SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14228_c0_seq6
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		ATP-binding_cassette_transporter_subfamily_G_member_Bm3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0033344 P cholesterol efflux
GO:0034041 F ABC-type sterol transporter activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
Transcript
Level		FPKM:3.61 TPM:3.63
ORF EntryO_BomoSK19330_3prime_partial:A_BomoSK_comp14228_c0_seq6
Sequence
(Nucleotide)
GTGATCAAAGGCGCGCGCACACAGCCGCGCGACGCATTCGCCAACACTGCGTACGCGCTT
ACAAACGATATTAGTTAAAATGATGCTCGCCGGAGCGCAAATCGTTGAAGACAGTGTGTC
GTACAGGCCAGAAAATGCATCGGTTTCGATAGGGGCCAACCCCGAGCCGCAGCTGACGAC
GCAAGGGTTCTCCAAGATGCCCACAAGGGATCCCGTGGACATACAGTTCACTAACATCAC
ATGCACTGTACATCTGGGATTCAACAAAGGCTCGAAGCAAATTCTGCATGGTGTGAACGG
ACGACTCCGGCCTAAGCAACTGGTTGCGATCATGGGTCCCTCCGGTGCTGGTAAATCGAC
ACTTCTGGATGTTCTATCCGGATATCGTATCACGGGCGTCGGCGGTGTTGTCCACGTGAA
CGGAAGAGGCAGGAACATGAAAAGATTCAAGAAGATGTCGTGTTACATACAGCAAGACGA
CCGCCTGCAGGGACTACTGACTGTCTCAGAGAACATGGTATTGGCTTCCGATCTTAAGCT
CTCCATCAAAATGGACAAATACGAAAAAGGAGAAGTGATCGAAGACATATTAACTGCACT
GGGTCTGTACGAGCATATGAGCACGCGTGCGTCCCGCCTCTCGGGTGGACAGAAGAAGAG
GCTCTCCATCGCTCTGGAGCTGATCAACAATCCCCTCGTTATGTTCCTCGACGAACCAAC
AACTGGTCTGGACAGCTCCTCGTGTAGTCAAGTAGTCAAGCTCTGCAGGGATCTGGCGCA
GCAGGGTCGTACCATAGTCTGTACGGTACATCAACCCTCAGCGTCACTGTTTGCCCTATT
CGATCAAGTATACGTTTTAGCTGCAGGAAATTGCCTCTACCAGGGCACCACAAAGAACTT
AGTACCATACTTGGAGGGGGCCGGAGTACCGTGCCCTATATACCACAATCCAGCTGATTA
CATTATCGAATTGGCTTGCGGAGAATACGGTGAAGACAAGATCCAAATCCTAACGACAAA
AGCTGAAAACGGACGAGCACTTTCCTGGTTCGACGATCCTGACTCCATGCCCACTATGGA
AGTCTTAAGAAAGCAGTGTCCTCTTAGCGTCTTAAAGGAGCAAGACCCTAGTACTGGCAA
CGAAGAAACTCCTAGATCCAATCAAAGAAAAGTACTTATTAAAAGAGGATTCTTAAAAGC
AAAACGCGACTCCACAATGACCCATCTCCGGCTAATAGTGAACGTGTTAGTGGGAGTTAT
GTTGGGGAGTTTATTTATCAAGGCCGGTAACGAAGGCTCCAGAGTCTTGGAGAACTACAA
TCTGCTGTTTGCGATACTAATGCACCACATGATGTCGCCAATGATGCTTACCATACTCAC
TTTTCCGTCGGAAATGTCCATATTATCAAAGGAGCACTTCAATAGATGGTACTCGTTGGG
TTCCTATTACATCTCTATTACAATTGTCGATTTACCTATTACGATAGTATCTTGTGCGGT
GTTCAGTGCGATAGTGTACACTATGTCTGGTCAGCCGATGGCGATCTCTCGGTTCGGGAT
GTTCTTCGCGATCTCCCTATACACGGTACTAGTGGCGCAGAGTTTCGGCCTCATGATCGG
AGCCGTCTTCAACGTTGTTAACGGTACTTTCCTTGGCCCTACTTTGTCGGTACCGATGAT
GATGTTCGCGGGTTTCGGAGTGACTCTACGCGACCTCCCGCCGTACTTGTACTGGGGGTC
ATACGTCTCGTACTTGCGGTACGGATTGGAAGGATTCGTGGGCGCCATATACGGGTTGGA
AAGACCGAAACTGGACTGCAATGAAGCACCTATATGCCTTTATAAATACCCAAGACAGTT
CCTCTCTGAAGTAGCTATGTCTCCGGACAGATTCTGGTGGGACGTTCTAGCGCTCACGAT
CTTCGTCTTCGTGTTAAGGATTGCAGCTTTCTTCCTCCTAAAATGGAAGTTAAACGCTGT
CCGATAAAGACATCTAATTTGCTCAAGCCATTTATATATACTTAGAATTATAGTAGGTAG
ATTAATAATGTGTTTTTTTTTTTTGGCGAAAATCGTATTTTAAACGGGAATTTAAGTTTA
CTACGGTTGGTGACAAAAACAAAATTAATGTTAAATGTAAAAAAAATTAATGTTAAATTC
ATAAAGAAAATTTTAAGTAAGTAGGTATTAAATTAATTATTGCAACGGTTTCTAGGTTTT
CTTACTTGTACGAACTTGTACAAAGTAAATTATATTTTAGTGATTTCTGTTTTTCTAACC
GTATTTTGAGGGTAGGTATTTTAATTTTGTTGACCTGATTTTTTATCTGGTCTGTGGTTG
AACTAGATAAAATTAAATTAAAATGAGTGCCATTTTACTGAGTCATTTTTATTATATGTA
TAAAATATTAAATACAAGGTGTTATTATATCAAATATAAGTTATCATTTAATAGTAATCG
GATTGATGGTTGATTATAGCTATATGAAAGAAATATTAACAAGGAAACGATAAGAAAACG
CAGCGAAAAGAATATTTGAGTCGTCTATTATCAAA
(2555 bp)

- SilkBase 1999-2023 -