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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14217_c0_seq3
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_transcription_activator_BRG1_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003713 F transcription coactivator activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007409 P axonogenesis
GO:0007419 P ventral cord development
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007517 P muscle organ development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0022008 P neurogenesis
GO:0035060 C brahma complex
GO:0035172 P hemocyte proliferation
GO:0035329 P hippo signaling
GO:0036335 P intestinal stem cell homeostasis
GO:0042393 F histone binding
GO:0043044 P chromatin remodeling
GO:0043974 P histone H3-K27 acetylation
GO:0045088 P regulation of innate immune response
GO:0045742 P positive regulation of epidermal growth factor receptor signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048477 P oogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0070604 C RSC-type complex
GO:0070983 P dendrite guidance
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
GO:2000648 P positive regulation of stem cell proliferation
Transcript
Level		FPKM:11.12 TPM:11.19
ORF EntryO_BomoSK19269_complete:A_BomoSK_comp14217_c0_seq3
Sequence
(Nucleotide)
AGGGCGCGGCGGGCAAGCCTCCCGCTGCGCACGGCGGCGCGCCTCCCACCCCGCTGCCCA
TGACTGGACAAATGGCTCCACCTACACAGCACACGCCCCCCCTTGTTAATCCGCCGGTGG
GTGGAGTGCCGCTTCGTGGCCCCGCGCCATTGCGTCCCTCGGCTCCTGGAGCTCCCGGGA
CTCCACAAACGCAGCAGCTACCTGGAGCCAAACAAAATCGTGTGACCACCATGCCCAAAC
CTGTCGGAATCGACCCCGTGCAGATATTGAACGAAAGAGAAAACAGGATTGCAGCACGAA
TAGCTCATCGTATAGAAATATTATCAAACCTACCCGCCAATATGCCTGACGACCTTCGGT
TACAAGCTCAAATCGAGCTCAGAGCACTCCGAGTGATTAATTTCCAAAAGCAATTGCGTT
CAGAGATATTAGGTCAAGTCCGCCGTGATACAACCCTAGAGACCGCTGTAAACATAAAGG
CCTATAAGCGCACTAAACGACAAGGTTTGCGAGAGGCCCGAGCCACTGAGAAACTTGAGA
AACAACAAAAACTGGAGGCCGAGAGGAAACGACGACAGAAGCACCAAGAATTCCTACAAA
CAGTTCTTCAGCACGTTAAGGATTTCAAGGAATATCACCGTAACAACCTAGCTAAAACAG
CACGCATCAATAAATCAATCATGAACTATCACGCTAACGCCGAACGAGAACAGAAGAAAG
AACAGGAACGCATAGAAAAAGAGCGCATGCGGCGGTTAATGGCAGAAGACGAAGAAGGTT
ACCGTAAACTGATCGATCAAAAGAAAGACAAAAGATTGGCGTTCTTATTGTCACAGACTG
ATGAGTATATAGCCAGCCTTACCGAGATGGTCAAGCAGCACAAGCAAGAGCAACGTAAAA
