SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14185_c0_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_protein_split_ends_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007400 P neuroblast fate determination
GO:0007403 P glial cell fate determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035222 P wing disc pattern formation
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0048106 P establishment of thoracic bristle planar orientation
GO:0048749 P compound eye development
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:6.49 TPM:6.53
ORF EntryO_BomoSK18928_complete:A_BomoSK_comp14185_c0_seq1
Sequence
(Nucleotide)
GCGGCGGGGTCGGCGTCTCGCAGCCCTCGGTCTCTAGCGTGCGTGTAAAGGGAGAAGGTG
ATGCGCGATTTTCGTGTTGAGTTGCACGAAAATGCTGTTGATACATTTGGTAATGTTGAT
GAGAGTAGTGTGGGTACATTGATTCGCCCATTCCTATCTGACCCTGAGGACTGATTGAAG
GAACACTTGTAATTGTGACTCTTGAGCCCGCACCGGTGTGATGGTGTGGGTTAACAACGG
CGAGCTGCTTGTGCAGCAGCGGTGGGTCGGGAGGCGGATGGTGCGCGCCGCGCGGCAGAC
TAGCGGTGGCCGTCGGCATGTACGCACGGTGCCCGCTCTCGCTGCTTCTGTGTGTACTGA
TAAGAACTGGCGTGGCGCGGTCGGCAGGACGTAAGGGGGCGGGTGCGGGTGGATCGGGAC
CGCGATGCGGGAGGGCCGGCGACTGCACACGCACCTCGCCCGTGGCCTCCGTGCCGCCAA
TGGGCACCAGCACTGCTGGCACGCGCGCTCCTTGTACTTCACCGCCCCGTTCCGTTTCTT
GTTGGGTTTCAAAGACAATCGCGAGCTTTGCGCTCCTCTCCGATATCATTTTTTTGGGAG
GTTTGGTGATTGGTGTTGGAACCGTTGGATGAACTGTAGCGACATTCGATCCGGACTTTG
GTGCAGCTGCAGAGATCACCGGTAGAGTGGTTGGCGGTACGGTTGTGACGGTGGCGAGCG
CCAATTTCGGCGTAGACACAGAACAGCCGACAGTTGACGGAATTGCAGTGTTTTGTTCCA
AATTTAAAATTTGACGTTGAGCAACCTCGTCTGCAGAGTTAATGCCTTGTGAACGCGGTA
TCTTCGCATCAGATGAATGATCTTCTTTCCTATTATGCTTTTCATCACCACTTTCGATTG
ACGCGTCCGATAAACTTCTGTCCCTCACTCGCTTTGTTCCACGCGGGGATTTCCTGACGT
CCGAATTGCTATTTTTATCTAAATTCACTTTCACGGCGTTTTGCCTCGTTGATCGTTTTT
TACTGTTTTTAGTTTGAATGTTGTCAGTTTTTAAGATGTCATCAATATCATCTGCAGTCC
CTCGTTGAACGTCCTTCTCTTGGAGTCTTCTAGATTTACGCGTATTAAGCGATGGTGATA
TAAAATCTTCAAGTTTTTCTTCTTTGTTTGTTTTTTCCGCACATTTAGATTGATCTTTCT
GAGAAATGCTTAATGTAGACGTGGCTATCATATTACAATGACCGGATAAAGGACTTTTAA
TTGTTAAAATCAATCTAGGTCTACTTTCTACTTTAGCAGGTGCAGTCGCTGACTCATCAC
