SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14236_c0_seq8
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_eukaryotic_translation_initiation_factor_5B_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003743 F translation initiation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006446 P regulation of translational initiation
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:18.94 TPM:19.05
ORF EntryO_BomoSK19456_complete:A_BomoSK_comp14236_c0_seq8
Sequence
(Nucleotide)
TGACATATTAGTGGAACGGACACGAAGGCGAATAGTCGGAAATTACATTTTTTCAAGAAT
AAATTGTAGTGCTGAGTGCGCTTATTTCAATTCACATGATAGAAATCGCAAAATACGCAA
TAACGGAACATTATAACACTGGGATTGTGACTTAATAAAGATATTGAATATCAATATGGG
TAAAGCAAAAAAGGGCAAGAAGAATCAAACCACTGAAGAGGGCGACAGCGATATTGAAAC
GACAAATATCAGCAATGCGAAGCCGGTTCAGAAAGTAAAAAAAATTGTTGATTCTGATGA
AAGTGAAGAAGAAAAACCTAAGGCAAAAACAAAATCGAAAAAGTCAATTGATGAAGATGT
AAAGGAAGTCACAAAGAATTTAAAAAATGTATCCGTAACAAACAAGTCTCAAAAGAAAAA
AGCTGATGTAACTAGTGAAGATGAGTCAGATAGTGAACTAGAAGTGAAACCTAAAAAGGG
AAAGAAAAAAGATGAAAAGAAAAGTGTCTTTTCTTTATTAGAAATAGAGAATGACGTCTC
CCCACCTGAAGCACCTATGTCGTCTGAAGATGAAAAACCGGTCCAGAAGAAAGCTGCACC
AGAAAAGAAAGAAACCACCGGAAAAAAAGGCAAGAAAGCCAAAAGAAAGAAGGATGATAG
TGATGATGATATTGAAAAAGTCCTTGCTGAATTAGAAATGGAATATGCTGGTGTTAAAAA
GGAACCTACTCCTGCTCCAGAATCTGCCCCAAAACCTCAAGAACCTGTTGAAGAAAAACT
TAAAACAAAAAAGAAAGGTAAAAAGGATGAACCCAAAGAAGAAATTGTAGAGGTAAAGGA
GGCTGATGATAATAAAAACGATAGTGAAAATGAAATTGATGTTAAAGTTAAAACAGCTGC
TCAAAAGAAAAAGGAAAAAAAAGAAAGAGAAAAGTTGAAGAAACAAGAAGCCAAAAAGAA
AGAAAAAGATCATGAAGACCGAAAAGAAGTTGGTGAAGGAAAACAAAAGGCAACTGAAAA
AATAGAACCTAAGCCCATTGAAGAACCTAAAGAAGAACTTATACCTCCTTCAGAAGATAA
AGAGGAAGGTGATACTCCTGCCGCTGAAGGAAAGAAAAAGAAAAAAGGTGAAAAAGAGAA
AGAAGATAAGGGCAAGAAGGGGCCAACAAAAAAAACTATTGCTGCTATGCAAGAAGCATT
GAAGAAAGTTAAAGAAGAAGAGGAACGTTTACAAAAAGAGGAAGAAGAAAGATTAAAGCA
GGAGGAAGAGCGTGAGCAGCAGAGGTTAGAAGCCATTCGATTAGAGAAAGAGAAGAAAGA
AAGAAAAAAGCAAAAGGAGAAGGAGAGAAAAGAAAGACTTAAAGCTGAGGGTAAACTACT
TACTCCTAAACAAAAGGCTGAGAAAGCTAGAGCTCAAGCTTTGTTAGAATCATTAAAAGC
TCGTGGTGTTGAAATCGGATCAACTGAAAAGAAACCACCTAGACCTGGAACAAGGGTTAA
ACCTGGAAAACTTAAAAGTCAAATGTCGCAAGATGCCCCACTGACTCCCATGGAAGAGAA
AAAAGTTGAACTTGAGATTGTTGATGCTAAGCAGGAAGAACTCCAAAAAGTTGATTCAGA
AAAAAAAGAGTCAGAAGTAGATTTAGTGAAAGATTCTTGGGATGCTGAATCTTCTGAAGA
TGAGACAGAGCCCGAAACAAAACAAGAATCTGTGACTCCAGTCAATGCAAAGAAGCCAGG
CACGCCCGAACCTAAATTGAAGGATGATGATGAAGAGGAAAGTTCTAAAGATGAAGATGA
AAGTTCAGACGAAGAGACCAGCTCAGATGAAGATGATGAAGACACAAAAAGGACTGATGC
AGAAAAGAAAAGAGAAATAGTATTAAAGAGATTAGAGAAACGTCGTCAAGATAACGAAGC
AAACAGAGTCAACAACCCATTACGTGCGGCCGTAGTATGTGTCCTCGGTCACGTAGATAC
AGGAAAAACCAAGATTTTGGACAAACTTCGAAGGACTAACGTACAAGACGGCGAGGCTGG
