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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14222_c0_seq3
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
Transcript
Level		FPKM:7.26 TPM:7.30
ORF EntryO_BomoSK19288_complete:A_BomoSK_comp14222_c0_seq3
Sequence
(Nucleotide)
AGGTGGGTGGCGGCATTTACGTTATAGATCTCTATTGGCTCCGGTAACCACTTAACACCA
TACACACACTTAAGCAATAAAAAATATATTCTCGTTTCGATTTCGGGAACGGTGTAGTTA
CACCCTGTATAATGGTATGGAGGTTGTGTCGTGTTGTACCGTGGCACGTGTTAGTGCGTC
AGTTCAGCGACGCCGCCGGCCGCACAGTGCAGCGCGCCGCAGCCGACGGAACAGCGACGT
CTCGCGCTATCAGATACGCTCCACGTAGTTGCCTGGGAAGGTACCGAAGCGCCCAGTTCT
CTGGCTCGAGCCGACGTACCAGCCATCGTCGCATTTCTCCAGTACGTACACCGTATCACC
TTCGTTCAGTTCGAGCTCGTCAGGATTTTGAGGCCGGTATTTGTACATCGCACGATATGG
TATGGCTTCGGCATTAGTGTCGACGTACAGGGGTTCGGTGTTATTAAGATCTACCCCCGA
GCCTGTTGGAGGACCGTAGCCACGTTCGGAAGGCGTCAGTGTCGCTTGGGCTGGTTTCGC
CACATAACCAGGAAGTGGCTGAGTGGAAGGTGGTGCATTGGAGAGCGCTGGATTGTTCTG
CTGTGGCGTGTAGCTATGAGAACCCATACTTCTTTTATCGGAACCGTTGAGAAGACCGTG
AGCGGCCGGTGACGCCGCTGGCTTATCGGTGTTTAAGATTGGCCTCGGATCAGGTTTGCT
CTGGCTAGGTTCCTGTAGAATTGTAACGTAGCTGTCCGGGAATATTCCCGTTTTTAAGCC
GTTGCGGCCTTCCCACCAGTTCTGGTCAATACGTCTGGTCAAAGTCACAACTTCTCCTTT
CTTCAATGGCAGTTCGAGGTTGGTCTGTGCTATGAAATCAAACTTCGCCCTGGCACGGCC
TTCGACGATTGACGGCTTCTTAATAACTTGGATTGTATCACCCTTCTGTATCTCTACATA
ATTATACGGGAACAGACCAATTCTTCCATGAATTTCACCTTCGTACCAATTCGCGTCAAT
CTGCCTCCGCACAAATATTATATCTCCTTTTCTAAAACTGAGTTCTCGAGAAGTCTGACC
GTTGAAAGTGTATAGGGCTTTTGCAAGAACTTTGTCGGCATCGTCGTATCTGTTCAGAGG
GACTACGGTCTTCTGTGAAGGCGTGAAGTTGTCTTGGTGACGCCTGTTTTGCATATCTTG
CAGCTCCTGCAGATATTTATTCCGTTTCTGCTCTCGATACAGCCTCTTCATGTGTTCTGC
CTGCTGCCTCGCAAGCTCTCTCTCGGGTACGAGAGGTAAGGGGTCGTGTCGCACTGGACA
CCGATAGTGGATGTTCACGTCGCTTTCCACATAACGCCGGGGAGACTCTGCATCTGAATA
GCTCCCATGTTGTGTTCTCCGCGGTGGCTCGGGCGCTGAGTCTGTTTCTTGACGTGGCGG
GGCAGGAGATCGGAATCCGCGTAGGGGTGGCTCCCCGCCGGCCTGCAGGTCACGATACGC