CTGAATCCTCATGGAAATCATATACATCGCCCGGCATAGAACAAGTACTATTCTTCACTA
AATCCTTTATATTTTTATCAACTTTCCCCCTGCCGCGCCCTCGTTTTGTGGTCACTCCTC
TCATTGGTTTTGTAATATTTCGGTTTTGAACTCGGTCTTGCTTTTTATCTGATCTCTTGC
CTCTGAGGCTCCTCCCTCCTCTTCTGTTGCTTGAAGGGCTCTTATCTACGAGTGATTCGT
GAGAGTTTTCAGATAAGGTCAGCTTATTTGGAGTCTCTGTTGTCATCTTTTGGAATGACG
AATCCGATAGATTTTCTTCTAATTCAGCCTTTCCGTCACATTGAACAGTATTTTCATTTT
TTATCAAAGTATCAACTTTCACTTCATTTTCATTATTTTCTTTGCACAATGAGTCGACCT
TCTTAATTACGGACTCTATGTTGACGTCTTTAGCACTCCAGGAATCAATTTCATCAGGAG
TTTTAATTTCATTGTCATCTTCTATACCAGGCAGTTCTTGGGTTTGAAAAGCATGACTCT
CAATTTTTTCGGATTTCATGTCTTTATTAGTGTTAATATTTTGGAAGCTTGAAATATCTG
ATTTACACTCACGTTCGGTATTGTCTGTTTCCTCGGGTACAAATTGTGTAGGATTAGTTT
CATTACGAGGAGAAAAAACATTATCAACATCTGGCACTATTTTGTCTTTGATAAGTTTTT
GCAGTGAATATTCAACTGTCGGTTTTTCTTCATTCTCTGCACAATTGAGTGTCAAATCCA
CATTTTCGTTGTTCTCGGTCCTCAATTTGTCAGCACTACTTAAGCTTGTCGAAAGAACAG
TAATCGTCTTCCCAACATTAATTTCAAGTTTTTTTTCTGGATCATTCATGACTTTGATTT
CATTAGTGTTATCTTTCAACAATTCTTCAAAATCAGTCCCACATTTGCTTTCAGTAATAC
CAACTACTTCATTGATAGCTTTGGCAAAGCAATCATTTTGTAATAATTCTGATTGTTCTA
TTTTGTTTTCATTACTTTTTTTGTTATCACTTGGTTTAGAAATGTCATCATTATTTTCTA
TTTTTATTTCTGAATGTAAAGACTCTGGCGAAGTTGCCTTTATTAAGATGGGTGAAATCT
TGGTAAAAGTATTTGATGATGATGATGAATCAACTTTAGTTAGAACTGTAGGAGATTTAA
CGGAAGCCATAGACAAGACTGATGGCCCTTTGTTTGCTTCTAGTTGTCTAACGTTACTCA
AAGGCAGAGGTGTCATTAATCTTTGAGAACTCACTGCATGTATGACGTTTGACCCTGGCC
CACGATTCATTGCGCTGGAGTCTTGAATACTACACATCACAGGTTTTACATTACTTTGAA
TAATAGACGCTGTTGAATGACTAACACCCGCAACGTGAATTATGGGCGTGCCCCCAAATG
ATATATGACCGAGTTGTTCCGGACTTGCACTTTGATTTTCTCGTTTTTCGTGTAGTTGAC
TAATTGTATTAATTAAAACTTTGTTGTTTAAATGTAGTGTAGTATTTAAATTTCCCATAT
GCATAGAATTTTGCATTGAAATTAAGCGATTCTGAGCCATTATGGTAGGGTTTGAGTTAT
GTTGTAGATTATTAGGCGATAATATTATTTTTGGACTTTCTTTTATGCTTTCTGTTGCAT
TTTGTTCGAGTTTCTTGCATTCTCCGGGCATAGTTTTAATCGAATTCAACAGTGGGGAAC
TCACTCCTAAGCCTTTGTTATGTTGGATCAAATTGTTTACATTGACCTGCTTATTAATTG
GAGTCAAAACCGGTGTAACGTGTATTGGTGTAGTCTGCCTATTAAAAGGCATATTAGGTC
CAGGAGCTTGTACTAACACAGAATTATGTCTGTTGGGCGACACAATTGCTCGCGGTCCAT
GCTGTATATGCATGGTCTGTATCGGACTTAACGGCGGTTGTTGCATCCTTACTACAGTTA
