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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14198_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_protein_muscleblind_isoform_X5_[Bombyx_mori]
Ontology
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001654 P eye development
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0007601 P visual perception
GO:0009790 P embryo development
GO:0010468 P regulation of gene expression
GO:0030018 C Z disc
GO:0031673 C H zone
GO:0042052 P rhabdomere development
GO:0045924 P regulation of female receptivity
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050896 P response to stimulus
Transcript
Level		FPKM:20.04 TPM:20.16
ORF EntryO_BomoSK19051_complete:A_BomoSK_comp14198_c0_seq1
Sequence
(Nucleotide)
GTCAGTTGTTTATTATCTATACTGTACTCAAAATTGATCCGAAGATCACATCACATAGTA
ATTTCATAAATAATAATTACAATGTCATGTTTTTTTTTTTTTCTCAATCTGTGGTTGTTC
GTGAATAAAAAAACCTTCACAATATTATTATTCATAATTTGTTCACTGGACCGGTTTACA
TTTAAGTAGACAGTAGGTACATACACTACACGTTACAATACCGTCATTAAAGTACTCAAA
CAACTTACAATGTATTTGATGAGAGATATTATATTATAATAGTAAATTATTATTGTGTTG
CAGTTCATTATTATTTTTTTTGTCAATATATTTACAGTTTTACATATTTTTTTTTGTGAT
TTACAAATAAATTCTTGAATATTAAATTAGGTCATCATTATTCCATTTGGATTTATAATA
ACAGTACTTTATAGTTAAAAATATCACAAAAATGAAATATATTATGTGTAAGACACACGC
AACATTAAAAATACAACAAAAGAAAAATATAAAATCCACTAGAAACCTTGGGCCAGACAG
TCCCTTCTAAACAAGGAAGGATACTTTCGATGTTCATCTTTTCATAACGGCAATTTCATA
CCATAATTATTATTATCACACTAATTAATTAATTATAAAAGTAATCGATTGTCTTACAAT
AAATGCGTCAGATCATAAAATTTTGATTGTAAAATTATAGGCAACAAATAATATTCAAAG
AAACGATAAATTTCAACAAAAAAAAAATATTAAAAAAAAATATATTTATGCCAACTTATA
CATAGAGCCATAGTGCCGTATTGATAAAAGCGAACTGTTCACCTTAGCCACTAGCACGGG
ACTGATACAACAACAACCAACCAACCAACATAAACAAACGCTACTCACGAGTTTGACTCC
GCATCCGATATTCACCTTTTATCGATATGGCATTCCACTTACGTTTACGACAATAAATAT
ACATAACACGCTTACACATTAGTCACTTCTTTAATTCCGACGCTAGGAATTATTTCATAA
TATATACCTAAAAATATAATCACGGCACAAGTATCCCTCCGACTAAATTACTAACGTAGT
GTCACTTTATCAGGATTTAGAATCAAATATGTATTATGTATCTTAAATATTTCATTATTA
ATATATCATTATCAAAATATCCACTAAATGGGAGGAATAAATCAAATTATTAATATTTTA
TTTCTAACATTAATCGCATGACTGATCAACAAAAGGATATGGACTAGGAATAATATTAGG
CATTAGGCTTCCATGCCCTCGGAGTGCGTGCGCGGTACGAATCGGACGCGACCGACGATT
