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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14175_c0_seq3
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:6.05 TPM:6.08
ORF EntryO_BomoSK18823_complete:A_BomoSK_comp14175_c0_seq3
Sequence
(Nucleotide)
CCACACCCCCACGGAGAAAGATACGCCAGTTGAGAGCCCTTAATCAAAATTGTCACTATA
CTCTTAATATTACGCATAATTAGGTATACGTGCGAATGTATTACAAGAATAATTGTATAA
AACGAAGAATTATAAGTGAAAATTACAGGTAACAAGTAACAAGTACAAGGTAAAGATAGG
TAACAACAGGTAACAAGATACAAGTAGTTCTTATAAATCAGTAATTTTTTTAAATCTGAC
ACGTCTGCCTGAGCGTGTGGTATAAGGCTCTTTTGTTTTCTCACCTTGAATTTTTATTGG
AATTGACAGCGGCCTTGTTCGCAGCGGCAACAGCGGCGGATTTTCCAGATCCATTGGTCG
TAAGGCTTGATTTTGCTGACAAGACAAAGGCTCGGCTTGCTTCCGTTCATCATCAATGTG
ATCTATGAAAGCCGGCTTAAGTCTGTCTACACTCACGACAACTTTGTTATTTTTTATGGA
CAGTGTGAACGTTTTCCCATCAGGGGAGCGTTCTAATACTCTATATGGACCTGTATATGG
CGGCTGCAATGCCCTGCGGATGGTATCGTCTCTCAGGAAAACATGAGAAGCGCTTTCCAA
TTCCTTGAATATAAATGGAGAGTTTTTACAATGTCGAGAAGCAGGCACTGGGCGTATAGA
TGACATTTTGTTACGCAATTGTACCACAAAGTCGGTGGCATCCTCAATTTTTTCTATTGA
CGAGGAAGCTATTAACAGCTCTCCAGGGAGTCTTAAAGGTTCACCGTACACCGTTTCTGC
GACTGTGGCTTCCAAATCTTCTTTAAAGGCTGACCGCATTCCCAGCAAAACCATGGGAAG
GGATCTTACCCATGAATCTTGATGGCATATTAATGCCGCCTTGAGCTGTCTATGGACACG
TTCAATCATTCCGTTTGCGCAGGGATGATATGAGGTAGTCCTTATACGCTTGGTGGCGAA
TCGAAGCAGCAGCCGGTTAAACAAATCGGATTCAAATTGGGATCCTTGGTCTGTAGTAAT
TATTGACGGTACTCCAAAACGGGAAATCCACTCCCTGGTAAAAGTTTCCACCACTTCCTC
TGCCGTGATGGTACGCATAGGCCACACCTCTGGCCACCTGGAAACCCTATCAATTGCCGT
CAAACAATATCGGTATTCGTTGCAAACCGGTAATGGCCCTACAATGTCTATATGCACGTG
CATGAAGCGACCGGATGGTGTGTTAAAGTTTCCAGTAGGAGCTGAGTTGTGTCTTGAAAC
TTTGCTACGTTGACATGCGTCACAGCTTCGAGACCAAATACGGCAGTCCCTTTTCATCGA
TGGCCAAACGAAACGTTCTGACACGAGGCGTGTGGTAGCACGGATACCAGGATGACTCAA
GTTGTGCAGTTGGTTGAACGCGGTTCTTCGAAAGGAAGGGGTCAAATACGGACGTGGCTT
ACCTGTAGAAACGTCACAATAAATTGCCGATTTCGCTTCTGGAGGGCTGATTTTAGTTAG
GCTCAGGCTAGAGCCATTTTGTAACAGATTTTTCAATTCAGAATCTGTAGCCTGAGACTT
CGCGAGTGCATCGTGATCTTGATCCAGCGCGATGGCGTTGATATCGATGCGTGACATTGT
GTCAGCAACGATATTGTCCTCGCCCTTAATATACTGTATGTCAGTCGTGAATTGGCTTAT
AAAAAACAACTGGTTTAACTGAGGAGGTGGCAGCTTCTCGCGTCTCTGTAAGAAAGCATA
TAAGAGTGGTTTGTGGTCGGTAAAAATTGTGGCATGCTGGACTTCTAAAATATATCGAAA
ATGTTGAACACTTTCGTATACCGCTAATAATTCTCTGTAGTAAGTCGGCCACTGTCTTTG
CTGGGGTGTGAGTTTCTTACTAAAAAAAGATAGTGGAAACCACTTACCATTTACCTTTTG
