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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14194_c2_seq6
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005583 C fibrillar collagen trimer
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006641 P triglyceride metabolic process
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008201 F heparin binding
GO:0016337 P cell-cell adhesion
GO:0030036 P actin cytoskeleton organization
GO:0030198 P extracellular matrix organization
GO:0030199 P collagen fibril organization
GO:0031012 C extracellular matrix
GO:0032963 P collagen metabolic process
GO:0043206 P supramolecular fiber organization
GO:0043506 P regulation of JUN kinase activity
GO:0048251 P elastic fiber assembly
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:13.32 TPM:13.40
ORF EntryO_BomoSK19040_complete:A_BomoSK_comp14194_c2_seq6
Sequence
(Nucleotide)
TAATGAAGAATGTTCTCCACACTTGTCTTGTATTCGCAATAAATGTAAAAATCCCTGTGA
AAACGTATGCGCTGTAAACGCTGAATGTAAAGTTGTGAGCCATTCGCCGGTTTGCGTGTG
CCAATATGGTTTTACTGGGGACCCATTCTTCGAATGTATTCAAGAACCCTTATATACAGA
ACCTATCACATCTCCCTGTTCGCCATCACCTTGTGGAGCTAATGCTATCTGTAAAGAACG
TGACAACGCAGGGTCCTGTTCATGTATCGATGGTTACATGGGTAATCCATATGAAGGATG
TAGACCTGAATGTGTAGTTAATACTGATTGCCCGTCAAACAGAGCCTGTGTTAATTATAA
ATGCAATGATCCGTGTCCAGGAAGTTGTGGTACCAATGCGGAATGTCAGACTGTTAATCA
TGTGCCCTTATGTACTTGTATTAATGGCTATACTGGTGATCCATTTAGATACTGTGTTTA
TCAAGATTCTCCAGTACTAGCTCCGGTTGACGTATGTAACCCTTCGCCGTGTGGACCTAA
CAGCCAATGTAGAACTATTAACGGCCAAGCTGTGTGTTCCTGTTTGATAGAATATGTTGG
ATCTCCACCTAATTGTCGGCCAGAATGCATAGTCAGCTCTGAGTGTTCGCACGACAAAGC
ATGCGTCAACAATAAGTGTGTAAATCCTTGTCCTAAACCATGCGGAGTCAATGCTGACTG
TAAAATGATTAATCACAGTCCAATTTGTTCATGTAAAAATGCTTACACTGGAGATCCATT
TACTGTTTGCACCGCAATAAAACATGAACCTGTACCAGATACGAGCGATCCTTGCGTACC
CTCCCCATGTGGACCATATTCGCAGTGTCGAAACATTGGAAACAATCCGTCATGTTCTTG
TCTTCCAACGTATACAGGCAGTCCACCTAACTGTAGACCAGAATGTATTATACATTCTGA
TTGCCCTGGTGATCGAGCATGTATTGGTTCCAAATGTCTAGATCCTTGTCCAGGATCATG
TGGTATTTCAGCTACCTGTAACGTTCAAAATCACATACCAATTTGTACGTGCATTGAGGG
ATACATAGGTGATCCATTCACCGATTGTAAACCTAAACCCTTAGAAGTTGAACCAAGTGT
GACAGATGCTTGTACAAACATAAGATGCGGTTCCAATGCTGAATGCATTAACGGTCAATG
TCAATGCTTCCCGGAATACCACGGTGATCCTTACTTTAGTTGTCGACCAGAATGTGTGTT
TAGTAGCGACTGTGATGAAACCAAAGCCTGTATACTAAAGAAATGTGTGGATCCTTGCAT
TGGAGCTTGCGGACAGAATGCTATTTGTCAAGTTTTCAATCACATTCCGATGTGTAGTTG
TAATAATGGCTTCACTGGTAATGCGTTTGTCAGGTGCAATGCAGTCAGAGAACCGACTAT
CAAACATCCTTGCAGTACAGCGGTATGTGGTCCAAATAGCCAATGCCGAGAGGTACACGA
TCAAGCAGTTTGTTCTTGTTTACCATCGTATTTGGGCACACCGCCCGCTTGCAGACCCGA
ATGTGTAGTTAACGCTGAATGCCCACAAAATCAAGCTTGTATGAAACAAAAATGTATTAA