TGGCATCACTCAACAAATCGGTGCAACTAATGTTCCCATTGAGAATATTAAGGAACAAAC
AAAACACGTCAAAGGGGTAAGTGAAATAGCCTTCAAGTTGCCAGGACTACTCATCATCGA
CACACCAGGCCACGAGTCTTTCAGTAACTTAAGAAGCAGAGGATCATCACTCTGTGATAT
TGCTATCCTTGTAGTTGACATAATGCACGGATTGGAACAGCAAACTATTGAGTCTATCAA
TTTACTGAAACAGAAGAAGACACCGTTCCTAGTGGCCCTGAATAAGATAGATCGTTTGTA
CGATTGGCAGAGTGCTCAACGTAAAGATATAAGGGATATATTGAAACTGCAGCAGCCAAA
TACTCAGCTGGAGTTTGAAAAACGCAGCAAAGATGTAATGTTGCAATTCGCTGAACAGGG
CTTAAACGCAGCTCTGTTCTACGATAACCCGGATCCGCGTACGTACGTGTCTCTGGTGCC
GACATCGGCTGTGACCGGCGAAGGTATGGGCAACCTGTTGGCGATGATAATCCAGGCTTG
CGAGGGACCGCTGCACAAGCGACTCATCTTCTCGCAGCAGCTGCTCGCAACTGTACTCGA
GGTGAAAGCGATCCCCGGCCTAGGAACAACCATAGACGCGATCCTTATTAACGGTACTCT
GCACGAGGGCGACACGATGGTGCTGGCCGGCACCGACGGGCCCATCGTCACACAGATCCG
GTCCCTCCTCATGCCGCAACCAATGAAGGAGCTGCGAGTTAAGAACGCATACATCGAGCA
CAAAGAAGTCGTAGGAGCACAGGGTGTTAAGATCGCAGCGAAGGAACTCGAAAAGGCTAT
CGCTGGATTGAACTTGCTTGTCGCTCAGAAACCGGATGAAGTTGATGTTCTGAAGGAGGA
GGTGGCTAAAGAATTGAAATCAGCCCTGTCGTCTATAAAATTATCCGAACGAGGTGTTTA
CGTCCAAGCTTCGACTCTGGGTTCGCTTGAAGCTCTTCTGGAGTTCCTCAAAGCTAGCAA
AATTCCGTACTCAGCCATTAGGATAGGACCGGTAGTAAAACGTGACGTCATGAAGGCTTC
CGCCATGTTGGAACATGACTCTCAATACGCGACTATACTGGCTTTTGACGTCAAGATCGA
ACGCGACGCCCAAGAGCTAGCCGACCAGCTCGGCGTGAAGATATTCGCGGCCGACATCAT
ATATCACTTGTTCGACAAGTTCACGGCGTACCGGGAGGAACTCAAGCAAAAGAAACGAGA
GGAGTTCAAACATATCGCGGTGTTTCCTTGCAAACTCAAGATCCTGCCGCAGTTCGTTTT
CAATTCCCGTGACCCCATCGTTGCCGGCATCATGGTCGAGGCTGGCGTAGTCAAAGAGGG
AACCCCTATTTGTGTTCCTAGTAAAGAGTTCGTGGAGTTGGGCATCGTTACGTCGATAGA
GGTGAACCACAAACAAGTGGAAACCGCCAGGAAGGGTCAGGAGGTCTGCATCAAGATCGA
GCCCATACCCGGGGAGTCGCCCAAGATGTTCGGACGACACTTCGACGAGACCGATATGCT
AGTCAGCAAGATATCGCGTGCCAGTATCGACGCGTGCAAGGATTACTTCCGGGACGACCT
CATCAAGACCGACTGGCAGTTGATGGTTGAACTGAAAAAACTCTTCCAGATCCTCTAAGA
GGTCCCTTCGCGCCGTTGGATCTCATGTAACGCTCTCCGCGCCGCCACGCCACGTGGCCT
CTCCACAAGAAACCTTGTCTATTCCATCTACCAGCAGACCTTAATCCGTTGTAATATAGA
ATCTCAAGTTTTATAAACATCATAATCCCTAATTCAGTTACCGTTTTGTACATTTTAATA
ACGAGAGAATGCTATTGAGTGTCGGCACTCCCGTACCCCGCGAGAGATATCTTCACAACA
ATTCATTTGTATCTCTAATAATTTGTAAATATCAAATACAAACAAGTTTTATCGGTTTAT
GAAAAGTCATCTTTTAAATTTAGTGAAGGTTTTTTTTAAATGTTTAATTCGTGTTTTGTT
CGATCGATTTTGATGGAAAACTCTTTTGAATACGATACAACCACGTCTCCCAGCATCATT
AATATAAATTATTATATCGTTTGTAAATACGACTCGAATGAATTTACAATAAATTTGACT
AATGTAAATATATTAAAAGATTCTCTGTCTCTGTGTGTTTGAATAAAAAAAATGTCATTG
TGCAATAAACGATCTCGCCTGAATTGCGTTGTGACGTAATTTGAAAAGTTTATTTATTAG
GGGTGTATATTGAAGAATATCTAACTTGGATATATCGTCAATCAGTTGACGACTAGTGAT
GTGTTCGGATGAGGTTAGCTTCGTTCGGTGTTTTCGTCTTCGGCGTGTGGAGGTCGTGTA
TTGTACAGGAACGGTGTAATTTAGTTGAGATCTGTGTGCTTAGTGTGAGTTTTTTAACGT
TCTCGATACCGTAAAAGTTAATTGTATGCAGTTGAAACAGCGTCCCTAGCGACAAACGTT
GGCAAACGTTCCAACTCCATACAA
(4584 bp)

- SilkBase 1999-2023 -