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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14191_c5_seq3
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_protocadherin-15_[Bombyx_mori]
Ontology
GO:0001750 C photoreceptor outer segment
GO:0001964 P startle response
GO:0002009 P morphogenesis of an epithelium
GO:0005509 F calcium ion binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0007628 P adult walking behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0035058 P non-motile cilium assembly
GO:0035264 P multicellular organism growth
GO:0042491 P inner ear auditory receptor cell differentiation
GO:0048839 P inner ear development
GO:0050910 P detection of mechanical stimulus involved in sensory perception of sound
GO:0050973 P detection of mechanical stimulus involved in equilibrioception
GO:0051017 P actin filament bundle assembly
GO:0060013 P righting reflex
GO:0060088 P auditory receptor cell stereocilium organization
GO:0060122 P inner ear receptor cell stereocilium organization
Transcript
Level		FPKM:1.35 TPM:1.36
ORF EntryO_BomoSK18981_complete:A_BomoSK_comp14191_c5_seq3
Sequence
(Nucleotide)
GTCGACCGAAGCGACACGGGGGACTCGGACAAAGAGTAAAGCGTCGCGTTTGGCTGTCGC
GTTTGTACGTTGTTAAGCGTGGCGATTGAATTATAATAATAATTTTAAATAAAGTTCGTG
GACTTGTTTACGTATTTATTAAATAACATCAACAAAAAAATAATTGTGCTTGTGACTTTA
CCTTTTAATAGCGGTGAACGTGATTTTTGTAATACTTTAAGGCTCGTACTTAGTGATTAA
CAACCAGGATCTGTGAGTGTAGTTGTGGAAGCAGGTGTTGCATTCCAGGGGCGTTAAGGA
CGCAGCCTCCGCTTCAAATAGAAAGATATCGAGATGGCGGCTAGATTATGAGGTCCGCTA
ACAAACGGCATTTAGATGAAGCAAAGCCGACGATCTAAGGAATGCTAATTCATAAGCGTT
ATAAATCTAGCTGAGATGCCGCGGTGGAGTGCGCTGATCCGGCATGGACAAACATCGATA
TGGCTTTTCCTATGCCTGGTTTATCTGGTCATCGCCACTCCCGGTCCATGCGAAGTGGAA
ACGGGTCAATCGAGTATTATAGTCGATATCGAAGAAAGCAGAGGAGATCAAGTTAACCAA
AGCACGGTGCCAGCAATCTTGCCAGTAGTGGGGGAGCCAGATGTGGATGTAGTATTATCG
ACAGTGTTCCCTAAGGGGCCAACGCTGTTTCAGCTCGATGGAAAACGCTTACAACTACTC
CAGCCCCTCGATAGAGACGCGGACAACCTCTCACATATGGTCTTTCAGTTGGTGTGCCAA
GTGAAAGCTACGAAGAAGCGTCGGACCATACCTGTGATAGTGAGAGTGTCGGATATCAAT
GATAATGCGCCCGTGTTTCAGGGGACTCCGTATGAAACTAGCGTCTCTGAGTTGGCTCCG
ATTGGCACGACGATATTCGAAGGGATTCGAGCAGTTGACATCGACGCTGGAGTTAATGGC
TTGTCAGAATACTTCATAATACAGGGAGATAACCAGACATTGGATTCAATGAACGCCGCT
GACGGGTACAGCCATTTCGCCATTCCGATACCTCATGTTGGACACGTCACAGTTAACAAG
AGTTTGGATTACGAACGAACACAGAAGTATCTAGTCACTATTGTTGCTTCTGATCGTGCC
CGTGATAACAAAAGACGGTTGTCAAGTACAACGACGCTAACAGTGAACGTTCAAGATGAT
GATGATCAAGATCCTTCATTCATATACAAAGGCTGCACCCTACACGAAGGAGCTTGTTTC
AACCCCGAATATGCCAGTTACGTGAACAGCGGTATGCTAGCAGGAATCCTCTCATTAGAA
CCGGAAAAGATTCAAGCCGTCGACATGGATACATTGAACGCGAGGATACGTTACAGCATC
GAGAGCGGAGAACCAGAGTCTTGGCCGGATTATTTCACTATCGACACGAACACCGGCGCT
