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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14222_c0_seq7
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
Transcript
Level		FPKM:2.20 TPM:2.21
ORF EntryO_BomoSK19296_complete:A_BomoSK_comp14222_c0_seq7
Sequence
(Nucleotide)
AGGTGGGTGGCGGCATTTACGTTATAGATCTCTATTGGCTCCGGTAACCACTTAACACCA
TACACACACTTAAGCAATAAAAAATATATTCTCGTTTCGATTTCGGGAACGGTGTAGTTA
CACCCTGTATAATGGTATGGAGGTTGTGTCGTGTTGTACCGTGGCACGTGTTAGTGCGTC
AGTTCAGCGACGCCGCCGGCCGCACAGTGCAGCGCGCCGCAGCCGACGGAACAGCGACGT
CTCGCGCTATCAGATACGCTCCACGTAGTTGCCTGGGAAGGTACCGAAGCGCCCAGTTCT
CTGGCTCGAGCCGACGTACCAGCCATCGTCGCATTTCTCCAGTACGTACACCGTATCACC
TTCGTTCAGTTCGAGCTCGTCAGGATTTTGAGGCCGGTATTTGTACATCGCACGATATGG
TATGGCTTCGGCATTAGTGTCGACGTACAGGGGTTCGGTGTTATTAAGATCTACCCCCGA
GCCTGTTGGAGGACCGTAGCCACGTTCGGAAGGCGTCAGTGTCGCTTGGGCTGGTTTCGC
CACATAACCAGGAAGTGGCTGAGTGGAAGGTGGTGCATTGGAGAGCGCTGGATTGTTCTG
CTGTGGCGTGTAGCTATGAGAACCCATACTTCTTTTATCGGAACCGTTGAGAAGACCGTG
AGCGGCCGGTGACGCCGCTGGCTTATCGGTGTTTAAGATTGGCCTCGGATCAGGTTTGCT
CTGGCTAGGTTCCTGTAGAATTGTAACGTAGCTGTCCGGGAATATTCCCGTTTTTAAGCC
GTTGCGGCCTTCCCACCAGTTCTGGTCAATACGTCTGGTCAAAGTCACAACTTCTCCTTT
CTTCAATGGCAGTTCGAGGTTGGTCTGTGCTATGAAATCAAACTTCGCCCTGGCACGGCC
TTCGACGATTGACGGCTTCTTAATAACTTGGATTGTATCACCCTTCTGTATCTCTACATA
ATTATACGGGAACAGACCAATTCTTCCATGAATTTCACCTTCGTACCAATTCGCGTCAAT
CTGCCTCCGCACAAATATTATATCTCCTTTTCTAAAACTGAGTTCTCGAGAAGTCTGACC
GTTGAAAGTGTATAGGGCTTTTGCAAGAACTTTGTCGGCATCGTCGTATCTGTTCAGAGG
GACTACGGTCTTCTGTGAAGGCGTGAAGTTGTCTTGGTGACGCCTGTTTTGCATATCTTG
CAGCTCCTTAATTGATGCATCAAATGCATCTATATCAGACGGTTGGATTTCTCTTTCCTG
TAAAATTTTAATAGCATTTTCAATCTGAAGATTAATCGGATTTTGTTTTTAAAAATAGAC
TTTGCTTTGTATTCTATGCGTTATTATTATCGGATGTCAGATACACGACAATTGGGCTTT
AGTTACAACTACCTATAGGGTGAGAAAAAATTTACTTAATACTATAATTGAAGAACCTAT
TTCAAAAATACATACAGTAAAAACTAATATTTCACGACTTCAACAACAATAGTTTTATTT
TATATTTTAATATTTAAAAGTCACATACCAATCTGTCCAGCATTTTAATAATTTAAATTT
TGCTTAATCTTGAAAGCAACAATAACGCGGTTTCCGCGTCCAACTCTCGCGCACGCTTAC
TTACACCGTAAATCGACAACTACACGTCGACTCCGTGCATATTATAATATGTACCGACCA
ATATTCATTCATATTTCATTCATTTAAAACATCTTTAAAACCTTTAAAATAAGGTTGAAA
CTCTATCAAAACCGTATTAACGATAAAGCACGCTCTCATTGATATGGTTATTTGGCCAAC
GGATTTCTGTGAGTATCCACGAGGAGCAAGGTCGTTTATACCGGATTTTTATGAGGCAAC
AAACACCGGTCACGTTAATGGAATGCTTAAATTATCGTAACTTAGATAACCTAGTGCGCT
GCTCATTCATTGTGGCCAAAACCAGCTATCTGTTAATATTAGCAGTTGTAATTGTTCCTA
GACGGGAGATTTCGATACCAGAGATTCGTTTCAGTACATGTATTATATAACTGAATTTGG
TTGAATACTTAGCTTGTGAATGATTCTTAACAATGCACGTTATGCTCTCGATTTCTAACG
TGTGTCATGGTAGCATGAACATTTCAGTCTGCCTTTCCATGTACGGTAAAGGTTCTTTAT
ATTTAAATAATAAAAATATTGCCATTAAAAACCGGCTTCGCATGAATTAAAAGTGAAATT
GCAATGACGAAATCACGGCGAACAAGTAAGAGTGATAGCAAAAAGTGGAACGCCTTTTGA
AGTAGTACCGATAAATTTCACTCAAAGGGCTTATAGCACATTGAATTAAGCGGCTTTTCC
CATACGAGTTGTTGTAATAGTGAAATCGGTAAGTTCCTGTCAGTACAAACAGCTTGCTAC
GTATGTAGGTACATACATATGTCTTAAAGCGCATATCCGGAGACGAGAATAGCATGTGCC
TATGTGCTAATTTAGGAATGGCACGGGCATGAGATTTATTTCTACAGCAGTTTGGCTGCG
CTTTTGGAGTTGCTGATGTCTATGAGCGACAG
(2552 bp)

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