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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14222_c0_seq4
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
Transcript
Level		FPKM:12.60 TPM:12.68
ORF EntryO_BomoSK19292_complete:A_BomoSK_comp14222_c0_seq4
Sequence
(Nucleotide)
AGGTGGGTGGCGGCATTTACGTTATAGATCTCTATTGGCTCCGGTAACCACTTAACACCA
TACACACACTTAAGCAATAAAAAATATATTCTCGTTTCGATTTCGGGAACGGTGTAGTTA
CACCCTGTATAATGGTATGGAGGTTGTGTCGTGTTGTACCGTGGCACGTGTTAGTGCGTC
AGTTCAGCGACGCCGCCGGCCGCACAGTGCAGCGCGCCGCAGCCGACGGAACAGCGACGT
CTCGCGCTATCAGATACGCTCCACGTAGTTGCCTGGGAAGGTACCGAAGCGCCCAGTTCT
CTGGCTCGAGCCGACGTACCAGCCATCGTCGCATTTCTCCAGTACGTACACCGTATCACC
TTCGTTCAGTTCGAGCTCGTCAGGATTTTGAGGCCGGTATTTGTACATCGCACGATATGG
TATGGCTTCGGCATTAGTGTCGACGTACAGGGGTTCGGTGTTATTAAGATCTACCCCCGA
GCCTGTTGGAGGACCGTAGCCACGTTCGGAAGGCGTCAGTGTCGCTTGGGCTGGTTTCGC
CACATAACCAGGAAGTGGCTGAGTGGAAGGTGGTGCATTGGAGAGCGCTGGATTGTTCTG
CTGTGGCGTGTAGCTATGAGAACCCATACTTCTTTTATCGGAACCGTTGAGAAGACCGTG
AGCGGCCGGTGACGCCGCTGGCTTATCGGTGTTTAAGATTGGCCTCGGATCAGGTTTGCT
CTGGCTAGGTTCCTGTAGAATTGTAACGTAGCTGTCCGGGAATATTCCCGTTTTTAAGCC
GTTGCGGCCTTCCCACCAGTTCTGGTCAATACGTCTGGTCAAAGTCACAACTTCTCCTTT
CTTCAATGGCAGTTCGAGGTTGGTCTGTGCTATGAAATCAAACTTCGCCCTGGCACGGCC
TTCGACGATTGACGGCTTCTTAATAACTTGGATTGTATCACCCTTCTGTATCTCTACATA
ATTATACGGGAACAGACCAATTCTTCCATGAATTTCACCTTCGTACCAATTCGCGTCAAT
CTGCCTCCGCACAAATATTATATCTCCTTTTCTAAAACTGAGTTCTCGAGAAGTCTGACC
GTTGAAAGTGTATAGGGCTTTTGCAAGAACTTTGTCGGCATCGTCGTATCTGTTCAGAGG
GACTACGGTCTTCTGTGAAGGCGTGAAGTTGTCTTGGTGACGCCTGTTTTGCATATCTTG
CAGCTCCTGCAGATATTTATTCCGTTTCTGCTCTCGATACAGCCTCTTCATGTGTTCTGC
CTGCTGCCTCGCAAGCTCTCTCTCGGGTACGAGAGGTAAGGGGTCGTGTCGCACTGGACA
CCGATAGTGGATGTTCACGTCGCTTTCCACATAACGCCGGGGAGACTCTTGACGTGGCGG
GGCAGGAGATCGGAATCCGCGTAGGGGTGGCTCCCCGCCGGCCTGCAGGTCACGATACGC
GGCCCTCCTCTCCGCTGGAGAGAGCGGAGCGTCCGTTTCCTCGCGACGGCGGAATATAAG