CCTGTCCAGGTGACCGTTGCTGTAAAGCACACGTAGTAGTTATACCAGCAGAATTCAAAG
TAGGTGTAGTACTTAAAATTGCCATGTTGGCTATCCGTGGAGTAGGTGCATTCTCAGCTT
GTTGACTATTTTTTGTATTTTGCACAAGAGAATCACATGACATTCTCGGTGATATTACTA
TCCCTTGCGGTTTTTGATACAGTATATGAGATTCCGGAATTTTAATGGTAGGAGGCTGTA
TATTTGAAACTTGAGGTCTGATTATTTGATTGATGACTTGATACGGTGCGCCAATTCTAG
CTGGAGTAATAATAGGTCTGAGAGAATTAGTCACTTGTATATTTTGTGATGAAGAAGCTT
TAATTTGCACTATATTAGCTGTAATATGTGTTGGTTTGCTTTCAGTTTTTTCTCTATTAA
TCAAAGGATTGGTTTTTATGTTAATGACCGGCGACTCAATCAATTTATTATTACTTAGGG
CCCAAGATGTGATAACTGGTGTTGCTGTAGATGTCATTACCTGAGTGCAATCCTTTTTAG
GAATTGGTACCTTTAAATCAGATTCACTTATCTTTACAGTTACACTTTTTTTGGGATCAT
TTTTTATTTCGCTAACTGATTCAATTTTGCTAGTTATTGTGGTCTTGGATACTTCGTCCT
GCTTCAACTGCTCGACTGTGACATTCAAAGCTTGACTTGTGGCAATGATATTGACTGGCA
GTCTTTCTATTGCGTCTTGCGTAGAATCTTCAACTTCTTCATTATCTGTATCAATTAGTA
ATAAATCGTTATCAGAAACTGGGGTATCTGGCTTTGATTCTAATTCACTTGCATTCAAAT
TCTGAACTGCTTGTCTCATTTCTTCGGCATCCTCTTCGGGGATGCTTTCGCTGACAATAA
TTTCAGGGCCGATCTCATTTTTTTGTATCGTTACGTTTTCGGTTGCTTCATAACAGTCTG
TGAAAGAATCTTCTTTTCCACCAAAACTTTCACCTAACAAAGCAGCCACAGCGTCTTCGG
TTTCCTCTTGAGATATTATTGCTCTTGGCTTTTCATCAACCTTTTGACAGAGGCGATCAT
TAAGATCAGTACAGATTTCAGACGCCTTTTCTGTTTCGTTTTCTAAATTTGAAATGCTGC
GCACAGCGTCACTTGCGTCAGAATTATAGGTTGTTTGAAAAATATCTTTCTTAGCATCTG
GTGGACTCGATACATTCTGTTCGTGCACTAAAGAAATGTCTTCAACGGTATTCTTAAAGT
TTTCTTCTGTGACCGTTACCTCTGTGTTGACTTCACCGACGCATACCATTTCTTCTAAAT
CTTTAACTTCAGTCTTGTTGTCATCGATATTGGAATTGTTGGATTTAGCCTCTCCGATAT
CTGCTTTTAAAATATTGGGTGGGCTATCAGTTAACAAAGGTAGACTCTGTGATTCTGTCG
GTGAATTATTTTCAAATTTATTACTAGAAACTTCGGTCGGTAATGTCTCCTCTATTGTTT
TAGTTTTTGATGGTAAGTCTGCAGTACCTACTTCAATAACATCAGACTTCTCCAGTTTAT
CGTTTTTAGTTTCATGAGAAAGGAACACATCTCTACGACTTGTTCGTTCATCCTTGTATC
GTTTTTTTTTCTTTTTCTTGTCCCTGTAATCTCTTTTATTTTTTTCATGTCTTTCTGATA
TATCTTTATAGGGGGAGGTCGTTTCATCAACACTATCATTATGAATTCCATGATACTTCT
CAGGCTTTGCACGATTCTCTTCGTCTGCTGTAGAATCCGCAAACAGCCGAGCCTCTATAG
CTTTGCTAACTGCATCAACATCTAAGCTATTTTCGTCTTCCTTTACTATGTGTTTTTCCC
TGTTACGCTTTTTATCTCTTCGGCGTTTTATTTCATCTTTTTCGCTATTTTTCAAGTCAA
TATTTATAAACGTAGTATCATTTTCCTCAGTCTTACCAAAAGTCGAACACTCTTGGGCAG
