SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14191_c0_seq6
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_alpha-1,6-mannosyl-glycoprotein_2-beta-N-acetylglucosaminyltransferase_isoform_X3_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0008455 F alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
GO:0009312 P oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0030246 F carbohydrate binding
Transcript
Level		FPKM:2.45 TPM:2.47
ORF EntryO_BomoSK18971_complete:A_BomoSK_comp14191_c0_seq6
Sequence
(Nucleotide)
GAATTGTACAGTTGGTGTCATCATTTGTTCCTTTTAAAAACATATTTTATTCGCTGAATT
AGCATCATGTGACTGAATGCTTGACCTAAACAGACGCGCCATTTCACAACAACACGTTCT
AAAGAATTCGCTTCATTGTAAAAAGTAATGTTTAATAAAAAAAATACGTGTAGTGTTTGA
TTTAAATCAATATATTTGCGCTAGTTTTGTTACCGCGACTCTTAATAATTTGTTTAGAAA
AATAAAACAAGACGATATTTTATGTTACAAAATTATTTTAGTGTACGTTTATTGCCGAAT
TAAATTTACGTAACATTAATTAAACTAAACCGGATTCTGGACCTCATAATCGGTAAACGA
AAGCACGGGGTGGGAGAATTGAAAAGATGCCATAATTCAGTACAGCGCCATCTGTTGTCC
GCGGAAACGAAACTAAGATGAGTGCAGCGCCATCTGTCGAGTGAACGAGATGCCACGGCT
CAAGTATGCTTCGGTCGTGCGTGTTGTCGTCATACTCGGGCTCTTCTGTCTGTGGCTGCA
GATCATGCTGTCTGCTTCTGGCGGGGGAATGTATAGGGATGGAGAAGAGCTGATGAATTC
GAACGACACGTCGGAACAAGTGCTAGCCCTGGTCCCCCCCGAGCTGCACAAGTATCTGAC
GGTGCACCCGAAGAACTCAAGTGTCAACTCCACAGAGAGAGCCGTTTCTAAGAATCTCAC
TGAAATTCGCAAAGCGATACAGAGGAGCAACGAAGCGCAATACATTCACAATGAGGACAT
ATACGGGCCGGTACAGAATGACACCATCATTATTGCCATACAGGTACACACAAGACTGAC
GTATCTACGTCATCTGATCGTCTCCCTAGCCCAGGCTCGAGACATCGAGAGGACATTACT
AGTATTCTCCCATGACTATTACAACGAAGAAATCAATAGCTTAGTAAGAAGTATTGACTT
CACCAAGGTAATGCAAATTTTCTACCCATACTCGATACAGACGCACCCGAATGAGTTCCC
GGGCTTAGATCCCAACGACTGTCCTAGGGATGTGAAAATGCAACAGGCGATAAAGTTGAA
ATGCATCAACGCTTTGCATCCCGACCTCCACGGGCACTACAGGGAAGCGAAATACACGCA
GACCAAACATCACTGGTGGTGGAAGGCGAACAGGATATTCAATCAGCTCGAATGTACAAC
TAATCATACAGGAATGGTAGTGTTTCTAGAGGAGGACCATTACGTGGCCGAAGACTTTAT
ATACATGTTGAATCTATTGCGTGCGACCGCGGACCGCAGCTGTCCGCAATGCGAGATAAT
ATCGCTAGGCACATACTTAAAGACCTACCAGTACCACGCCAACGGAGACAAGGTTGACAT
CACTCCTTGGCACTCTAGCATGCACAACATGGGGTTCGGTTTCAATAGGTCCGTTTGGCA
TAACATAATGGAGATACAGGAACAGTTTTGCGCTTACGACGACTACAATTGGGATTATTC
GTTGCTCCACTTGTCTCAGAACAGAAAGAACCAGGAGAAGTTCAAGGTGATCATGTCCAA
GGGGCCGAGGGTCTTTCACATCGGCGAATGCGGTATACATCATAAGAAGTCGAACTGCAA
TGCTTCGTCCGTCATAAGCAAGGTCCAGAAGTTGCTTCAGAACGCGAAGCCGTATTTGTT
CCCGGGCAGCGTGACGGCGACCGTCACCGCGGGGGGCGCCAAACACAATAAGAAGCTGAC
CAAAGGGAACGGCGGCTGGGGAGACATAAGAGATCAAGAACTGTGCACGAACATGACAAG
GATAGGCCGCGAACTAAGAAGATACAATTACTACGCTTGAAATGGTTGTTAATAATAATA
ATAATATAAAAAAATCATTACAACGCCATCTATCCGCGGCCGCGGGTACTACAGTATTCA
TCAGACCTAAGGCTCCGCGCTTGTCTCGGCTTCGTTGAGGCGTCGTCGCGGTAGCAACCT
CGCGGTAGGTCGACATCGCTCAGATGACGTACAGTCTATTATCGAACACCCTGTATCGTG
AATTCGTACTAGTCAACTAAGTCGATTTTAATTTTAATTAATCTCTTACGTCACGATCGG
ATGATTTCAATTGAACTCTTAATTATAGTCCAGGAGCACTAATCCAATATTGTACAGTGT
GCTTAGTGAGAGTTTTCGAACGAAATTTGTATGCAGTTGGATCAGCGCCCCTAGCGGCAA
ACGTACCAACTCCATGCAAAG
(2241 bp)

- SilkBase 1999-2023 -