AACAACAAGAAGAGGAACGGAGGAAGAGGAAATCAAGAAAGAAGAAGTTGCTGGAAGGTG
GAGAGATTGACGCTTTGGATGACAGCTCCCAGACTTCAGACTCAAGAGTCAGCGTCGTGG
ATCCTAAGTCTGGCGAAATACTGAAGGGCGAAGATGCGCCGCTGCTGTCTCAATTAAAGG
ATTGGATGGAGACACACCCTGGATGGGAAGTAATGTCTGATTCCGATGATTCTGGTGACG
ACAGCCAAGACGATGATGAAAAGAGAAAAGACAGGCACAGAGACGACAGGGGCGATCGCG
AGAAAACCGACGAAGAGAAAGCGCGAGATATGATTAAAAAGGCCAAAGTCGAGGACGATG
AATATAAAACTGAGGAACAGACCTACTACAGCATTGCTCACACAGTTCACGAGTCCGTAA
CAGAACAAGCTAGTATTCTAGTGAACGGAAATCTCAAAGAATATCAAATAAAGGGCTTGG
AATGGTTGGTGTCACTATTCAACAATAATCTTAATGGAATTTTGGCCGACGAGATGGGCC
TGGGTAAGACCATTCAGACTATTGCACTGGTCACCTACCTCATGGAAAAGAAGAAAGTGA
ATGGACCTTATCTAATTATCGTACCGTTGAGTACTCTTTCAAACTGGGTATTGGAGTTCG
AGAAGTGGGCTCCCACAGTTTCGGTCGTTTCCTACAAGGGCTCTCCGCAGTCGCGTCGCC
TGGTGCAAGCTCAGATGCGATCCACCAAGTTCAATGTGCTGCTCACTACCTACGAGTACG
TCATCAAGGATAAGGGAGTTCTCGCCAAGGTACAATGGAAGTACATGATAATTGACGAAG
GTCATCGGATGAAAAATCATCACTGCAAACTAACACAAGTACTAAACACTCACTACATCG
CGCCGCACCGTCTGCTCCTGACTGGTACGCCGCTGCAAAACAAACTACCAGAACTCTGGG
CACTACTGAACTTCCTATTGCCATCTATATTTAAGAGCTGTTCTACTTTCGAACAATGGT
TCAACGCTCCGTTTGCAACAACCGGTGAAAAGGTGGAATTAAATGAAGAAGAAACAATTT
TAATTATTCGTCGTCTGCATAAAGTATTACGTCCGTTCTTGTTACGACGACTGAAAAAAG
AAGTCGAGAGCCAACTACCTGACAAAGTCGAATACATCATCAAGTGCGACATGAGTGGGC
TACAGAGAGTACTTTACAAACATATGCAGTCCAAGGGAGTTTTGCTGACGGATGGGTCTG
AGAAAGGGAACAAAGGAAAGGGTGGCGCTAAAGCTTTGATGAACACGATCGTACAGCTCC
GGAAGCTGTGTAATCATCCCTTCATGTTCCAGCACATAGAGGAAAAGTTCTGTGATCACC
TCGGTACTGGTGGCACTGTTGTTTCCGGGCCAGATCTATACAGAGCTTCCGGCAAGTTCG
AGTTGCTTGACCGGATATTGCCGAAGTTGAAAACAACTGGTCACAGGGTGCTTGTGTTCT
GTCAGATGACGCAGTGCATGACCATCATCGAAGATTACCTTTCATGGAGAGCTTTCCAAT
ATTTGAGATTGGACGGTATGACCAAGGCAGAGGATCGCGGAGAGCTACTGAAGAAATTTA
ACGACGCCAATTCTGAATATTTCATATTTTTACTGTCGACTCGCGCTGGAGGTCTCGGTC
TCAACTTGCAGAGCGCTGATACTGTTATCATTTTCGATTCGGACTGGAATCCGCATCAGG
ATCTACAAGCTCAAGATCGTGCTCATCGTATCGGCCAACGGAATGAAGTACGTGTGCTCC
GACTCATGACCGTCAACTCTGTAGAAGAGAGAATTTTAGCTGCTGCCAGATACAAATTAA
ACATGGACGAAAAAGTCATCCAAGCTGGTATGTTCGATCAGAAGTCTACTGGATCTGAGC
GGCAACAGTTTCTGCAAAGTATTCTGCATCAAGACGGAGATGATGAAGAGGAAGAAAATG
AAGTTCCCGATGACGATCTCATTAATGCAATGATAGCGCGTTCGGAAGAAGAGCTGGAGA
TATTCAAACAAATTGATTTGGAACGTAAAAAGACTGAGAAACATTCAAGGCTTATCGAGG
AGTCAGAGCTGCCAGATTGGCTCGTGAAGGACGATGATGAAGTTGTCTGCAATAAGGGTC
AAGGCTGGAATTATTTAGATGAAGACGAGACCCTCGGACGCGGGTCGAGACAACGCAAGG