AGTAGAATCAGATTCATAGCCCGACTCCTTCAGAGCTTTTGCCATGTTGGATTTTGACAG
AATTGCGGCAGTAATATCCTTCTTCTCTTTTGGCGAAGGTTGGGGCAACGAGGTAGTGCT
GGATATATTTTGCCCGTCAAAAATGTCCATAACCTCGTCCCACCACTGCTTTGCTTCTTT
ATCAACGACTGAAGATTTCCCGGGCACATAGTTCTCAATCCTTCCCGGCTGGTTCTTGTA
AACTTCTTGGCTTGCCCTTGCCGATGCTAATGTACTGTATTTATTATTGGATAGATAAGA
GGAACTGACGTCACTGATCCGGCGATCTTCCTGCACGGATGCCGTTCGTCTCCTCGGGCC
CGTCGTGACGTCGCTGTCATAGGCATCACTAAACGCACTGAGCCTGCTCAATCCTCCTTC
AGGTTCGCTCAGGTAGCCAGAACGTGGGTCGAAATATGCGTATTGAGATTTACTGCTTGG
CACCCTTTCTGCTGCCTCTCGTCGACTTTTGTATCGTATTGTCACGTAATCGTCATCGTA
TTTGTTTTTATGAATCGTGTCGTACATCTTTTTATACCAACGCGATGGATCTTTGACTTC
AGATCTAAGTGTAATCGGCATGCCGTCTTTTGTTATAGGTCCAACACCGTCGACTTTCCG
TTGAGTATCAGACATTTTACGAACGCCGACACGTTCGTAATCTCTTCTTTCTGCTTCGCT
CTCGCTCGCGTACTCTCTTCTTAAGGCATGGACTGGGTCACCGCTTGGTGGCGAAGGTCT
ATCACGAGGTAATCGGGCACTGTCTCTTTCTGATTGAAGTGTAGCAGGACCCCGTGGCAA
CTGTCCTTCTCGCGCTTTTTGCAAGAGCGTGACAGTGGGGTTCTGCACTCGTGGTAGCCG
GCTAGTAGACGATGAGCCGCTCAGCGTGTTCAGTCCGGTGGCGGGGGCACTCTGCGAGGT
ACGCAGTCGACCCTCGCTCTCGGAGCCACTGGTGCAACCGTTTTGTTCCGTGTTTGTGAA
TTTCCGGCGACTCGGTGGTGTTTCCTCAAAATGTACTGGTCTGAATGTCTTCCGTGTGGG
TTGCGGAGATGGTTCCGCGCTACCCGGCGTCCAAACCGGCGGGGGCGGCGGAGGCGGCGG
TCCGCCGGGACTGCGCGGGGTGCTCGGAGCCGGCGGGGGCGTTGGCGCTCCCGGCCTCCA
CACGGCAGAGCTATTTGTTTCTTCGCCCTTGTCCTTAATTGTAAAATGAATGAAGTCTTG
CAAATGACTAGGCAAGTTTTGGACATCCTTTTCTTCACCACTTTCGATAACCTTAATTTT
GTGTTCAATTATTTTAGGTTCTTTGAATACTTTCCTACTAACTTCACGCTCATCTTCCGT
ATCGGGGTCCCTAATTCCTAATTTCTCCCATCTTTCCCTAGCCTTTGATATAAATTCTTT
TTCAATTTTATTGTTGACCTTTGAATCAAAATTTTCAAGTGTGGGCATACTTTTCGATAT
CGACCTTATCGAAGTGGGTGTGTTAGTAATTTTTATAACCTTATGGTGCTTTCTTTCCAT
TCTTTCTGCCATTTGTGTCATATATTCAGTATACATTTTTTCACGTTGCAATTCTTCTTG
ACTACTGCTAAATAACGACGATAATTTATCTTTATCATTTCTGTTTTTTATTAGATCTTG
TGACGACATGACAACATCTCTTTTACGAGAAATCAATACCTTGTCACCGTTCTTTATATC
ATTTTCAATAGTTTCCTTTTCTGAGATCAGTGGGGCTCTAGGGCCTTTCCTTAGATTCTG
