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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14194_c0_seq2
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0001525 P angiogenesis
GO:0001756 P somitogenesis
GO:0001840 P neural plate development
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0009952 P anterior/posterior pattern specification
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021514 P ventral spinal cord interneuron differentiation
GO:0021523 P somatic motor neuron differentiation
GO:0021531 P spinal cord radial glial cell differentiation
GO:0021986 P habenula development
GO:0030154 P cell differentiation
GO:0031016 P pancreas development
GO:0031017 P exocrine pancreas development
GO:0035907 P dorsal aorta development
GO:0042663 P regulation of endodermal cell fate specification
GO:0046872 F metal ion binding
GO:0048259 P regulation of receptor-mediated endocytosis
GO:0048337 P positive regulation of mesodermal cell fate specification
GO:0048699 P generation of neurons
GO:0048936 P peripheral nervous system neuron axonogenesis
GO:0050768 P negative regulation of neurogenesis
GO:0050793 P regulation of developmental process
GO:0055016 P hypochord development
GO:0060271 P cilium assembly
GO:0061314 P Notch signaling involved in heart development
Transcript
Level		FPKM:28.79 TPM:28.96
ORF EntryO_BomoSK18988_internal:A_BomoSK_comp14194_c0_seq2
Sequence
(Nucleotide)
GTTCCACCACTGCGGATGATACTATTATATTACAGCTAAGGAATGGATCTCCTGAGTATC
CATTTTCACACAAGCATATGGGAGTATGGCTTACTACCCTGCATTCAGCGTTTATACCAC
ATGCCCCTGCGCAGGGGTTTTGACATTTTCTGTTAATACAAGCCATATTTTGAGAACATT
CAGTGTTACTTGTACACTCCGGTCGACAATTAGGAGGTGAGCCAATATATTCTAATAAAC
ATTTGCATTCTGCATTTTCACCATTCTCTGTACATTCTGAATTTGGACCACACGGTGAAG
GTAGGCACGGAGTGACCTTCGCAGGCGGTGTGGCAGGGATAATTTGGCATGATGAGAATG
GATCTCCAGAAAATCCAGGCGAACACGTGCATATGGGGTTATGATTGACAACAATGCATT
TTGTATTGCGACCACATGCTCCAGGACACGGGTCTATGCATTTTTGGTTGGAACAGGCTT
CATTTAATTTACAATCAGAGCTCAATATGCACTCCGGGCGACAATTTGGAGGACTTCCGA
GATAGCCACTCACACAAACACACACGGCATGTCCATTCAACTCTCTGCATTGACTGTTTG
GTCCGCAAGGTGACGGTACACAAAGATTGACAGGCGTGGGTAGCTCTAAAATTTGTGTGC