AAGTTGACTACACGGACTCGCTCACGGAGAAAGAGTGGCTGAAGGCTATCGATGAGGAGT
TTGAGGAAGAAGAAGAAGAAGAAGACGACGAGGATGAAGTTCTCGATAAGAAGAAGAAGA
AGGGACGTAAGCGACGACGAAATCAGGACGATTCTGACGAAGACGAAGTACCCACATCAT
CCAAGAAGAAAAGCAAAACAGAAATCAATCTTCTGAAGAAGAGACTGAAAAATATCATGA
AGAAAATAATTGATTATGCAGATGAGAATGGACGAGTTTTGTCTGAACCATTCATGAAAC
TGCCGTCGAGACGTGAGTTACCTGACTACTATGATATTATCAAGAAACCACTGGACATCA
AGAAAATCGTTAATAGGATTGAAGAGGGCAAGTACAACGATATATCTGATTTGGAGCGGG
ACTTTTTCACTTTATGCGCCAATGCGCAGACATACAACGAGGAGGCCTCACTTATATACG
AAGATTCCGTAAGACTTCGGAATTTATTCATAGAACTACGACGAAGACACGAAAGTGGAC
AGAATTCTGATGATTCTGACGAAAATGAAAAAGATGAAGAAGATTCAGATGGTGAGTTTA
ATAGATCAGTCAAAATGAAAATTAAATTGAAAGGCAAAGGAAAAAATACCCCTTCCAGGA
AAAGGAAACCACGGAAGCACATCTCGGATGACGAATATTACGAAGAAGATTGAATTTGGG
TGAAACTAAATTTAAGATTCATTTACATTCATTTAAAACTATTATTATAAATAAAGTAGT
AAATACTGGTTTTAAAATGTTATTCACTCATATATCATTTGAAGTCAGTGCTGGTTTCTT
TTCGATTCTATTTCACATATCCATGTAGAAATAAAGCAAAATGAACATGTTTCCATATCA
AAATAACAGCTTTTTACTAAATGAATATGAATGAAACACTGTACTGTATTTATTATATCA
AGAAAAAAAAATGTGTCTGTTTGTTCTTGTCAACTTCCAAACGGCTGGGCCCCTTTTGAC
GATTTTCAATGGCAAACTACTGACTTTATTAAGAATAAGTTAAGCTACTTCTATTTTCAT
TATTATTTAAAGTTTTTATTTTATTTTTAATACCTGACAAAGCCACAGCCTGGCCGAGTT
TAGCTCGTTTGTTATTAGTATAGGTTCTATATATCCGTTCGGGCATATGAGCAATACCAC
CACTAACTTGAGACACTTGTCAATTGAAATAGTAATTGCTACGTTTCAATACAGGAATAT
TGCTTAACATTAGAAATATGAAAAACAGTGGTATCAGCTTGTGCGGATTCAAAACTCATT
ACCAGAGGCGGGTTTACTTAAGCAGGTTGTGCATTGCACACGGACGCTACATTGTTTAAA
GACACCTTTGCTCATGACCAATACCTACTACAAACAGAAGTTGTAGGGAAAGTTCGGTAC
ATAGTGGGGTTACTACCATGAAGTAACCATGACGATGGTGGTAAATATAACTGTCTGTCG
GATTAACAGTCGTACAGACTGGTTCTTTGATAAATTTTGCTGTACTGTACAAACATTAAA
TATAACTAGTAAATATATAGTCGAAGTGTGTACTTTTATTTTACGTTTCCCCACTTAACA
ACAGTGTAATAAAGGCTTTTTGTGACTCCGCATGGCTCCATATCATTAGATTTATTTAGG
TTATCTTTCTCCATCATCCTTTTCATAACAAAAACTTAAAGTACTACAATTTTCGATTTT
CTGGTGTTTAAAATTGAAATAAACTATATAGTAAGTTTTTGCATTAAAACTGAAAATTTT
TAAACAAAAAATTCTTAGACTTTTGTATCGATTAAGTTATCTCCTATAATTGAGCTAACA
TCCAAAACATTTAAATTGTCTACAAAGTCCTTTACATTACATACTTATTTTTAAATCATT
TTAGTATTTAAAGTTAGTAGTAATTGATAGTGTTTTAAAACTATGAAGTATTGTATTATT
AAAAATTAGAACTGTGTTAAAAATAGTTACTGGTGTTTGGATGTCTTGAGAGTGCACAGG
TACGAACCACCACCCTGCCTTTTTCTGCAGTGAAACAGTAATGTATTTCGGTTTGAGGGG
TGTGACAGCCGTTGTACTATACTGAGACCTTAGAACTCA
(5259 bp)

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