GTAAGGCAACTGGTGCCGGTCGATACAAGTATTGCGAAAAAGTTTCAATTGGTCATTAAG
GCCGAAGAAGTATCAGAAGCGAAACGTTATACCACAGCCAAGTTGACCATCACAGTGCGG
CCGGTAGACGCTAGTCCACCAGTCGTGAAAGCTTCTTCAGATTTAGGGGAAGTCGAGGAA
AACTCACCGAAAGGAACTAAAGTCTTGGACTTAAACGGTCAGCCGATTGAGCTAGCTGTT
TCTGATCCCGATCTGGGACCAGGAGATCCAATTCCGAACTACACGTTTGAACTAACCACT
AATTTCTTCGACATCAAGGACGGATATTTGGTTGTTGGTGACGAGACACTTGACAGAGAT
CCACCGAATCCAGGGAAATATAGAATTCAGGTCGTAGCCCGCGAAGCGAACGGTGGAGCC
GCCTCAGCTCCATATACCATCACCGTACAGTTGCTAGACCAGAACGATAACGCACCAACC
ATACCTAAAACCCAACCAATAGTTGTACCGGCCACTTTAGAACCCACCGCAGTGCATAAG
GTCGAAGCTGTTGACATCGACGAGGGTGAGAACGCACGTGTGACCTATAATTTATATCAC
GTGTCTAATAATGGTGGCAACAAATTCACTATAGACCCTAACACGGGAGTTATATCAAGC
ACGGGGCGTCTCCAAGCCGGCGAACAATACAGCGTTACAGTTCGAGCCACCGACGCTAAG
GGCCTCAGTTCCCAGGGCATTGTGGAGTTATCCGTGGCCCCCGGCCCTAACACGAGCCCG
CCGCAGTTCTCGTCCAGAGACTACTACGCGCCCGTCTCGGAGGGCGCCGCCATTAACTCG
ACCGTCACCACGGTCACTGCAAAAGATCCCGAGAACGAGCCTGTGACATACAGCATATTA
TCTGGAAACGATCTGAGACAGTTCGCAATCGGCTCTAATACTGGCGTCATAACGGTCATT
AGGAGTCTAGACCGAGAAGTTTTGACGAGATATCAATTGGAGGTGAAAGCAGAAGATCCA
GGGAAATTAGTGAGCACTGCGACCGTCAATATTAAAGTTACCGACATAAACGATAATAAT
CCGAAATTTGATGAGGAATTCTATACGTTTCATGTTAAAGAAGGGATGTCCGATGAATTC
GTTGGGTACGTGCACGCGACGGACGCGGACGAAGGCGTCAACGCGATCATAAGCTACAGC
ATCCCGAACAATTTGCCTTTCAACATCGACAACAACACCGGGATGATCAGCACCAAGACC
AAACTCGACTATGAGAAGACGAAGGAATATTCTTTCGTGGTAACAGCGACAGATGGCGCT
ATAGACAAACGTCTGGGAACAGCGTCGGTCGCTGTACAAGTACAAGACATACCCGATGAA
GCGCCAATATTTCCTTTGCCGCTGTATTCGGTTCATGTACCGGAAAACGTGCCCAATTAC
CCAGTCGTTAAAGTTCAGGCAGAAGATCCCGATACATCTCCGGAGATAACGTACACGATA
ATGAAAGGCGATATGGATCTGTTTTCGATCGACCGCAAGTCGGGTCTGGTAAGGACTCTG
CAGGCCTTAGATAGAGAAACATCGGCCCGACACGAACTCATTGTTGGCACCGAAGAGAAC
AGCGAAGAAGGACCGGGCGCGACCACAACTATAGAGATTGTCGTTGATGACAAGAACGAT
AACTCGCCCATATTCACGTCAGTGGTCCGACCGGTCACGGTGGAGGACTCATCGTCTATA
GGGAGTCTCGTGCAGACGGTCGTCGCCAGTGACGCAGACGCGACGTCACCGAACAACAGA
GTCCGGTACAAACTAGTGGGTCGGGGTAAAGCGTCCAAGTACTTCCACGTCGAACCCGAC
ACCGGTGCGTTGAGGGTTCGCGATGATCTGAAGAAGGAAACGGATAGCGAGTATACGGTG
GACGTACAAGCTTACGACCAAGGCGATCCGGTCATGTCATCGGTGACCAGTCTAACGGTG
TACGTGAGCCATTCGGCAACCGTTCCACCTGACGTCGGCTTAGGTTTCGCTGATACAGTG
TATACGGAACACGTTGCCGAGAACTCGCCCAACGGTACCCTAGTTAGAGTGTTGCCATTA
CTCAATAAAAGGGAACATTCCCCAGACACGCCTCTAAAATGCTTACTCACAGAATCTTCG
CAAAAAGGGATATTCTACGTGAAGCTGACAGAAGACCGCGACTGCGCGATATACCTTAAC
ACGAGTTCGCTAGACTACGAGACACTATCGGAGTATTCTCTGGAAGTACAACTGGAGTCC
ATACAGGGTCTGATCAACCCCGACAGTAGTAGAGCGCTCGTCAAAGTTCATGTGACCGAC
GTCAATGACAACCACCCCGTGTTTGTGTTCAACGAACAGTCCACTGTGGCCGCCGCGAAA
GGGAAATACTTCGCTATTGTCAATAAAGAGATGCTTCTGGGCACCAACGTTCTTCAAGTA
AAGGCGAAAGATCGGGACAGCGGCGCTTACGGCAAGTTAGAATACCACAAGAACTCGTGG
