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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14194_c2_seq5
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005583 C fibrillar collagen trimer
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006641 P triglyceride metabolic process
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008201 F heparin binding
GO:0016337 P cell-cell adhesion
GO:0030036 P actin cytoskeleton organization
GO:0030198 P extracellular matrix organization
GO:0030199 P collagen fibril organization
GO:0031012 C extracellular matrix
GO:0032963 P collagen metabolic process
GO:0043206 P supramolecular fiber organization
GO:0043506 P regulation of JUN kinase activity
GO:0048251 P elastic fiber assembly
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:8.76 TPM:8.81
ORF EntryO_BomoSK19037_complete:A_BomoSK_comp14194_c2_seq5
Sequence
(Nucleotide)
GTGTGGTATTAACTCTGAATGCACAACAGTATATCATTCACCAACTTGCACATGTATTCA
GGGTTACACTGGAGATGCTCTCCGTCGCTGCAATCCTATTTTGCCTCAAGAAAATATTCA
AGAAAACCTTTGTATTCCAAATCCATGTGGAGCACATAGTCAGTGTCGAGAAATTAACGG
TCAGGCGGTTTGTAGCTGTTTGTCCAATTATATTGGAGAGCCCCCCTCATGCAAACCTGA
ATGCATTTTAAATTCAGATTGTAACTCAAACAAGGCCTGCGTTAATCATAAATGTATTAA
TCCTTGTCCGGGACCATGTGGCGAAAAAGCTGAATGCAAAGTGTTTAATCATAATCCTAT
CTGCAGCTGTCATTCAGGTTTCACAGGAGATCCTTTCACGCGATGCTATCCAAAACCAGT
AATACAAACCATATACGAGGAAAGAAACGACCCATGCGTACCTTCGCCTTGTGGTCCACT
CTCAATATGTAGAAATGTCGGTGATCAACCTTCCTGTTCCTGTGCTCCCGGCTACATCGG
TAGTCCTCCAAATTGTCGCCCTGAATGTGTTACAAATCAAGAATGTCAAAGTTCACTGGC
TTGCATCAACGAAAAGTGCAAAGATCCTTGTCCAGGTTCTTGTGGTCAAAATGCGAAATG
TTCAGTTATAGAACACGTATCTATTTGCACCTGTCTGGAAGGCTATAAGGGTGATCCGTT
TACTTCGTGTGCACCGCAACCAATACAAGACCTGGTTCCAGCTGATCTTTGTAATCCATC
TCCTTGCGGATCAAATGCCGAATGCAATAACGGGGAATGCTCATGTTTACCCGATTACAG
AGGTGATCCCTATCTGGGATGTCGACCTGAATGCACGATCAGTTCAGATTGTCAAAAGAA
TCAAATATGTGCTAAAAAGAAGTGTTTCAATCCGTGTCCTGACACGTGTGGTCAGAATGC
TATTTGTGAAGTCATTAATCACGTGCCTATGTGCAGTTGCCCTGCAGGATTTACTGGAAA
CTCTTTTGTTACTTGCAATGCTATTCAAGTACCCATAGCGATTAACCCTTGCAATCCAAG
TCCTTGTGGACCGAACAGCCAGTGCAAAGAAATTAAGAATGTCGCTGTATGCTCTTGTAT
ACCAGGCTTTTCAGGAAACCCACCTACTTGCAGGCCTGAGTGTACCACAAGTGCAGAGTG
CTCTTTAGATAAAGCTTGCAATAACTATAAATGCATCAACCCATGTAATGGTGCTTGTGG
CATTGGAGCATTTTGTCAAGTGGTAAATCACAATCCAATATGTTCGTGTCCAAACGAATA
TACGGGAGATCCATTTACTAGATGTGTACTGAAACCTGCAGAAATACAACCGCAAGTTAA
TCCGTGCTCACCTTCGCCTTGTGGACCAAACTCAATATGCCAAAATAATAATGATTCTCC
CTCATGTTCCTGCCTACCGGAATATACTGGAGTACCCCCGAATTGCCGTCCGGAATGTAC
AAGTAATAGTGAATGTGGAAACCATTTGGCGTGTATCAACAATAAATGTGGAGACCCTTG
TGTCGGCGCTTGTGGACAAAATGCTGAATGCCGAGTAGTCAGCCACACGCCGAACTGTGT
CTGCCCGTCAGGCTTTATTGGAGATCCATTTATACAATGTTCAATACAACAAATTTTACA
TGAAAATATCACTCCGTGTGTCCCGTCGCCTTGTGGAAGCAATGCTTTATGTAAAGAACG
TAACAATGCTGGTTCGTGTGTTTGCTTACCTGGATATTTCGGGAATCCATATGAAGGATG
CAGACCCGAATGCATAGTAAATACTGACTGTCCTTCGAATAGAATTTGTCAACAAAATAA
ATGTCAAGATCCATGTCCAGGAACATGCGCTGCAAATGCTCAGTGCAACACAGTGAACCA
CGCTCCGATATGCACTTGTTTACCTGGCTTCACTGGAAATCCTTTCCAAAGCTGTCTTAT
CATTCAAAACATTGAAATTGAAACGAACCCTTGCTCACCAAATCCGTGCGGACCAAATAG
TATATGTAAAGAAGTAAACGAACAAGCAGTTTGCACATGTTTGGCAGATTATCGCGGCGC
TCCTCCAAATTGTAGGCCAGAATGTGTAGTCAGTGCTGAATGTCCAACAAATAAAGCTTG
TGTCTCCTTGAAATGTCAAGATCCATGCATAGGACAGTGTGGTCTTAACACGAAATGTCA
AGTTATAAATCATAGTCCTATATGTTCATGTATAGAAAGGTTTACAGGTGATCCTTTTAG
CCGATGTTTTGCTTTAGTATCTAGCCCACCTACGCACGAGGAACAACCAAAGAATCCAT
(2339 bp)

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