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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14194_c2_seq7
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0001525 P angiogenesis
GO:0001756 P somitogenesis
GO:0001840 P neural plate development
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0009952 P anterior/posterior pattern specification
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021514 P ventral spinal cord interneuron differentiation
GO:0021523 P somatic motor neuron differentiation
GO:0021531 P spinal cord radial glial cell differentiation
GO:0021986 P habenula development
GO:0030154 P cell differentiation
GO:0031016 P pancreas development
GO:0031017 P exocrine pancreas development
GO:0035907 P dorsal aorta development
GO:0042663 P regulation of endodermal cell fate specification
GO:0046872 F metal ion binding
GO:0048259 P regulation of receptor-mediated endocytosis
GO:0048337 P positive regulation of mesodermal cell fate specification
GO:0048699 P generation of neurons
GO:0048936 P peripheral nervous system neuron axonogenesis
GO:0050768 P negative regulation of neurogenesis
GO:0050793 P regulation of developmental process
GO:0055016 P hypochord development
GO:0060271 P cilium assembly
GO:0061314 P Notch signaling involved in heart development
Transcript
Level		FPKM:0.34 TPM:0.35
ORF EntryO_BomoSK19045_complete:A_BomoSK_comp14194_c2_seq7
Sequence
(Nucleotide)
ATAGTATCATCCGCAGTGGTGGAACGTCCGACACCTTGTATACCATCACCATGTGGTGTT
AATGCTGAATGCAGAGAACGGAATGGTGTTGGATCTTGTATTTGTTTACCTGACTATTTC
GGAAACCCATACGAAGCGTGTAAGCCAGAATGCATTCAAAATTCTGACTGCCCTTCGAAC
CTTGCATGCTACAATAACAAATGCAAAGATCCATGCCCGGGCACTTGTGGAATTAACGCT
CAGTGTAACGTCGTTAATCACAATCCTTCGTGTTCGTGTATTGAGAAATATCATGGAGAT
CCATACAAGATGTGCGCATTTAAAGCTGAATCGGAAATTTTAGACCCTTGCGAACCTTCG
CCGTGTGGACCTAACAGCCAATGTAAATCTCAAAACGGCTTGGCGATATGTACTTGCATG
CTTGGCTATCAAGGAACACCACCTTCTTGTCGCCCAGAATGTATCACTAGTTCAGAGTGC
TCTCTAGATAAAGTCTGTGAGAACTTTAAATGCAAATCGCCCTGTGAAAGAGCTTGTGGA
TTAAATACAGAATGTAAAGTGATAAACCACAATCCTATATGTGTGTGTAAACCAAAATAC
ACAGGAGATCCATTCACAATATGTTATGCATTACCTGAGCAACAGCCACCCTTAATGGAA
CCAACAGATCCGTGTGTTCCTTCACCGTGTGGATTAAATGCGGAGTGTAGGGAAATCGGT
GGAGTTCCGTCTTGTTCCTGTTTGAATGGATTTTTCGGAAGTCCACCTAACTGTAAACCA
GAATGCATACTCAATTCGGATTGTAGTAATGACAAATCGTGCATAAATATGAAATGTCAA
AATCCTTGCATTGGTTCATGTGGGCTAGACGCTTTGTGCAATGTTGTGAAGCACGTTCCT
GTTTGCTCTTGTCCTAGTGGTTACGAAGGAGATCCATTTTCCATCTGTCACATCAAGCTT
CCAGAATTACCACAATCAGTAGATCCATGTCAGCCAACTCCATGTGGACCCAATGCTGTA
TGCCACAATGGCGTATGTTCCTGCTTACCAGAGTATCAAGGGGACCCCTATTTTGGCTGT