AATAACTGAAAGGCGAACCAGTAAAACCAGATGGACATGAGCACATGGGAATGTGATTAA
TAGTTTCACAAATTGCGTCTGTTCCACAAGTTCCAATACATGGATCTTTGCATTTACTAT
TAATACATGCCTTGTCCCTAGCACAGTCCGAATTTAGGACACATTCTGGCTTACATCCGA
AATACGGATCACCATGATATTCTGGTATACAAGTGCACAGTCCATCTTCGCAAATAGCAT
TTGAACCGCACGGTGAGGGAGAACATAGGTCAACATGTTCTTCTTGTTTCAGGAAACAGC
TACTGAATGGATTTCCTGTATATCCTGGCAAACACGAACATATTGGCAAATGGTTGTTTA
CAATACACTGAGCATTATTTCCACATGCCCCAGGACAGGGGTCCAAGCACATGTTGTTAA
TGCAAGCCGTTGCTGCATTGCATTCGGAGTTTATTGTGCACTCGGGTCTGCACCGGGGAG
GAGAACCTTTGTAATTAGGTACACAAGTACAACGGGCATTTCCATTTACTTCTTGACAAA
TGGAATTAGGTCCACAGGGTGATGGAATACACGGGTTAACTTCAGGATACGTTTCGAGAC
TCGATATGGCAATTGGGACGCAATTAGTGAACGGATCTCCTGTAAATCGATCTTGACAAG
AACAAATCGGATTGTGAGAAATAACTCTACAATTTGCATTTCTACCACATTGTCCTATGC
ATGGATCAACACATTTTCGGTTAATACATGATTTCACAACAGAGCATTCACTGTTGATGG
TGCACTCGGGGCGACAGTTTGGAGGAGTTCCCATAAAATCAGCTTGACAACTACATACGG
CTTGTGAGTTTACTTCGCGACACTCACTGTTGGGACCGCATGGCGATGGGCTACACGGTG
TTGGTTTAACGTCTTCAACTTTAGTAACACAGTATTGATACGCATTACCCGCTAAGCCAG
GTGGACAGTGACATGATGGCAGATGATTAACCACTTGACAAATTGCGTTTGGCGCACACA
CTCCGGGACAAGGATTTTTACATTTGTTTTGAATACAAGCCAACATAGGAGCGCAGTCAC
TATTAATAACACACTCTGGCCTACATCCTTCGTATGGATTTCCCATATAGCCATCAATGC
ATTTACAGGAGCCAGCGTTATCTTTCTGCGTGCATTCTGCGTTTAGACCGCAAGGCGAAG
GCTCACACGGCGTGCTGTATTCAATGAAGGTTTCGCGTATTGGACTGCATGAAATAAGTG
GATCTCCTGTTTGACCATTTGGACAAGAACAAACTAATGCATGACTTATAACTTTGCAGT
CAGCATTATAACCACAGCTACCTGGACACGGATCTTTACATTTCTGATTGATACAAGCCT
GACTACTTGGGCACTCTGAGTTACTGACACACTCTGGACGGCAATTTGGTGGCGTTCCCG
AGAAATCCGGCTGACAGGTGCAAGAAGGTGATTCTGCGATTACTTTACATATAGAATATG
GACCGCAGGGTGATGGCGTGCAAGGATCAACAGGAGGTAATTGCGCTGTCACTATCGGCT
GGCAGTTTGTAAACGGATCACCCGTATACTGTGGTGGACAAGAACATATGGGATTGTGGT
TTACAACTTCACATTTAGCTCCATATCCGCAGCTACCTTGACAGGGATTAATGCATTTAT
GGTTGTTACACGCTTCATTTCTAGGACATTCAGCGCTAATTATGCATTCTGGTCGACAAG
ATGGAGGAGTTCCAATGAATGATGGCAAGCACGAGCATACTGCTTGGTTATTCACAGACC
GACACTGACTGCTTGGTCCGCACGGACTCGGATTGCATGGTTCCTCGTGGACAACTTGTA
TAGTATGGCATTCCACAAAAGCATTGCCCGTTGTACCGTCGGGACAAGTACAAATTGGTA
TGTGGTTATAAACACTGCACTGGGCAGTAGGTGCACATGTTCCGGGACAAGGATTCATAC
ATTTGTTCTTTGAACATACTTTGTTCAGGGGACAATCTGAATTTATCACGCATTCGGGCT
TGCAACCTAAGTAAGGATCACCGAAGTACTCTTCTAAACATGTACAAATTCCATCATTGC
