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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14194_c0_seq4
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005518 F collagen binding
GO:0005882 C intermediate filament
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019215 F intermediate filament binding
GO:0030056 C hemidesmosome
Transcript
Level		FPKM:11.78 TPM:11.85
ORF EntryO_BomoSK18992_complete:A_BomoSK_comp14194_c0_seq4
Sequence
(Nucleotide)
CTGTTTGGTCCACAAGGAGATGTCTGACACGGATTAACTGGTAAATCGAGTTGAGGTTCG
AGTTTGCATGCGGTGAATGGATCTCCAATGTATCCCGTTTTACATGTACAAAGAGGCGAA
TGGTTAACAACTTGGCAATTAGCGTTCGATGCACATGTACCAGGACATGGATCTATACAC
TTATTTCTTGTGCAAGCCTTGTTACTCGGACAGTCCGAACTTACAACACATTCTGGATGA
CAGCCATCATATGGATTTCCGATATATCCTTTTCGGCAAATGCAAGCACCTGCACTAGCC
CGTTCTATACACTCTGCGTTTGCTCCACAGGGCGAAGGTTCACAAGCTGAAAGTGTTTCG
AATGGAACAACAGCATTTTGTGAACACTGAATTGCTGCATCACCGCTATATCCTTCTGGA
CAAATGCAGACCGCTGTATGACTCACAACTCGACACTCAGCGTTTGTACCACATGCTTTT
TCACATGGATTTTGGCATTTTTTATTGATACAGGCTAAATGAGGAGCACATTCACTGTTT
GCGAGACATTCAGGACGACAATTCGGCGGTGCACCAATGTATTCGGGCATACACTGACAA
GAAGGTATTTGGCTGCCGTTTTCTTGACAAATTGAATTAGGACCACACGGTGATGGTTGA
CAAGGATTTATAGGGGCCGTAGGTAACTCGAGAGGCGTAGCAGTACATCGTGTAAATGGA
TCTCCCGTAAAACCTGTAGAACACGTACAAATGGGGTTATGATGTATTACTTGACATTGG
GCTGCAACACCACAAGTTCCCTGGCATGGGTTAATACATTTCTGATTGCTACAGGCTTTG
TCCGATGGGCATTCAGAGCTTGCCACACATTCTGGGCGACAATAAGGCGCAGTTCCGCGA
TATCCCGGTAAACATGTACATATTGCTTGACCATTTAATTCTCGGCATTGACTATTTGCT
CCACACGGGCTTGGTTGACATGGGTTTACAATGGAAAATTCTTTTATAGGGTTGCATTGT
ATAAATGCGTTGCCAGACATCCCTGCCGGACATGTACACACTGCCATGTGATTTATTGCT
TGACAAATGGCATTAGTACCACATGTATTCGGACATGGATCCACGCAATGATTTTTAACA
CAAGCTTTATTCATCGGACATTCTGAACTTATCGTGCACTCTGGACGACATTCAAAGTAC
GGGTCACCTTGGAATTCAGGTAGACAAGAACATATCCCGTCATTGCAAATGGCATTTGGT
CCACAAGGTGATGGATTACAAAGATCAGAAGGAACAGGGTCTTTTTGTGGTTTCAGTATA
CATGCATTAAAGGGATCTCCTGTGTAACCCTCAAGACATGTGCAGATTGAAACGTGATTT
TGAACTCTGCATTCTGCGTAGATTCCACACGACCCAGGGCACGGATCTATGCATCTTTCA
TTGATGCACGATTTATCGCTAGGACAATCGGTGTTGATAGTACATTCTGGTCTACAATTT
GGAGGTTGGCCAATATAAAGAGGTAAACAAGAACATGAAGGCGATCCACCTATATCACGA
CATTGTGCAAATGGACCACACGGAGATGGTAGACATGGATTTGTTGGCAGAGGAATAATC
TCAGCAGCAACAATTTTAGAACAACCATTAAATGGATCGCCGGTGTAATGTACACGACAT
GTGCAAATGGGACTATGATTGATAACTTTGCACTCAGAGTTCTGTCCGCAAACACCTTCA
CAAGGATTTCTGCATTTTTTTTTAATACAAGCTTGTTGTTGCGAGCATTCAGAGCTGACC
ACGCATTCGGGTTTGCATGATGGTGGTGTTCCAATGAAATCTTGTTGACAAGTGCACACA
GCCTGTTCATTATTAATCTTGCATATACTGTTGGGACCACACCGCGAAGGCGTACAAGGA
TTTTTCGTAACCGAAGGAGTATCTGCGCTTTGCTCATAGCAGTTTTGGTATGGATTTCCA
GTTAATCCCGGCAAACACTCACATTTTGGTGAATGATTTATGACATTACATATCGCGTTG
AGGCCACAAGCGCTGTTACATGGATTTTTACATTTGTTTTGAATACATGCTAGATTGGTT
GCACAGTCAGAATTAACTATACATTCTGGACGACAGCCCTCGTATGGATTTCCTAAATAT
TCTGGTAAACATACACAAGCGCCGGCATTTCCTTGCTGCTTACATATTGCATTCGGACCA
CAAGGTGAAGGTTGACATGGCGTCAAAGGTATGTCTTGCACTAAACAAGCTATGAATGGG