TGTTTTCATTCTGGACTGATTCTCCAATCGTTGAATTTCTGCTTCTACCTCTTTCTCTTT
CTGTCGTATGTATTCCATTTGTTGTTCGCATAGATCCTTTGGTAACGAAGGTCTTCTAGG
TTTATCATAATCAATTGTTTTATCTCTGACATTTGTATAAAATCTGTGCATATTCTGAAT
GGAAGATATGTCGCTCTCAATTTCTTTATTCAAATTGCCAGTTGAAAAATGAAACTTCTT
TGTCTCAGTTTTAATAGAACGCAGAGAGTTTTCAGCAAAATCAGAATTATCATCACTTTC
ATAGAATCCTAATGAAATTTTTCTCGGTCGAGGAGGCGGAATTGGCTTGAATGTACCAGA
TAGTTCACGCATAAGATGACTTGCCTTGAAATCATTTTTTTCTTTCGACAATTGTCGATA
TGATAGATTATTTTGTGTCTGTGTAAAACTATTGTCACAACGTGTTTTTAATGAATTTAC
ATTTGAGGTGATGGTCGGGTCGCATATTAAAGCTAATAAACGGCTTCCGGTTTGTGATTT
TAAAGGCGTGAGAGTATTAGTATTAAGATTATGTTCTGTATTTTGAAAAACATCCCGAGA
ATCAATTTTGAATTCCTCATTGGTGATTTTTTTACTATATTGTTCAGTGCGCCTTCCGAC
GTTATCACGCGTTGTTGCAGTCGAATTAGTTTTTTCCATTAGCATCTTTTGCGACGGGGA
CATAGACAATAGTTTTGGTTCAGATTTTGGTGCGACATCAACATTATGCTCATTTTCTAG
TGGCTTTTTTAACGAAGAAACGCGAGGCTTTATTGGAGGAGGTGCATTAATTGTAGTTTG
CTTCGTCGATGAATGAGAATCTTTCGAATTATATGTTTTTTTAGTAGGACTCATTTTGTT
GATACTGACATTTTGTAAACGTTCCGAAACGGAGGCTAATTCCTCTAAAATTTTGTCTCC
ATATGGCAAAGACGCAATTTTCTTTACACTAATTTCTCTTAGCGTATTCGGATGCTGTAT
GCTACAACCTTCATTAGTCAAATAAGATTTAGATACTCCTGTAACATGCTCTATAACATC
ATTAACATGGCTGGATACATTAGAATGTGTCTTATCTGTGACCTTAACACATATGTTATC
GTTTGCAGTACTCTCAGATGCTTCGTCGTTATGTAAATCAGATATGTCATTCAAAGATGT
AGACGTAGGGTTATATTTAGCTGTGCTTTGTGAAGAACAAACGCTACTCGAAGAATCTTG
TCTGGTAAAATTTTCTTTGCAATTTTGAAAATCATTTGAACTTTCTGAATCAGACGTAAC
TTCTTTTATCAAGTTATTGAAAGCATCATTTAATTCACATTTAATCACTTTTATTTCCAA
ATCAAATTTGGTGTCACGCTTAGTAACATTACTCTCATTTAAATTTTTAGTAATTTCTGA
ACCACTTGATTTACAAATACTCTCAAGTTTTTCAATTTCATCGCCTAATTCTTTAACATA
GAGATTTGTGTTAATGTTGTCCGTTGATAAAACAACAATTTCGTGTGATTCTGGCATTTC
TTTGGTTGAAGTAGTAGGGAGGTCTTCCGTGGTATTTTTCTCTAATTCAATTTTAATAAA
TCGTTCATTATTGATACGTTTATTTTCCATTACATCCTGATTTTCTAATTGAGAAGTATT
ATGGTCGTCGGATATATTTTGCCCAGAAGATAAAAAGTTTTTCTTCAGCAAATGTTCAGT