CGGCCTGAATGTGTATTGAGCACCGATTGTCCTCTGGATAAGGCTTGTTTCCGTTCAAAG
TGTGTTGATCCTTGTCGTGACATGTGCGGAGTCAATGCAGAATGTAATGTCTACAACCAT
GTCGCTATATGTAGCTGCCCAATGGGACATACCGGAGATGCATTTACCCATTGTAAAATA
ATTGAAAAACCAGCCAATAAACCTTGTGAGCCTTCGCCTTGTGGACCTAACAGTGTTTGC
AGAGAAGTAAATGGACAGGCAATCTGCGCTTGCATCGAATCTTTTATTGGTAATCCGCCA
AACTGCCGACCTGAGTGTATTCAAAGTACAGATTGCTCTCCCTCAAAAGCTTGTATAAAT
AGAAAGTGCCAAGATCCATGTCCAGGATCGTGTGGTCGAAACGCTATATGCATTGTTAAC
AAGCATAATCCTATATGCAGCTGTCCTGCAAAGTACACAGGATCTCCATTCACTTATTGT
TACGTTCAATTAGAAGAAGAGCCACAGTCTAATCCATGCGTACCATCGCCTTGTGGACCA
AATAGTCTATGTAAACCAACAGCTGACGGGAAATCTTATGTGTGCACATGCCAACCATCT
TTTGAAGGAACTCCACCTCTATGTCGTCGCGAATGTACAACAAGTGATGATTGTTCGTCT
GACAAAGCTTGCATTAATTACAAATGTTCGGATCCTTGCCCTGGCTCCTGCGGTTTGAAC
ACGCTTTGCGTCGTTCGACTGCACACACCTATGTGCTCATGTGAAAACGGGTACACTGGA
GATCCATTTTTATCATGCTATCTGATGCAGCCAGCACATGAACCAGTTGATCCTTGCAAT
CCTTCACCTTGTGGCGCCAATGCTCAATGCAAAGAAACACGTAGCGGCGCAGTTGCTTGT
ATTTGTGAAACTGGATATTTCGGAAATCCTTACGAATCTTGCCGACCAGAGTGTGTGGTT
AATACTGATTGCCCATTTAACAAAGCGTGCCTAAGAAACAAGTGTGATGACCCGTGTCCC
GGTGTTTGCGGCTCTACAGCAAATTGTGAAGTTATTAATCATGTACCATCTTGCACGTGC
GCGCCAGGTTACACCGGAAATCCGTACACGTACTGTCATATCATCATTAATGAACCAGTA
CCGAAACCGAAAAATCCTTGTTTACCGAACCTCTGTGGCAGTAATACTATATGTAACTAC
TCCAATGGCCAAGTATCGTGCTCATGTATGCCTGAGTTCTACGGCTCACCACCGAATTGT
CGTCCAGAATGTACTGTCAATGCTGAATGTGATAAATCGAAAAGTTGCATAAGACAAAAA
TGTATTGATCCTTGCATTGGAGTGTGCGGACAAAATGCAGAATGTAGAGTTATTAACCAC
GCACCTATATGCTCGTGTAGTCTTGGATTTGAAGGTGATCCGTTTATTAGGTGCATGGAA
AAGGAAAAAACACCTACGCCAATTACCAATCCTTGTATACCATCTCCTTGTGGATCCAAT
TCTATTTGTCAAGCTGTAAATGAAATACCGATGTGTTCGTGTGTAGAAAAATATATTGGT
TCGCCGCCGAACTGCAGAGCGGAATGTGTCATTAATTCTGATTGTCCAAGCACTGAAGCT
TGCATTAACCAGAAATGTAGAGATCCATGCCCTGGCTCTTGTGGTCTTTACACAGAATGT
CACGTTTATCAACATTCAGCCATATGTAGTTGCAATGAAGGGTACACCGGAAATCCTTTC
CAGAGCTGTCAAATCAAGCAAAATATTGAACCTGTTCCAAGTACATATGATAATTGTAAT
CCAAATCCATGTGGCGCAAATGCTGATTGCAATGATGGAGTTTGTAAATGTAGAAATAAT
TACTTCGGTAATCCCTATCTTAGCTGCCGACCAGAATGTACTCACAGTTCGGAATGCGCA
AAATCTTTAACATGTATTAACAACAAATGTACAAATCCATGTATTAATATATGTGGTGAA
AATGCCTTGTGTGAAGTATACAATCATATGCCTATGTGTAGCTGCCCTCCAAATACAACT
GGGAATGCATTTTTCTCGTGTACACCGATTAAAGTAATCCAGGATACGAACCCTTGCCAA
CCATCTCCTTGTGGTCCAAACAGCGTATGCCGTGCACTTTCAGGACAAGTAATGTGCTCT
TGTATAACTGGTTACATCGGTACGCCACCATCTTGTAGACCAGAATGTTTAGTGGATTCT
GATTGCACGATTCTTTTGTCTTGTTCGAATCAAAAATGTGTAGATCCATGTCAAGGTTCA
TGTGGAATGAACGCTGAGTGTAGAGTTCACAACCACAAACCAATATGCTACTGTAGGAAT
GGACTTACTGGTGATCCTTTCTCTTACTGTAGAGTTATTCAAAAAGAACCACCAAAAACC
GCACCATGTGAACCATCGCCATGTGGACCAAACTCTGTTTGTAAATCAAACGGCGAAGAG
