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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14200_c0_seq1
Scaffold_idBomo_Scaf002
NCBI non-redundant
(nr)		PREDICTED:_protein_shuttle_craft_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007399 P nervous system development
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:4.38 TPM:4.41
ORF EntryO_BomoSK19078_5prime_partial:A_BomoSK_comp14200_c0_seq1
Sequence
(Nucleotide)
GACTATTTGATTTTTGATTTTTTCACTTCTATTCTTCCTATCATTTGTCATTACGCGAAA
TTAGTGCAAATTGTTATAATCTTTTATTTTTGTATTTTAAATTATTTTTGGAAAGTAAAA
GTCGCTTAAAACAGCTAAGGATCTAAAATCCGCTAGTTTTCGGCCTTGGGCTTCGGCCTG
CAGGCTCCATCCCTCCTCAAACATAAAATATATTTTATTTTATTCTAAGAACTCAATTAT
TCATCATCACTTTCGCACAACGATTTCACAACATTACTCAGGCAACTCTCAAACCATGTC
GCAGTGGAACAACTCTTACTCCTACAATGGTCAATACCAAGCCAACGGCTGGAACCGAGA
TGTTAATGGCCAATATTCAAATTCACAGTATTATAATAACAGGCAAGATTCAAATAATCA
ATATGTGAGCTTCAACGAGTTCTTAACTCAAATACAAGGCGACAGTGCATCAGTCCCGGG
CAATTCGGTTCATTATAATAATGTAAGATATGAAAACTATCCCACCACTCAATACAATTA
TCAGAACATGCCGTCTACTTCACAGAATAGATCACTAGATAGTTACAATTATCAAACAAA
TGTGAACCCAAGGAATCCCCAACAGTACCAAATGAATATGCAGAATCAATATGTGCCATC
TGAAAGCTATAATAATGAAATTATACTAAAATCTAACTTAACACCTACTGCAACAGAATT
TGTACCAAAGAGTATGGCTAAACAGATCACTGGTCACCAAAGTTTAGCAGAACCTGCAAC
TAATAACGTTAAGCATAATGATGCAAACTGGAGAGAAAGAGAGAGTTTACAACAAAATGG
TGAAATTGTAACTAATCAGGTTTCTGAAAATAACAAAAGCCAATACTCCAAAACTCAAAA
CAGGGTACCTAATAGCCAAGATAATGCACATTCAAATGAATCCAATGTTAAAGTTAACGA
ACCAAGGCACAGAAATGGACATCGTAACAATGAGGCTAATGGTAGTTACTACAATCAAAA
TAATCAAAGTGAAAGTAAATCTCACAGTAATGAAATAAATAACCATAGTGATTCAAGTAG
TAGATACTATGAAAATCAAAGAAATTATGATAGGAATGAGAAGAAAATCATATCAAAGAC
GAATCCCAAATCAAAACCAAGAGATGCAGATGCTCGTACATTCTACAACAGTTCCATTAC
TAAGGACAGTCAAGATGTTCGGAATGGAAGAGGTGAGAGTTCTGGCAGGCAAAGGAATTG
GGCTGGAAGTCAAAGAATCAAATCTTCAGAGAAGTCAACTCCTGAAGATGAGCAATATGC
TACCTCATACACTCAACAGAAACAGGAGAAAGTAGAGAGAAATAAAACAGAGAACATTCC
AAGCCCAAACAGGTTTAGAAGCAAAAATATTGAACAAGCAATAAACAAAGAAATGACACA
AAGGGAACGCCTGACTGATCAATTAGAAAAAGGAACATTAGAGTGTCTAGTATGTTGCGA
GAGAGTAAAACAAACAGAATCCGTGTGGTCGTGTGGCAACTGCTACCATGTACTCCATCT
TAGGTGCATAAGAAAATGGGCAATGAGTAGTTTGGTCGAGGGTAAATGGCGTTGCCCGGC
TTGCCAAAATTCTAATGAGACGATTCCAACTGCGTGTCGATGCATGTGCGGCGCGATACG
ATCGCCTGAATACCAGCGAGGTGTGTGCGTCGCCCACACGTGCGGGAAGCAATGCCGTCG
CCCTCGCGCCTGCCCACATCCATGTACATTATTATGCCACCCTGGACCTTGTCCACCGTG
CCAAGCCACCATTACAAAAGAATGTGGCTGCGGTGCCGAGACTCGATCAGTGATGTGCAG
CAGCAAGCTACCGCAAGTGTGCGGGCGTCCTTGCCAACGCATGCTACAGTGCGGCGTACA
CAAATGCATGAAGGAATGCCACGAGGGTCCCTGTGCAGACTGCACCGAG
(1969 bp)

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