TGAAATCAGTTTTACTAACTTGGTGTACATTTATTTCTTTATCTGATTCATCTGTTAGAG
GACCAAATATATCCTCCATTTTACCCTCTTTTTTTAAATTTATTGTTTCTACACCACCTT
CGAAGGAATTGCAATTAGATGATAAGATTTTCTTTTCCTTCTTTGTTTTTTGTTTATCGT
CGTGAAATTCGTCAATATCAATACTTTCTCGTGTTTTTTCTCTTCGTTTCTCTTTCTTAG
TACTATGTCGGCGGATTTTATCGTTATATCTTGCTGAAACTTCTCTTTCATTTATTACAG
AATCATTCTTATCGTTCTTTGGTTCACCGTCAGAGTGTTCGATTTTGTGTTTTCTTTGCT
TTTTCTTATGTTTTCTTCGGATTTCGGTGAAATTTCTGTTTGGAAGTCGATCTATTGATT
CATTTTCGGAAGAGAAGTCAATACAAAGCGATTTCATAACAGAGGATTTAAAATTGCTAT
CACCTTCAGAAACATTTTTAATCTTACTGTCATCGCTATCGCTTTTTCCAAAAAGATTTA
ATAATGTGTTCTTTTTTTCCTTATCAAACTGATCATGTACGTCAAAATCATTTCTGTAAG
TTGACAGAGAATCAGAGTCTGAAACAAATTCCTTTTTAACATTGTTACGAAAAATAGGAC
TTTTACTAATACTCCTGTTAGATTTATCATCATCAGAGGAATCAGATATGATGCGAGTTC
TAGAGTTTTTACGAGACAATTTATTCGATAAATGTGATTCACAGATTGAATCACCCGAAA
AATCTTCGGTTTTCTGTATGTCATTAATAAAGTCTGAAAGGTCAAGTTTAGTATGTTTTT
TACTAAATGTTGAATCATCATCAGTTGAATTATCAATTGAGGATTTGTGATGTCTCTTTC
TTTCCAGGTCTGAGTCACTATCTTCATCCCAACTTGACCTTTTCTTTTCTTCTCTTTTGG
CTCTACTTTGTTTTAGCTGGCTAAATTTAGCTTTAATCTTCTCTTGACGTTTTTCTTCCT
CTTGCTTTTGCATATTTTTACATGAACGCGCTTTAACCTTATCATACATAGAGATATACG
TTGGGCCATCATCGACTATGTCAAAAATAGAATGTTTTTTAGGTTCATCATCAGAATCAG
AACTATCACTGGTTTGCAAATTTTTGCGATTTTTGCGCCTGTTATCATATTTTTCTTCCC
TGCTCTTACGATCAATCGACATTCGCTTCTCACGCATGTCTTTCTTTTTATCCTCAGATT
TTAATTTTTTATCATCTTTTAATTTAATCATTAATTCACAATGTTGTAGAGCATCTTGTT
GCATTTGTAATTCTTGAATTTGTTGCAATTGTTGTAATCGCTTTTTTTCTTTCATTTCCC
TTCTTAAAGCTTTCTGTTTTTCGTCCTCTTCGCTCGATCTCAATTGTAATGTAGCGAGAA
AGTCTAAGTCATTTTGTAGGCCATCTGGTTTATGATTGTCTGAACATTTATCATTTTCAT
CCTTTGGGCTTTTCTTGTATGGTTTCAAACGATCGCTTTTATTACTTTTAGTCTCATTTT
CTTTATGATCGCTACCGTAGTCATCAATAAGCTTAACTTGATTTCTTTTTTCATCTTTTG
TTTTACCCTCGATAATTTTAGCATAATGACCCTTACTAAATTTGGTCGTTTTGTGTTTAT
CGCCTTTTGTGTCTTTTGAATCTCTTCGTTCGGGATGTTTCAAGTCGTTTCTTATTTTCT
TTATATCGTCATGTAAAGAATCCAAACTATCTTGTGATGACATTCTTCTTTTGTTTCCAA
TATTAGACGGCAAACTCGAACACGAATTCAGACGTTCCTTTTTTTTCGTGTCAAGACTTG
GTGAGTCCACTGAATAATGTCTCTGTTTATCATTATATTCAGTCTTGCATTTTGGAATAT
CAACACTATGATCTGATTTAGTTTTGCTTTGATGGTCAGAAGAATGCCTGTGATGATCCT
TTTCTTCAGTTTTCACTTTGACAGGAACATCATGTTTATTTTCACATGGTTTGAGTGATG