ACCGAAGCGGCCGAAGAGTACTTCGGTCTGGACGCGGACACGGGGATCATAAGCAATATA
AAATCGTTCGAGAACGTTCCAAAGGACATTCTGCCGTTCAAGTTCAGCGTGACCGCGAGA
GACAACCCTGATTCGCCACAGGACTATAATATAGCCAGAGCGTCGGTTGTGATAAACTTA
TTACAAAAAGAGAATCAACTGGTATTGGAAATAGCGGATTTGAATCCGGATGCGATGCGC
CGGAGAGCCAGAAGTCTTCTATCGGTCATAGAAGAGAAGAGCGGTTTGGTCGCCGGCCTA
GAAAAGTTAACGTCGAGACATTATCTAGGAGAGAATGGTACATTGGAGAGCGACAGCCGT
GGGACCGACGTTTGGCTCTACCTAATCGAACCTAGTACTGGCGAAATATTGACTAGAGAA
TCTATGCCTGTGCAGAAGGCCATAGAGACTGGGGTCCACAAAGCGGTGGCTGCTCGGCTT
CAGTCTCCAGTCAGTGAAGTTCGAGCTCCTTTATTAGCGGCCGAATTGCCGAAGAAGCCT
CACATAGCAGCCGCGCCGCTCGCCACGGCCCTACCCGCCGCCCTGATAGGCCTGGCCGCC
GTCGTACTGGTCGCCGCACTGGTCGCCACCATCTACATCTGCGCCTCATGGAACAGGTAT
AAGAAACACAAAGAGCAAGCGGTTCAACAGTACGGAACTCTGAGTATGAGCATGCCGCCT
CCTCGTCCTCCGTCTGGCTACGAGTCCAGTGAAGATGACCCCGCACCGAGATATGAAACA
CAGGTACTCAATATGGCGGTCGATGACGCGGATCTGCAATTAGACTTCAGTCCAAACAAT
CACGCGTTCAATATACACAACGTTCAATATTTATCCAAAGATAATGGTGAGAGAAGTCCA
ACGTTATCGGAAACAGCGACGACAGCTCGAGCCTCGAGCGTCAATGAAAACGGGGGTACT
CTGAACAAACTCCACAACAGCCACTACGATCCTATCGCGAACAACGCGTCCATAGCGCGC
AACACACAGACATTGAACCGAAGGATGCCGAACTCGCAAGCGTTGAACAACGCTCTCGGG
ACATTGCCCCGTGCCAACAATAACAATGTCGGTGGTGGATTATTAGCCGCCACATTAGGT
AGGAAGATCAACGGGAATAATCACAAGAAGAAAACTCAACCCATAATGGCGTACGACGAT
ATACCCGGAATGCAGAAAGCCTCTGACAACGACAACGTGACATTTGGCAAAAGAAACTTC
TCTGGGTACCCATACGATCAATCGACTGTCGAAACTACGACAGAGTTATAGTGAGAAATT
TGTGAAACAATAAAATAATGATATCGAACATTGTAAGATGAAATATCCGTCCAATCAGTG
GGTGAAGTGCTGTTTTAATATAAGCGAAATCTTAAAGTATTGCTCTACTATATCCCTTCT
ATTTTGTGATCGTTTTAAATGACTATTCTTATTTTATAAATCTAATTAAATTATCTTCTA
AAAATAAATATACATTGTATAATCTTTTCAGTTATATATGATTTATTTATATTTATCTAT
TTGTACTATAGTTTAGGGGTACAAAAATACAACATTTTTGTGGTAGGGTAACGTTAATTT
CTTTCCGGTTGTTTGTTATTAATTTCGTAAAATATTTTACATAAAAAAAATTGTACATAG
GTTTTGTAATAAGCGAACTGAGCGACTTTATCATAAATGAACTCCCATTTCCATAAAAAT
ATTTTTTTTTTTTATATTCAACCTCTTTTTAATTAGCTCGAGCGATTCTTCGTATAATTT
TCTTCTTTTAATTTATTAATTTACGTATTCAAAAAATGTATATGTTTAACAAAACTTTTG
TAAAAAAAGTTTGTATTTAAATTTATTTACTCTGTTTTATGATTTCGTTTTTAATAAAAC
TCGTAAAATTAGTATAATGATGATGATGATGTGTTCAACGAATATAATAATTATTATACG
ACTGAAAAATGCTTCAAACTTAATATTATTATAATAATTTTTATAACGAATTTCTTAGCG
GTACTTACTTAGCCAAGGCTAGTCTTTTAAATGAGAACAAATTGCGCGTAATGTTTTTTT
TTTTTTTTATAAATATTATCTTGTAAATAATTGTGGCATTAGAAAGTGTATAGATAATGT
TAATATACGAATAGTAACGTGTATAATGTCAGATAAATATTTTTGATGAGGGGAACTTAA
CAGTGCAAAGGAATTGCTTCCGAAAACAATTGGAAGTGATTTTTATTCCTCAAATGGTCA
GATATCACTAGCTGAGAGGTTGAGCGATTTAGTTTACAGATAAAAAAAATTATATCTATT
TTAGACCTACTGAGTGTGAACTAATTGAAAGCGATATATGTTTGTGTTATGTGTAGCAAA
TTAATATTGTTTTGCCCTTAAAAGCGGTTCGTTTACTTGAATATGGTTATGAATAAGGAT
TCCCAAGGAGAATGTTAGTTTGTATTCTTTTTTTTTTTTTTTTTTTAAAAA
(6471 bp)

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