SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14194_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001525 P angiogenesis
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
GO:0050793 P regulation of developmental process
GO:0060271 P cilium assembly
GO:0061314 P Notch signaling involved in heart development
Transcript
Level		FPKM:1.71 TPM:1.72
ORF EntryO_BomoSK18987_5prime_partial:A_BomoSK_comp14194_c0_seq1
Sequence
(Nucleotide)
CTCCGCCAAAGATTGAATATTTAAATCCTTGTGAACCTTCGCCTTGTGGCGCGAATGCAG
TGTGTAAAATCCAAGGAAATGCCGGTTCGTGCACTTGTTTGCCTGAATATTTTGGTGATC
CATATCAAGGATGTAGACCAGAATGCTTAACAGATTCTGATTGTCCACTGGTATCATCTT
GCAGCAGAAACAAATGCATAAATCCTTGTCTCGGTGCATGTGGTGTTAATACTGAATGTT
TCGTTAACAACCACAAGCCGATGTGCAACTGTAAGAGTGGTTTCACAGGAAATCCAATGA
CTATATGTTCCGCACTAAGAGGTGAGTTTCACACAAAAATTTGAGGAATACTATTTTGTA
TACGTTTCGTGATATCAAATGTGGCAATTTTCAGAAAATGATGTTTACATTGAAAATGTT
TGTAATCCTTCACCGTGCGGTAACAATGCAATTTGTAAAAATATAAACGAACAGCCTGTG
TGTTCCTGTTTGGCGAATTTCATTGGATCTCCGCCAAATTGTCGACCAGAATGTATTGTT
AATTCGGAATGCAAACCTAGTAAAGCTTGTATAAATCAGAGGTGCATCAATCCGTGTCCA
AAACCGTGCGGAAAGAACAGTGAATGTAAGGTAATCAACCACAGTCCCATATGCAGCTGC
CGCCAAGGCTACAGTGGGAACCCATTCACAATGTGCAACCTAGTTCTTCAGACCTTACCA
AGTGTAGTTGAAACGTCCAATCCATGCTCACCGTCGCCATGCGGCCCATACTCTGAATGC
CGTAACAACAATGGATTAGCAAGCTGTTCTTGCTTATCAACCTACATTGGGTCTCCACCG
TTTTGCAAACCAGAATGTGTTGTTAACTCGGATTGTCCGAGTAACTTGGGATGCATTTCA
GAAAAATGTAGAGATCCTTGTGAGGGCTCATGCGGCTTATTTGCGAAATGCTTCGTAAAT
AACCACGTACCGGTTTGTTTATGCCCGGAAGGTTTTACGGGAGATCCATTCAGTCAATGT
GTGGAAAAGCCTGTGAAAGAAATAACTCCAACTCTTCAATTAGACCCATGTCAACCAAGC
CCTTGTGGACCTAATACTGAGTGTAGGAATGGCGTTTGTTCGTGTATAAATGGGTATCAC
GGAGATCCTAATTTAGGTTGCCGACCTGAATGCGTCTATAATGCCGACTGCCCCTCCGAT
AAAGGTTGCCAGAAAAATAAATGTATCAATCCATGTATTGGCACCTGCGGAGTGAATGCT
ATTTGTGATGTGA
(1273 bp)

- SilkBase 1999-2023 -