GGCCCTCCTCTCCGCTGGAGAGAGCGGAGCGTCCGTTTCCTCGCGACGGCGGAATATAAG
AGTAGAATCAGATTCATAGCCCGACTCCTTCAGAGCTTTTGCCATGTTGGATTTTGACAG
AATTGCGGCAGTAATATCCTTCTTCTCTTTTGGCGAAGGTTGGGGCAACGAGGTAGTGCT
GGATATATTTTGCTGCTTTGCTTCTTTATCAACGACTGAAGATTTCCCGGGCACATAGTT
CTCAATCCTTCCCGGCTGGTTCTTGTAAACTTCTTGGCTTGCCCTTGCCGATGCTAATGT
ACTGTATTTATTATTGGATAGATAAGAGGAACTGACGTCACTGATCCGGCGATCTTCCTG
CACGGATGCCGTTCGTCTCCTCGGGCCCGTCGTGACGTCGCTGTCATAGGCATCACTAAA
CGCACTGAGCCTGCTCAATCCTCCTTCAGGTTCGCTCAGGTAGCCAGAACGTGGGTCGAA
ATATGCGTATTGAGATTTACTGCTTGGCACCCTTTCTGCTGCCTCTCGTCGACTTTTGTA
TCGTATTGTCACGTAATCGTCATCGTATTTGTTTTTATGAATCGTGTCGTACATCTTTTT
ATACCAACGCGATGGATCTTTGACTTCAGATCTAAGTGTAATCGGCATGCCGTCTTTTGT
TATAGGTCCAACACCGTCGACTTTCCGTTGAGTATCAGACATTTTACGAACGCCGACACG
TTCGTAATCTCTTCTTTCTGCTTCGCTCTCGCTCGCGTACTCTCTTCTTAAGGCATGGAC
TGGGTCACCGCTTGGTGGCGAAGGTCTATCACGAGGTAATCGGGCACTGTCTCTTTCTGA
TTGAAGTGTAGCAGGACCCCGTGGCAACTGTCCTTCTCGCGCTTTTTGCAAGAGCGTGAC
AGTGGGGTTCTGCACTCGTGGTAGCCGGCTAGTAGACGATGAGCCGCTCAGCGTGTTCAG
TCCGGTGGCGGGGGCACTCTGCGAGGTACGCAGTCGACCCTCGCTCTCGGAGCCACTGGT
GCAACCGTTTTGTTCCGTGTTTGTGAATTTCCGGCGACTCGGTGGTGTTTCCTCAAAATG
TACTGGTCTGAATGTCTTCCGTGTGGGTTGCGGAGATGGTTCCGCGCTACCCGGCGTCCA
AACCGGCGGGGGCGGCGGAGGCGGCGGTCCGCCGGGACTGCGCGGGGTGCTCGGAGCCGG
CGGGGGCGTTGGCGCTCCCGGCCTCCACACGGCAGAGCTATTTGTTTCTTCGCCCTTGTC
CTTAATTGTAAAATGAATGAAGTCTTGCAAATGACTAGGCAAGTTTTGGACATCCTTTTC
TTCACCACTTTCGATAACCTTAATTTTGTGTTCAATTATTTTAGGTTCTTTGAATACTTT
CCTACTAACTTCACGCTCATCTTCCGTATCGGGGTCCCTAATTCCTAATTTCTCCCATCT
TTCCCTAGCCTTTGATATAAATTCTTTTTCAATTTTATTGTTGACCTTTGAATCAAAATT
TTCAAGTGTGGGCATACTTTTCGATATCGACCTTATCGAAGTGGGTGTGTTAGTAATTTT
TATAACCTTATGGTGCTTTCTTTCCATTCTTTCTGCCATTTGTGTCATATATTCAGTATA
CATTTTTTCACGTTGCAATTCTTCTTGACTACTGCTAAATAACGACGATAATTTATCTTT
ATCATTTCTGTTTTTTATTAGATCTTGTGACGACATGACAACATCTCTTTTACGAGAAAT
CAATACCTTGTCACCGTTCTTTATATCATTTTCAATAGTTTCCTTTTCTGAGATCAGTGG