TCCCATCACTTGCACTCGGCGACGGGCTGTTAAGGACCGAAGCCGAGCCAGTGCGCGCAC
TCCGCCTCTCTCTATCCGCATACCACCTCTAACGTACGTACCACCAGATAAATTTCATCA
AAACCTTAATACTGTTTATGTCGAAAATAATAACACAGCTATTTATTATACGCAACGAGT
CGACACCGGACCCGATTATCGTCGGTAACGATTTGTGCATATCGATATTATAGATGCAGA
TTATTGATTTTTATTTTTATTTATTTTAGAAACAAAACGATTCTCTAGCAAAATCTATCC
GGAATAAAAGCCGACTTTCTACATACTAAAATAGCTTGGAAGTTTGCCTTATTCGTTTTT
CAATATTGTCCGATAACTTCTTTCATTGTATTACGAATTCATGTTTACTATATATCACTC
TACGAGTGTGACGCTAAGTGCGAACGGAACGCGAGGCGGCGGGCGCGGCGTGCGTCACAG
CCGTCACGACCGGACGACGCCGTGACGCACTGTACAGTAACGGCACGAGATCGTGGGATA
TACAATAGTTATGGAATACAGGCCGACGGCGTTCGGTACTGTACAGAATTGCGCGCGTGC
CGACCTCGTCGCTTGTGACTTGTGCTCCGGCGTCGAACCTCTCCGCGCCGGAGGAGAGAA
GCGGCTACTCTATTGGTGTTCCGTTACTGATTCACTTAAATTCTAAACTAGTGTAAACTT
GTCCTCTAGAAAAACGTAATTATATAACATACGTAAAAAAAATGTAAAGTAAATCTCACA
AAAAAAATGCTCTTACAGGGACTGGGGTGATTTAGGCATCAGACACTGACCGAGGAGTCG
AGAGCCGTCCGTCTGGTCGTCTCCTGTCATCACCGGCCACACGCGTCACTTATACACAAC
AAAGTACCCGGGCGACCAGGTCCCGGCTATTACAGGAACTCATATCGTTTCTTAAAAAAA
ATTATACATTAGTCATAAAATATTTGAAACCTCACTAACTACTGCTCGACGATTTCGACA
AATTAATTCCATACGGCTCCGGCTTCCCGAAATCTATTCATATCACAATCGCATGACCGT
GCCTGAGAATCATATCCCGCTACTTATGTACACACTCTTTCCCGAAGACTTACGCTCATC
CTGCGCGGGAGCGAGCCGCGGTCGCCGCAGCGTCCGCGACTCGGCTGCCCCTTTCTACAC
TAACCGATTTTCACTAAAATATCACCACCTCTGCCGCGGAAGCGACAGCAACATCCGGCC
GAACCTGCCCTTCCTGAGTGTGCCAGAGGCGCGATCGATATGGATTACGCAGGGCGCGGG
CGACGATGTCAAAGGACGAGGATTGAGGTGAGGGGGGTTGGGGGGTTAAAGAGGTGGAAG
GCGAAGGATGAGGGTGCAGGGTCGTGGGTGGAGGGTTAAGGGGGACGCAGAGCCGGTGGC
AATTGAACGGGGATGTGGTAGTAGCGGCAGGCGGCGCGGCGGCACGTGCCGGCGGCGGCA
TCGCGACACACCACCACGCGGCACCCCACCACCTGCAGCCCGCACCCTGCAACGTGCACA
CAACACACTTACTCTCCGACTAAAGCTAGGTTCACATCACTGTGGCGGGCTGCGTCGCGA
CTCCTCTCCATCTTATTGTTGTGTTGCGTTGTACTTGCACTAAGATGTCTGTGGTACTAG
TTTATATACGTAGCAGCCGCGACATTTAACTAGTTGAGTCACAGTGGTACGGCGATATTA
AATATTATACTGATATAACACTAAATGCACGCACCGATCGATAATCATTCATTCGTTGGA
AAGGAAACGAGTAAGATTCTATAATCTGCTATAATATCCCAACAGTTCTGCGGGATATAT
AAAAAAATTCACACAGCTGAGACACACATTTAACTTATTCGAAATACGCGTCACACAGCG
CAACACAACAACAGATACCAATTAAAGTGCCCGTTCAGTAACATGAGCCCAGCTTTACAC
AGCACAACACACATCGCTAATCTATTACCCAATTTTGTCGCATCTCATGTACCTCAACTA
TGGATTTAGATGAATGAAAAATAAATAAATAAATTAATAGGACACGAAAATCGAGATAAA