CCCATGCGCTGGTACATGCGGTTCGAGAGCATCGTGCGATGTCATCAATCATAACCCCAT
TTGTACTTGTCCTGCTGGTTATTCTGGGGATCCATTTGTAGAATGCAAAGTTTTATACAA
TACACCGCCTGTTGTTATTGACCCATGTCAACCATCACCCTGCGGACCTAATTCTATTTG
TGAAGTCAAAAATAACAATCCATCCTGTACATGCAAAGAAGAATACAATGGACAACCTCC
ATACTGTAAACCAGAATGTATAAGTAACAGCGAATGTGCACCACATCTTGCATGCATCAA
ACAAAAATGTAGAGATCCTTGTATAAAAGCGTGCGGAACAAACGCAGAGTGTCGTGTTGT
CAGCCATTCGGCTATGTGTATTTGCCCACAAGGATATTTAGGTGACCCCTTCATTCAGTG
TTCTGTTAAAATTGAAGATGAAATTCTTCCTCCATGTTCTCCATCACCTTGTGGACCTAA
TGCGATTTGCCGTGAACATCACAACATTGGTGCGTGCATTTGCAATGACGGCTACTTCGG
TAATCCTTATGAAGGATGTCGTCCTGAATGTATTTCTAACTCCGACTGCCCAGGCGACAG
AGCTTGTATCGGTAACAAATGTCAAGATCCATGTCCAGGAACGTGTGGTATTAACTCTGA
ATGCACAACAGTATATCATTCACCAACTTGCACATGTATTCAGGGTTACACTGGAGATGC
TCTCCGTCGCTGCAATCCTATTTTGCCTCAAGAAAATATTCAAGAAAACCTTTGTATTCC
AAATCCATGTGGAGCACATAGTCAGTGTCGAGAAATTAACGGTCAGGCGGTTTGTAGCTG
TTTGTCCAATTATATTGGAGAGCCCCCCTCATGCAAACCTGAATGCATTTTAAATTCAGA
TTGTAACTCAAACAAGGCCTGCGTTAATCATAAATGTATTAATCCTTGTCCGGGACCATG
TGGCGAAAAAGCTGAATGCAAAGTGTTTAATCATAATCCTATCTGCAGCTGTCATTCAGG
TTTCACAGGAGATCCTTTCACGCGATGCTATCCAAAACCAGTAATACAAACCATATACGA
GGAAAGAAACGACCCATGCGTACCTTCGCCTTGTGGTCCACTCTCAATATGTAGAAATGT
CGGTGATCAACCTTCCTGTTCCTGTGCTCCCGGCTACATCGGTAGTCCTCCAAATTGTCG
CCCTGAATGTGTTACAAATCAAGAATGTCAAAGTTCACTGGCTTGCATCAACGAAAAGTG
CAAAGATCCTTGTCCAGGTTCTTGTGGTCAAAATGCGAAATGTTCAGTTATAGAACACGT
ATCTATTTGCACCTGTCTGGAAGGCTATAAGGGTGATCCGTTTACTTCGTGTGCACCGCA
ACCAATACAAGACCTGGTTCCAGCTGATCTTTGTAATCCATCTCCTTGCGGATCAAATGC
CGAATGCAATAACGGGGAATGCTCATGTTTACCCGATTACAGAGGTGATCCCTATCTGGG
ATGTCGACCTGAATGCACGATCAGTTCAGATTGTCAAAAGAATCAAATATGTGCTAAAAA
GAAGTGTTTCAATCCGTGTCCTGACACGTGTGGTCAGAATGCTATTTGTGAAGTCATTAA
TCACGTGCCTATGTGCAGTTGCCCTGCAGGATTTACTGGAAACTCTTTTGTTACTTGCAA
TGCTATTCAAGTACCCATAGCGATTAACCCTTGCAATCCAAGTCCTTGTGGACCGAACAG
CCAGTGCAAAGAAATTAAGAATGTCGCTGTATGCTCTTGTATACCAGGCTTTTCAGGAAA
CCCACCTACTTGCAGGCCTGAGTGTACCACAAGTGCAGAGTGCTCTTTAGATAAAGCTTG
CAATAACTATAAATGCATCAACCCATGTAATGGTGCTTGTGGCATTGGAGCATTTTGTCA
AGTGGTAAATCACAATCCAATATGTTCGTGTCCAAACGAATATACGGGAGATCCATTTAC
TAGATGTGTACTGAAACCTGCAGAAATACAACCGCAAGTTAATCCGTGCTCACCTTCGCC
TTGTGGACCAAACTCAATATGCCAAAATAATAATGATTCTCCCTCATGTTCCTGCCTACC
GGAATATACTGGAGTACCCCCGAATTGCCGTCCGGAATGTACAAGTAATAGTGAATGTGG
AAACCATTTGGCGTGTATCAACAATAAATGTGGAGACCCTTGTGTCGGCGCTTGTGGACA
AAATGCTGAATGCCGAGTAGTCAGCCACACGCCGAACTGTGTCTGCCCGTCAGGCTTTAT
TGGAGATCCATTTATACAATGTTCAATACAACAAATTTTACATGAAAATATCACTCCGTG
TGTCCCGTCGCCTTGTGGAAGCAATGCTTTATGTAAAGAACGTAACAATGCTGGTTCGTG
TGTTTGCTTACCTGGATATTTCGGGAATCCATATGAAGGATGCAGACCCGAATGCATAGT
AAATACTGACTGTCCTTCGAATAGAATTTGTCAACAAAAT
(4120 bp)

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