GGCTCTAGGGCCTTTCCTTAGATTCTGTGTTTTCATTCTGGACTGATTCTCCAATCGTTG
AATTTCTGCTTCTACCTCTTTCTCTTTCTGTCGTATGTATTCCATTTGTTGTTCGCATAG
ATCCTTTGGTAACGAAGGTCTTCTAGGTTTATCATAATCAATTGTTTTATCTCTGACATT
TGTATAAAATCTGTGCATATTCTGAATGGAAGATATGTCGCTCTCAATTTCTTTATTCAA
ATTGCCAGTTGAAAAATGAAACTTCTTTGTCTCAGTTTTAATAGAACGCAGAGAGTTTTC
AGCAAAATCAGAATTATCATCACTTTCATAGAATCCTAATGAAATTTTTCTCGGTCGAGG
AGGCGGAATTGGCTTGAATGTACCAGATAGTTCACGCATAAGATGACTTGCCTTGAAATC
ATTTTTTTCTTTCGACAATTGTCGATATGATAGATTATTTTGTGTCTGTGTAAAACTATT
GTCACAACGTGTTTTTAATGAATTTACATTTGAGGTGATGGTCGGGTCGCATATTAAAGC
TAATAAACGGCTTCCGGTTTGTGATTTTAAAGGCGTGAGAGTATTAGTATTAAGATTATG
TTCTGTATTTTGAAAAACATCCCGAGAATCAATTTTGAATTCCTCATTGGTGATTTTTTT
ACTATATTGTTCAGTGCGCCTTCCGACGTTATCACGCGTTGTTGCAGTCGAATTAGTTTT
TTCCATTAGCATCTTTTGCGACGGGGACATAGACAATAGTTTTGGTTCAGATTTTGGTGC
GACATCAACATTATGCTCATTTTCTAGTGGCTTTTTTAACGAAGAAACGCGAGGCTTTAT
TGGAGGAGGTGCATTAATTGTAGTTTGCTTCGTCGATGAATGAGAATCTTTCGAATTATA
TGTTTTTTTAGTAGGACTCATTTTGTTGATACTGACATTTTGTAAACGTTCCGAAACGGA
GGCTAATTCCTCTAAAATTTTGTCTCCATATGGCAAAGACGCAATTTTCTTTACACTAAT
TTCTCTTAGCGTATTCGGATGCTGTATGCTACAACCTTCATTAGTCAAATAAGATTTAGA
TACTCCTGTAACATGCTCTATAACATCATTAACATGGCTGGATACATTAGAATGTGTCTT
ATCTGTGACCTTAACACATATGTTATCGTTTGCAGTACTCTCAGATGCTTCGTCGTTATG
TAAATCAGATATGTCATTCAAAGATGTAGACGTAGGGTTATATTTAGCTGTGCTTTGTGA
AGAACAAACGCTACTCGAAGAATCTTGTCTGGTAAAATTTTCTTTGCAATTTTGAAAATC
ATTTGAACTTTCTGAATCAGACGTAACTTCTTTTATCAAGTTATTGAAAGCATCATTTAA
TTCACATTTAATCACTTTTATTTCCAAATCAAATTTGGTGTCACGCTTAGTAACATTACT
CTCATTTAAATTTTTAGTAATTTCTGAACCACTTGATTTACAAATACTCTCAAGTTTTTC
AATTTCATCGCCTAATTCTTTAACATAGAGATTTGTGTTAATGTTGTCCGTTGATAAAAC
AACAATTTCGTGTGATTCTGGCATTTCTTTGGTTGAAGTAGTAGGGAGGTCTTCCGTGGT
ATTTTTCTCTAATTCAATTTTAATAAATCGTTCATTATTGATACGTTTATTTTCCATTAC
ATCCTGATTTTCTAATTGAGAAGTATTATGGTCGTCGGATATATTTTGCCCAGAAGATAA
AAAGTTTTTCTTCAGCAAATGTTCAGTATCAATTACTTCGATTGTTGGTGTAATCATACG
