTGTGACGTCATAGCTGTCAAATCGAAAAAAATAGATGGTCAGAAAAACAATAATTA
GGGAAATAATTCACTAAAAAAAACTATACAAATATTTTTGTTGCTGGCCACACTTTTTTA
TCGAGCTTTGGCAGATCAAGGCTATTGACGCGCACATTCTTATTTGGAAATTATTGTTTA
ATAGAAGGCATTTTTCGGCTACGGGCGAATAGACATGTAAAAAAAAAACAATCAAAAAAG
TTTTTACTTCATGTGTCTATTATCTCGGTTTTTCCATTACGAAATATACATTTTTAATGT
TTTATAATGTACATTTAATATATGGAAAGCTATGGTCCGCCTACCGACAGGCTTTTGTAG
TTGTCGATCTCTATATGTCGACACGGAACGTTTTGTGACTCGTCTCGTTCTTACCGTAAG
CGGAATGTGAGATGCCACGACGTAAGACGTAAAATGTACATGTTGGTGAAATACAATTGA
TGTGATTTTTATAAAAAAAAAA
(4762 bp)

- SilkBase 1999-2023 -