CGAGTCATACACAATTCTTATACGCATCGAGTTCGATCAATACTATTAATGAATAGATAA
ATCAATGTTCAAACTATAATAGAACATTACTGTGTGTTGCCTACACGAAAATACACGTAC
CGTAAGGTTGCAGACTACATTTGACAACTACAATTATGAAAATACAGGAAAGAGAAAAAT
ACAGAATAGAAGAGACATCAAATCGAAACTAATTCGATTGATCTACAATCACAACAATAT
ATTGAGAAACAACACTAAAAACATCTAAGTATATATTCGTATTAGTGAAATCTAAATCTA
TGTTACAACATCAAATCATGCATACAGGTATTGGATAAGGATAGTACGGTTAAATAATTT
TATAATTTATTGACCGCAAACGGTCGTATTATATAATATATTATATATTTTTTTTAAATT
TCGTTTTAATCGTTTCATGCTTTCGATTTGTTCATAAACAGCCAATCGTTTCGACATAAA
TCGCGTTGTACGAAGAATGTTGTTGATAGCTCACCTTCGCGAATATGAACGAATCTGCAG
GTAGGTCTTGAACATCCTTGCCGATTAAAATCTTGGCACACCGGGAGGGTGTCCAGTAAA
TGACACGGGCACGAACGGCTGCTGGAGCTGCATCAGTTGCTGGTAGGTTGTCGCCGGCTG
ATACACTGGTACACCAGCTTTGTCGGCAGCCGGTCGCTTGTACGGCACCACGCCGGGGAA
GGCAAAGTTATCATAATAGAAGGAACCGACGCTCTTCATGTCCATCTCGAGACGATCGGT
ACGAGGCAATTTCTGTTGCAGCACGGGTTGCTGCATGACACCGAGTGGCGAGGCGGCGGC
GGCTGCCGGATCGTGACCCAACATTGCGGGCACCAGCTGAGGTGCATAGTACTGTGCGTA
CGTCGATCCCACGCCCGGCACCCCCGACAAATAAGGTGACGTCGCCACGGCGGGCACCTG
ACCGGGCAACACTTGCCCGGGTGTCAGACCCATTTGCTGCATTAGTGCGTTCTTCAGGGC
TAGATGATTCCTGCCGTTGATCAACAGCTGATCCTTCAGGTGTTGTGGCGGATGGAAGTA
TTTGCAGGGTGGCTTCTCGCGGTTACACCGTCCCTTGATACTGTCGTAGCAGGCGGTGAC
TCTTCCATTCTGCACCTCGACGGTAGCCGGGGGATGCGCAAATTTGCATTCAGTATCTGG
TCGCGAGCACTTATTCCGCTGGAACTCCCTGCATACTTCGAGTTGTAACCAGCGGGAGTC
CTTGCCGTTCAGCAAGCTGTTCATGTTCACCATGGTGGCCATTGTTGGCTATGTCTTCAA
AGGAGGCGGTTTTCGCGCGCACTTTTACGCAGTGCGAGTGCGGCGCATAGGCAGTGACAG
CGGGCGAGCGCGACGGCGCGCTCTTTGCATGCACTTCTCACACTGGTTTGTCGCAAACTA
CTCTTGGCCACTGGAGGCTCTCGCGCACCCTCACTATCACACACTACTGCACACGCGAGA
AATATACTTCCGCAGCGGGAGACGCGCGGATACGATGATAGTTACTAACTAATTGATTAA
TCCTTACAATTAAGTTAGAATTAAAGACACCGACGTTGCAAGCTTATAGAGGCGAGTATT
AAATTATTGTTATCACACGCGTTTTTATAGATATTGACTGATGAGTTTAGTAGAGGGCGA
GCTGTGCTTGGTGCGCGAGCATTGCGGCGGCCGGTGTGGGTCTGGGCTGGCGACGGTGGG
GCGCGAAAAAAGCTAGATTAGCGGCTCGGCGGTCAGCGAGCAAGCCGGTGCGGTGCGGGG
CTCAACTATGATGAGGGGTAAAACAAGCCGGGTAAAGGGAGCTTATAAAATGTCCAAAGT
CAAATCATATTAAGATGCACGTAAGTTAGGAGAAGTATATCGTTGGTAGCGTAGAAGGTC
GCGGTTCGCGGCCACAGCGGGGCGGCACGCGTCGTGATCGGGACACGAGTGCGGTGTACA
GAGCGGCGCGAGTCACACAAGCACAAGCAGAGTCGGCGGGCCGCCCCGCTG
(5451 bp)

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