CCACAGTGCCTATGTCAAACTGGATTTATTGGGTCTCCTCCATACTGTCGTCCAGAGTGT
ATTTCTAATAGCGAATGCAGCTTCAATAAGGCGTGCATCAACAATAAGTGCGACGATCCC
TGTCTTGGAGCATGCGGTCCTAACGCTGAATGTCGAGTTATCAGTCATTCACCACAATGC
ACTTGCCAATCTGGCTATGAAGGAGATGCATTCAATTTGTGCCACCCTAAACGAGACCAC
GAACCAGTCACACCTTCCGAACCTTGTGTTCCAAATCCCTGCGGTCCGAATGCTATCTGT
CAAGAACGTTATAATATCGGCAGTTGTACTTGTGCGAATGGTTTCTTCGGTGATCCTTAC
GAAGGTTGCAGACCTGAATGTATTGTTAATTCTGATTGTGCCGAAAGCAGAGCTTGTATA
AACAAAAAATGCCAAGATCCTTGCCCAGGGCTTTGTGGAGTAAACGCTCAATGCCAAACA
ACTAACCACGTTCCATCATGTACTTGTATACATGGATATGTGGGAAATGCTTACGAAAGC
TGTATACTCAGAGAAGAAAAACCGACAAACCCATGCTCACCGTCGCCTTGTGGTGCCTAC
AGTACTTGTAAAACTATAAGCAACCAGGCAGTTTGTACGTGCTTGCCAGATTACGTTGGA
AATCCGCCAAGTTGTCGACCAGAATGTATCATTAGTTCGGAGTGTCCCTTGAATAAAGCA
TGCGTTCGTAAGAAATGTGTAGATCCATGCATAGGAACATGCGGGGAAAATTCAGAATGT
CGCGTACATCAACACAGTCCCTATTGTACTTGTCTGCCAGGCTATGAAGGCGATCCCTTT
ATAAGATGCTCTAAAGAAATTTTATCCACTCCACCTGTTGCCTCACCTTGTGAACCGAGT
CCGTGTGGGCCATTCGCAACATGCAGAGACATAAATGATTCCCCAATATGCAGCTGCAAG
CCAGGATATATCGGTGCTCCACCTCGCTGTGCACCAGAGTGTACTATAAATGAAGATTGC
CCTAACAACAAAGCGTGTGTTCGTGAAAAATGTGTAGATCCATGTCTTGGATCTTGCGGT
ACTCATACCGACTGTCGAGCAATGAACCACGTAGCTATTTGTACTTGTCTTTCCGGATAT
CGAGGCGATCCGTTTATTGGTTGTTCATACCAAGACATTCAGCCACCGGTGTCATTCGAC
GCATGTATTCAATCACCGTGTGGTATTAACGCGGCGTGTGACAATGGAACGTGCACTTGC
ATTAGTGACTATCATGGCAATCCGTATATAGAATGTAGGCCGGAGTGCACTAGTGACAAT
GATTGCCAAAAACAACTAGCATGTGTCAACTATAAATGTATTAATCCTTGTAAAAATGCT
TGCGGGATTAATGCGGTCTGTAATGTTTACAATCATATTGCAATTTGTGAATGTCCTACG
CCACTTCAAGGAGACGCTTTTATATCCTGTCATCACGCGATTGAGCCATCAATATCAGAT
CCATGTACGCCTAACCCTTGCGGACCAAATAGTATTTGTCGTGCTGAAGGAATCGTAGCG
CACTGTTCATGTCGGCCTCCAATGTTCGAAGATCCTCCAAGCTGTCGACCAGAATGTCGC
GTAGATTCAGAGTGTCCACCTAACCGTGCTTGTAGAAACAACAGATGTCGCGACCCGTGT
CCAGGATCATGTGGTGCTTCTGCAATTTGCCACATTCGATCACACTCACCTATATGTGTA
TGCCCAGCAAACTACGTTGGAGATCCGTTTATTCATTGTCTCCCAGCTATTGAAGCAGAG
CCTTCGACTCAAGCACCTCAATCTTGCACAAACTGTGGACCAAATTCGGACTGTATAAAT
GGGCTCTGTAGCTGTAAATCGGGCTACGTTGGAGCGCCACCCTATTGCCGCCACGAGTGT
CTCAGTTCCAGCGACTGCGAATGGCACCTTATGTGTTTGAATCTGCGTTGTGTAGACCCA
TGCCGCGGAGCCTGTGGACAAGGCGCTCTTTGCGAATCTCTTGCTCATGAGCCTCATTGT
ACTTGTCCTTCCTCCACTACTGGAAATCCGTTCTTCGAATGTCGGCCCATCGTTACAACC
CGTAAGATAAATTAAACAGGAAAATGCGTTTGCTTATTCTACGATGCCACAATAAATTTT
CAAATAAAGATTTATTTTCAAAATATTATTTTCAAATATTTATGGTAAATCAGGTTCTCG
CTCTTAAAGCTTAGGCATGGGTTTTATTGGCGAAACCTGGTGAGCCTATACGATTTCGCG
GTGTTAAGATAATTTGTTTCGCTATTAAAGTGCTTGTTATGCTGAGTTTTAATATTCGCA
GACGTTTGTTTCATAATTTCTTAACAAATTTTC
(5913 bp)

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