ATTGGGCATTGAATCCGCACGGAGACGGATAGCAAGGATCTTTTGGTATTTCATCTTGAA
TAGGTTTCATCAGGAAACAAGCCGAAAATGGATTTCCGGTATATCCTTGGATACAAGCAC
AGGATGGAACATGATTGAACACTGAGCACTCAGCGTTTTGGCCACAGCTTCCGGGACAGG
GATCTCCACATTTCATATTGAAACAGGCTTTGTCAGAAGGACAGTCTTCATTTATAGCAC
ATTCTGGTCGACAATTTGGTGGAATTCCTAGGAAATTCGGTATGCATGCACAAGACGGCG
AACCGTTTATTTCTCTACAAATAGCGTTATCACCGCAAGGATTTGGCAAACACGGATTCT
TAGTAACTGGTATATCTTCAGGTTGAGGATAACATCTTGTGAATGGGTCTCCGAGAAATC
CTAGTTTACAAGTACAAATAGGACTATGGTTTATGACTTTACATTGGGAATTTATTCCAC
AATGACTTGGACAAGGGTCTGCGCATTTTAAATTGATACATGCTCTATTCTGTGGACATT
CCGAGCTAACTGTACATTCTGGTCTGCAACCAGGCGGTGATCCCACGTATTCAGGCATAC
ATGAACATGCGCTCTGATTATTAACTGTGTGGCAGATACTGTTCGGGCCACATGGATTAG
GCACGCACGGTGTGATCGATATAGCTGTTGGAACTTGCATAATATCACATCTTCTATACG
GATCTCCGGTGTAACCTTCCAGACACGAGCAAGTTGGTAAATGATTTACAACGGCACACG
TTGCTAATGCTCCACATGTTCCTGGACATGGGTCTTGGCATTTGTTGCGAATACAACTCT
TACTAGGTTCACAGTCAGTATTGATGGTACATTCTGGTCTGCAACCTTCATACGGATTGC
CAATATAATCGGGTAAACAAACACACGATCCGGCTGAATTATGTTCTTTGCATAAAGCAT
TAGGTCCGCACGGCGAGGGTTCGCATGGTGACGAATGTTCGTATAAAATTTCTTCAATAA
AGCATCTCGTAAATGGATCACCAGTATAACCGTTATCACAAAAACAGGTCGGCGTATGAC
TTATTGTCCTACACAGAGCATTAAGTCCACATGCGCTGGTACAAGGATCAGCACATTTTT
GATTTATGCAAGCTTTGTTAACGGGACATTCATTGTTACTAGTGCATTCAGGTTTGCAAT
ATGGCGGTGTACCAAAGAAATCTGGCATGCACATGCAAGATGGAGTTCCAGATACTTCTT
TGCAAATTGAATTTTGACCACATGGAGATGGCGTACAAGGCGTCACGTCCGCTGTAGGTA
CTCTAAATGGCACGCATCTTGTAAACGGATCTCCAGTGTATTTATTTGGACAGGTACAAA
TTGGGTTGTGTTTAACTACCATGCATTTTGCTTCTATTCCACAAGATCCATCGCATGGGT
TAATACATTTTTGGTTGCTGCACGCTTTGTCAGAAGGACAGTCTGAACTCACAACACATT
CTGGCCGACATAAAGGAGGACTGCCAATATAACCTTGGATGCAGGTACATACAGCCTGCC
CATTTATTTCACGACATTGACTGTTCGGACCACAAGGTGATGGAAGGCAAGGATTTGTCA
CAACAGGCACTTTTATGAAATCACAAGAGTAGAAAGCATTTCCAGTCATGCCTTGAGGAC
AACTGCACATTGGCGTGTGGTTTATCACGTCACATATGGCATTAGAAGCACATGTGTCTA
CGCATGGATTTATGCATTTATTTTTAACACAAGCTTTATCTCTAGGACAATCAGTACTAA
GAACACATTCAGGTCTGCATCCAATATATGGATCTCCTTGGTGTTCTTCTATGCAACTAC
AAACACCATCAGAACAAATGGCATTTGAACCGCATGGTGAAGGATTGCATTTATCAACAA
TATCTGCTTCTGGTGGTTTTGGCTGGCATATGGTAAAGGCATCTCCAATATAGCCATCAG
GACACACACAAATCGGTGTATGACGAGAAACTGTACATATGGCACCTAATCCGCATGATC
CTTTACAGGGGTCTTTACATTTTTGTTGTATACAAGCTAATGATGTTGGACATTCCGAAT