CACAGAAACATCTGTATCGATACTATCATCTGTCTCTTCCTCTATTTCATGTATAGAGCT
GGTACTGCTTGACGAATCAGTTAAATATACTACTTCGGCACCGGATAATTTTTCAACAGT
TTTCATAGTCCAGTCGCCTCGAGCTTCACTCACTTCAGGTTCCTTTATTTTGGCATCAAC
TAAAACACATTCTTGAGACACAAGACGGCCTAATGATTTGTTGCGTAAGGCTACTGGTGG
TTTTGCAGCAAATTTCTCTCTTATAGCATTTGTATCTTCAAAAACGTCATCTTCTAAATC
TTCAAAGTCACTTCTTTTTTCACTCAAATATGAATGGCGGCGAGAAGTCATTGATGATTC
ACTACTACCTTCTTCATCAATAACATCTAGCATTCTTGGAGGACAAAGCTTTTGTGGAAA
ACTATCATCGGCCGATGCTTTTTTACGCAATCTGTGTTTTACTTCACGATTTATAATCTG
TTCGATTTCAGTTTTAATTTCTATAGAATTAAGATTATCTGGACTTGTCGAAAGATTAAG
TGTTTTCAAATAATTTCGCAACGATGCTTCTTGATCAGGAGTTAATGATTTTATATTTTC
GCACTGAGCCACATTAAGAGGTAGCGTAGTTATTGAAATACTTTCAGTCGCAACTTCTCC
GGTAAATGGGTTACGTGTTTTCAATTCATCAATTTTTTCCCAACCTACATCTGAGTCAAC
GTCTGTAACAATCACATTACTACAATCGATTATAGGTATATTACATGATTCAGAAACTAA
TAGTGTGTCATCGGTTATTTCGACAATTTTAGGATCATCATCATTGTCTAGGCTTTTACT
TTTTACGGAATTCGATATTTTTGGTGTAGGTTTCTTTTGTTCCGGAGTTTCTACAATGTA
AGTTTGAATTTCGTGAATATTGTCATTTAAGTCTGATATGTTTTCATTCACTGTTTCAAT
TAAATCGCATTGTTCGCCTTCACTCACTTCTTGAGTGATGACCTCTATCGCTTGAACAGC
AGCACTGCTTGGACTTAACAAATTTGTGTTAATGCAGCTTTTGCTGCACGAAGAAACATT
ATCAATTTCACACAAAGTTGTACTAGTTTCAGAGTTTTGATTTTCACTCAGGGAACTCTC
AATTGCTGAAGTCTCACAAGCATTTTTCTCACCGTTACTATTCTGTTGATTGTGTTTGTT
TTTACGTTTATTTTTATTTTTACGTCGCTTCGGTTTTTCGGGCATGTTTAAGATCCTTAC
ACTGTTATCACTAACACAACACGATCATATCACAAAACAGTCGTCGTCCGTCCTGTCACG
GCTTCGCGTCTTCGCGCTTACGATACCGGTATCCGTAGCGTAGGAGTTAGTTACGTTCTC
GACGAAGTAAGCCCTGCGCGTTGTCGGAATCGCTAGTTTTAGGCCGATAATTTATATTGT
TAGTACAAGGGCTCGCGTAACAGGGTCGACTGACTCGGATCAGAGGAGCTAGCGCCGGTA
ATCGAAAAGAAACGACGAACGTTCGCCGGCCGCGGCAGTCGTGCACTCGCGCGGCGATTT
ACTGATAATTATAAATGGGTTGAAGTACGCGAGCGCGCAGTGTCGACTTTATTTTTACGC
GGAGACGTGTATGCGAGTGGAGCGCGCGCGGTGCCGCCGGTATATCGCTGCGTAGGGAGC
CCGCACGTCGCTACCATCGCCCGGTCGATTCTGT
(6814 bp)

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