AATCTTTGTCTTGTTCATGTTTGGTAGTGTTATGATCGTTATTTTTTGACTTTGATTTGG
ACTCCTCCTTTATATCGTTGATTTCTGCATCCTTGTGTTTAGATGACTCATGCGACGCTC
TAGAAGTTGAAGAATCAGTAGAATCTTTTCGACTGATTTCTCGAGTTGTTTCATCTCGTG
AAGACTTCCGGCTTTTGCTTTCAGAATCCTTCTTGAAATCACGTTTCGAATCATCTTTTT
TAGATTTATCATGTCTGTGTCTATCATCCCGTTTGATTTTAAATAAACATTCGTCCGTTG
AATCCTTTCTTCTTTCTTTTTCGGATTTCTCTCGCTTCTGGTGATCATGCTTAGATTTTT
CTTCAGACGGCTTTAAGTGTTTTTCTGCTGTGGCGTCTTCTTTTTTTTCTTTCTGTTTTT
CATGATCTTTCTCAACTTTTCTTTCTAATTTATCGGAACTCGTTTTATCTAGGAGTCCAT
CTTTGGACTTTTTATCTTTATCATGTTTTTCCTGTCTATGATTTTTGGACTTCTCATGCT
CAGACTTATCTTTTTCTAAACGCTCTCTAGGGGTTTTTGTTTTGTCTCGTTCACTTTTTC
CACGATCATCAAAACTTTTTTCATAAGCAACTTTCTTTTCACAATATGTTTGCGGTTTTG
AATTAGAAATACACTTCTCTTTTTCTATTGATTTTTCTTGAAGGACATTTTTCTCTTTAC
TTGTTCTATCAAAGAGTATTTTACTAAAACCATCACATTGGCTTAATTTTTTTTGTAACT
CATCAGTGATCTCTTTGCTTGTGTGGTTAGGAATCAATATTTCGGTATTCTTTTCACTAT
CATTTGTGGATTGACAAGTGATATTATTATCTTTACTGTTGAATTTTACTATGGATCGAT
CTTCAGCTCTTTGATAATTAGATTTAAATAATTTTTCTGAACTAGTTTCCAAAAATTTTA
GTATCTGTGATTCTTGATGTTGTTCTATCTGTTTAAGTATCATATCCATTACATCTCTGG
CTGTATTGTCTTCTGAAAATGTTGATGGCGGAGGATCATCAGGCAATTTTATATCAGAAA
TATCTACATTCGCACACAAAGAAAATGATTCTTTTTCAATGGAATCTTTTCTCTTGGCAG
TTTTATCGTGGTCAAAATAATCTAATCTCGTTTTGCACTCTAAACCGATTCCAGAAATAG
CTTTATCTGCAATGAATAATTCTGAGCTTTTATTGTCATCACTGCGCCCAGGTGTGCTAA
AAGATAATCTTTTATCCAAACACATGGATGTTTCTTCAGGTGGAATATGTTCAATTAAAT
CCAGAGGTAATTTATCAATGGGAGGTGTCATCGGTCGATGACGCATATCTATTTTGTATT
CATTTTCGTTTATTTTATTCAATCGTTCCGGGCGGACGAGTCTGTCAGATGACCGAGCGA
GACGAGGATCAATCGGACGCTCACCGTCTATTTCAACTTCCGTTGGGGAAGGAAGAGATG
GCAGAGGAATGTGAGAAGTTACAGAAAGATGAGGCGGATTAGTCGAATGTAAACCATGAG
TCGGAAAAGGATAACGAAGAGTTCGCGGGGTGACACATTGAGGGCGCGCACGCGGACTTT
CCATAGGACTAGGAGCACGCACTACACTCTCTAAGCGTTCAGTGTCTTCATCGAAAACAG
ACCGTTTCGCCAGTAAAGAACGAACTACTTCTGAAGGCTTCACTTCATTGATATCGACTT
CGAGGAGACGATGACGAAATCGAGCACGATCAGGAGCGTCAGCTAGGGCCCTGGAGCCGC
TCCATTTCTCGTATTTCTCATCGAGGCTACGAATGCGTTCTTCCAGCGAAGGCGAGTGCG
GCGCGGAGGGGCCACTCGAGGAAGAGGCGGACGGCGGGCGCGGCGGCGAGTCGGGAGCTG
GGGCAG
(9246 bp)

- SilkBase 1999-2023 -