ATCAATTACTTCGATTGTTGGTGTAATCATACGCACAGAAACATCTGTATCGATACTATC
ATCTGTCTCTTCCTCTATTTCATGTATAGAGCTGGTACTGCTTGACGAATCAGTTAAATA
TACTACTTCGGCACCGGATAATTTTTCAACAGTTTTCATAGTCCAGTCGCCTCGAGCTTC
ACTCACTTCAGGTTCCTTTATTTTGGCATCAACTAAAACACATTCTTGAGACACAAGACG
GCCTAATGATTTGTTGCGTAAGGCTACTGGTGGTTTTGCAGCAAATTTCTCTCTTATAGC
ATTTGTATCTTCAAAAACGTCATCTTCTAAATCTTCAAAGTCACTTCTTTTTTCACTCAA
ATATGAATGGCGGCGAGAAGTCATTGATGATTCACTACTACCTTCTTCATCAATAACATC
TAGCATTCTTGGAGGACAAAGCTTTTGTGGAAAACTATCATCGGCCGATGCTTTTTTACG
CAATCTGTGTTTTACTTCACGATTTATAATCTGTTCGATTTCAGTTTTAATTTCTATAGA
ATTAAGATTATCTGGACTTGTCGAAAGATTAAGTGTTTTCAAATAATTTCGCAACGATGC
TTCTTGATCAGGAGTTAATGATTTTATATTTTCGCACTGAGCCACATTAAGAGGTAGCGT
AGTTATTGAAATACTTTCAGTCGCAACTTCTCCGGTAAATGGGTTACGTGTTTTCAATTC
ATCAATTTTTTCCCAACCTACATCTGAGTCAACGTCTGTAACAATCACATTACTACAATC
GATTATAGGTATATTACATGATTCAGAAACTAATAGTGTGTCATCGGTTATTTCGACAAT
TTTAGGATCATCATCATTGTCTAGGCTTTTACTTTTTACGGAATTCGATATTTTTGGTGT
AGGTTTCTTTTGTTCCGGAGTTTCTACAATGTAAGTTTGAATTTCGTGAATATTGTCATT
TAAGTCTGATATGTTTTCATTCACTGTTTCAATTAAATCGCATTGTTCGCCTTCACTCAC
TTCTTGAGTGATGACCTCTATCGCTTGAACAGCAGCACTGCTTGGACTTAACAAATTTGT
GTTAATGCAGCTTTTGCTGCACGAAGAAACATTATCAATTTCACACAAAGTTGTACTAGT
TTCAGAGTTTTGATTTTCACTCAGGGAACTCTCAATTGCTGAAGTCTCACAAGCATTTTT
CTCACCGTTACTATTCTGTTGATTGTGTTTGTTTTTACGTTTATTTTTATTTTTACGTCG
CTTCGGTTTTTCGGGCATGTTTAAGATCCTTACACTGTTATCACTAACACAACACGATCA
TATCACAAAACAGTCGTCGTCCGTCCTGTCACGGCTTCGCGTCTTCGCGCTTACGATACC
GGTATCCGTAGCGTAGGAGTTAGTTACGTTCTCGACGAAGTAAGCCCTGCGCGTTGTCGG
AATCGCTAGTTTTAGGCCGATAATTTATATTGTTAGTACAAGGGCTCGCGTAACAGGGTC
GACTGACTCGGATCAGAGGAGCTAGCGCCGGTAATCGAAAAGAAACGACGAACGTTCGCC
GGCCGCGGCAGTCGTGCACTCGCGCGGCGATTTACTGATAATTATAAATGGGTTGAAGTA
CGCGAGCGCGCAGTGTCGACTTTATTTTTACGCGGAGACGTGTATGCGAGTGGAGCGCGC
GCGGTGCCGCCGGTATATCGCTGCGTAGGGAGCCCGCACGTCGCTACCATCGCCCGGTCG
ATTCTGT
(6787 bp)

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