TCTCCTGTATAACCAGGGGAACAAATACACTGCGGCGCGTGACTCACAACCTTACATTCT
GCATTAGATCCGCAAGAACCGGGGCATGGATCCTTGCATTTTTGATTCATACATGCCATA
CTATTGGGACATTCTGAATTTGCGATACATTCTGGTCGACAATTTGGTGGATGGCCTAAG
TATGTTTCCAAGCATGCGCAAGATGGCGAGTTACCAACTTCTTTGCAAATTGAGTTCGGT
CCACAAGGTGATGGCTCACAAGGATTTACATATTGAGGTATTTCTTCTTCTTGAACAGAA
CATCTCGAAAATGGATCGCCGGTGAATCGTTGTGGACAAGAGCATATAGGATTGTGGTTA
ATAACTTGACATATGGCCGCTGTACCACAATTTCCTTTGCAAGGATCAATACAACGTTGA
TTAGAACAAGCTTTGTTCAATGCACATTCAGCACTCGATATGCATTCTGGTCTGCAAGTT
GGAGGAGCTCCGAAAAATCCGGGGAAACAGGAGCAAATCGCTTGTCCGTTAACTTCTCGG
CACTGACTATTTGGACCACAAGGCGAAGGACTACATGGGTTTATTTCTTCAATATTCTTT
ATAGGTCGACATTGTAGAAAAGCATTTCCTGTAAATCCATTTGGACACGAGCACATTGGC
AAGTGATTATACACGTTGCAAATTGCGTCTGTGCCACACGTATTAAAGCATGGGTCCACA
CATTTTTTCTTCACACAAGCCTTTTCTTGAGGACAGTCGTTGTTGAGCAAACATTCAGGC
CTGCATCCAAAATACGGGTCACCTTGGTAATCAGGCAAACATGTACAAATTCCATTATTG
CATTCTGCGTTTCCTCCACAGGGCGACGGGTTGCATGGGTCAGGTTCCGAGAATTCGTCT
TGTTCTATTGCAGGTGAGCAACGAGTAAAAGGATCTCCAGTGTGTTGTTCAATGCAACTA
CACTGTGCGACATGATTAAATACAGAGCATTGAGCATTAATTCCACAGGCACCAAGACAC
GGGTCGCGGCACTTTTCATTAATACACGCTTGGTTACTAGAGCATTCAGAGTTTATAGTG
CACTCCGGTCTACAGTTAGGTGGAGTTCCAACATAATTCAATTTACAAGCGCAAGATGGA
GCATGTTCTATATTTCTACATTCTGCGTATGGTCCACATGGCGAAGAGATGCACGGATCT
TGTATTGGTATATTTTGAGGCGGTTTAGAACCTGTTATTGGATAGCATCTTGTGAAAGGA
TTTCCAGTTAATCCTTGCTTGCATACACAAATAGGACTGTGATTAATAACATTACAGCGA
GCGTTTTCTCCACATGCGCCTTCGCAGGGATTAATGCATTTTTGTGAACTGCAAGACAAA
TCCGGTGGGCATTCCGAGCTTACAACACATTCTGGTCGGCAGTTCGGTGGGGAACCACTA
AATGAAGGTAAACAGGAACATACAGCTTGTCCATTTATTTCTTTGCACTGACTGTTGGCA
CCACAGGGCGTAGGGTTACAAGGATTTGTTTCCAATACTTGAGGTTCTTGCATAATAGTA
CAATATCCGAACGGATTTCCGGTATATCCCGGCTGACAAATGCATGTTGGCATATGATTG
TTAACTAGGCATAAAGCATTTGAACCACATACTCCTGGACAAGGATCGACGCACTTCATC
CTCGAACAAGCTTTATTAAGAGGACAATCGGAATTGACGACACATTCTGGTCGACAACCT
TCATAGGGATTGCCCGAATAACCGTCCAAACATTGACATGATCCAACTCCTTTTTGTTCT
CTACAAATAGCGTTAGCGCCACAGGGACTAGGACTGCACGGTGTCAGAATTTCTGTGTAA
TCCATTACTGCTAACATACTACAGTAAGCAAAAGGGTCTCCAGTATATCCTACTTGACAG
ATACAATTTGGGGCATGACTAACTACTCTACATTCTGCGTTAGACCCGCAGGTACCAAGA
CACGGATCAATGCATTTTTTATTTTGACAGGCTAGATGATACTCGCATTCACTGTTACTG
ATACACTCTGGACGACAATTTGGAGGAGTCCCTTTGTAATCTTGTAAACAAGCACAAATT
GGATTCTCTCCACTTATTTTACAAATAGAGTTAGGACCACAAGGTGACGGCTCACACGGG
TTTACCGTTGGTTCTACCGCAACTATGACTGAACATCTAACAAATGGGTCTCCAGTAAAC
GAAGGAGGACAGGTGCATATTGGGTTGTGATTAATTACATCACAAACAGCTCCAGCGCCA
CAAGCTCCAATGCAAGGATTAAGACATTTTTGGTTGTTGCAAGCTTGATTAAGAGGACAT
TCCAGGCTGACTACGCATTCAGGTCTACAAGTAGGCGGACTGCCTTTATATCCAGGTACA
CATGAACATACTGCTTGTCCATTACTTTGCTGACATTGACTATTAGGTCCACAAGGAGAT
GGACTACACGGGCTTGTAGCTGTCACTGCAACAGCTCTACACTCCACAAATGCATTTCCG
ACCATTCCTTTGGGGCAAGAGCACATTGGAATATGGTTCATCACATCACAAATAGCATTC
AATCCATGTATTGGCACCTGCGGAGTGAATGCTATTTGTGATGTGA
(4906 bp)

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