TTACTATACACTCTGGCCTACAGTTCGGTGGATTTCCTATATAATTATCCATACAAGCGC
AGGAGGGAATGTTTCCTATTTCGTGACATATGGAATTTGGCCCACAGGGTGACGGAACGC
AGGGATTTCTGTATGGTTCTAAATCAGCATTAGCAACTGGAGGGGGTATAGGATTACATC
TTGTGAATGGATCTCCAGTATAATGCATTGTGCATTGGCAGATTGGATTATGATTTATAA
CCCTGCATTCTGCATTGATTCCACAGGCATCCAGGCAGGGGTTACCGCATTTCTGATTAA
TGCAAGCCATGTCTCTAGGACATTCTCCATTAGTTACACATTCGGGGTGACAACCAGGAG
GAGACCCAACGTAATTTGGTAGACAAGAACATACAGCTTGTTTGTTGACTTCTTGACATC
TACTATTCGGCCCGCACGGTGAGGGCTGACATACGTTAATTGGCGTTTCCAAAATTTGTT
CTGGTGTACAGTATCGGAAGGGATCTCCAGTATATCCTCGTTCGCACGAGCAAGATGGGT
TATGGTTCACTACTTGGCATACTGCATTCGGTGCGCATGCACTTGGACAAGGGTCTTGAC
ATTTGTTTTGCAGACAAGCTTTGTTTGAAGGACAATCCGTATTAATTATGCATTCTGGTT
TACAACCTTCATAAGGATTTCCAAAATATTCTTCCAAACACACACATGAACCAGCACCAT
TGAATTCTTTACAAATAGTATTTGCACCACAGGGTGAAGGTTGACATGGAGTTGTTGCTT
CAGATATTATTTGTATGCGGTGACATTCTATGAATGGATTTCCTGTATATTCTAAATCAC
AAGAACAGGTTGGAGAGTGACTTACTACATGACATTGCGTGTTTAATCCGCAAGAACCTG
GGCAAGGGTCTTTACACTTCTGGTTAATGCAAGCCAAGTGTAGTGGGCATTCAGTATTAC
TGATACATTCAGGTTTACAGTAAGGTGGTTTTCCAATATATTCATCAAGACAGGAACATG
ACGGTGCTCCAGAAATTTCTTGGCACATAGAGTTTGGTCCACAAGGTGATGGTGTGCACG
GATCACTATACTCAGGCTTAAACTCTTGCACAAAGCATCTTACAAATGGATTTCCAGTCA
GAGAAGATGGACATGAGCAAATAGGATTATGATTAATAACTTGGCATTGTGCGTTCACTC
CACAAGTTCCTTGGCATGGGTTGATACATTTTTGATTGCTGCAGGCTTCGTTGGGAGAAC
AATCAGTGCTCACTGTACATTCAGGCCTACAAGATGGAGGACTTCCAACAAATCCAATGA
AACAAGCACATATAGCTTGCCCATTAATTTCACGGCATTGACTGTTAGGACCACAAGGAC
TTGGTTGACATGGCTGTGGTTTGACAACTTCCAGGTGTGAGCATAGAACAAATGCGTTTC
CTGTCATACGTTCTGGGCATCTACACATGGCAACATGATTGAAAACTTCGCATATCGCAT
TAGCGGCACAAGCGTTGCTTAAACATGGGTTTGTACATTTATTCTTTTGGCAAGCTTTGT
CTTGGGGACAATCGGAATTCAGAACACATTCAGGCCTGCATTCAAAGAACGGATCTCCTT
GGTATTCAGGAAGGCATGTACACTCTCCGTTATTACAAATGGCATTAGGACCACAGGGTG
ATGGATTACACAAATCTATTTCATCATTAATTTGTTCTTGAAGTTTACATTCAGTAAATG
CATCTCCTTCATAATTGTCAAGACAAGTGCAAATCGGCATGTGCTTCTTGACAAAACATT
GAGCGTTTAAACCACAAGAGCCTGGACAAGGATCTTTGCATCTCTGGTTCATACAAGCCA
AATTACTAGGACAATCAGCATTAATTGTACACTCTGGGCGACAATTTGGAGGGGCCCCAA
TGTAATTAGGCAAACAAATACATGAGGATATACCTCCGATATCTCTGCATTCACTAAATG
GTCCACAAGGCGATGGTAAGCATGGATTCTTTGGTTGTTCCTCGTG
(6886 bp)

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