CTGAAGGCAAGACCCAATATGAACACTGGAGGCATCCGTGAACAGACCTAAACTAGAATT
ACTCACAGGATGTTGTAATAGCGTCGCCGAGGACAAGCTTTGCTTGCAGGCTTCAAATTG
CTGAAGTAGCTCTGGGGACCAAGGAAATGGCCTGGCACCCTTGCTCTTTGTTGCTACGAG
AGCCTCAATTAGCGGTGCCTGAAACTGAGCAGCATGTGGAACAAAACGCCGGTAGTAGTT
CAGCATACCGAGAAATCGGCGCATACCTTGTACCGTCTCAGGAGGTGGAAAGTCCAATAA
GACTTGGATGCGAGCCTGAGGAGGGCGTGTCCCTTCACTGTTTATGTGATAGCCCAAGAA
GTTAACTTCATCTACTCCCAGAGTACATTTGGAGGGGTTAATTACAACTCCGTATTCTTG
TAGACGTTCGAAGAGGGTTCGAAGGTGTTTCAGATGAAGATTCTCATCAGCTGAATGAAC
GAGGATGTCATCAACGTAGGGAAAACAGAAATCAAGACCCCGTGTGACCTCATCAATAAA
TCGCTGGAATGTCTGTCCCGCGTTTCGAAGCCCAAAAGTCATGAATGGGAATTCGAAGAG
GCCAAACGGTGTAACAATTGCTGTCTTCGGCACGTCCTCCTCAGCGATCGGTATCTGGTG
ATAAGCTTTTACTAAATCGATGGTGCTGAAAACTTTTGAACCAGAGAGGTTATGAGCAAA
ATCGTGAATATGGCGCACGGGGTACCTATCTGGAACTGTTCTGGCGTTTAGGGCCCGGTA
ATCGCCGCATGGACGCCAGGTGTCGTCTTTTTTAATTGTCATATGCAGTGGTGATGACCA
GGCACTTTTGGATGGTCGAGCTGTACCAGATTGCACCATATCCTCGAACTCTTTCTTAGC
TGCAACTAGTTTCTGAGGGGCTAAGCGGCGGGGACGGCAGGCAATCGGAGGCCCATCCGT
TGTTTTGATGAAATGGACCGTATGGTGCTTAACGACTCGAGGCAGCCCTGGTGGTCGTGT
AATGTCTGGAAATTCTGCTAATAATTCAGTAAAAATGACCTTTCCAGATGCAACTGCTCG
AACACTTGGTTGATCAATATCAGTGGTTGAGGCAATTGATGATAGTCCTGTGGTCCCATC
AACTATCCTTTCATTTCTGCAATCCGGTAAAAGATTGTAAAACGCTAAAAAATCAGATCC
GATAATTGCAGAGTTAACGTCGGCTATGACAAATTTCCAGACAAAGTTACGGCGTAGCCC
GAAGTTTAGATTTAAATTAATTGTGCCGAAAGTCCGAATGCAACTACCATTGGCAGCGCT
TAAGTCGTATTTGGTAGCCTTTCGCTTTACTGGTAACCAGTGATGGGGGAAACAACATAA
GTCTGATCCAGTGTCGATTAAAAAACGGTGCTTGGTCACTTGGTCAATGACAAACAGGCG
GCGGCCAATACTATCACGTCGGGGTCACCATTTTAGGAAATATGTTGTCAACTGTCGTCG
TTGCGGATTAAACTCAAACTGCAGTATAAGAAGCACTTATTTATTCCACACGCACCTTAA
AATCGTATACATTAACAATCAATTGGTTTTTATCCTTTGAACCTTTTAAAAACGTAAAAC
ACAAATTTTTATCTCATGACATTTTTCCCTCAATCTGACAGCCTGTCTTTCTTTTCTTCC
GGACGTCTCCCGTTGCTAATCTGTGTGTGAAAAACCATTCACCACAGGTGGATCTAACCC
GCCCTACGGGGTTTCCTACTTGGGGATCGTTACAACGAAATTTGTTTAGCGCCTGGCGTG
TCTGGTTTCTTTTTTTCAGATCGTAAACATAATATTTGTAGTCAGTCAGTCAATTCTTAA
ACAGACTGGAATTTGAACACTTATCGAATATGTGGTTCGATGTGTATAACATAATTTTTC
TCAAAGGCGTACGTAACGCGGACTCACAAACTTTTTAATTGGAGCTTTGACGATCAATGA
ACTTTATTTAGGTACCGGCGTAGTGTTCTTGCACAGAAAGCCAGTATTATATTTTGATTG
AGATATTCACTAACGCTTCCATTGAGTAGTCTTACTGGATCCGCTCAAGTCAAGTGAGTA
GTCAGGTCGTCCTCCAACCTTGTCTAATAAAAAAAAACCTAGAGAAAAGGTGGGAAAAGT
TGCGTATCGACATGTACTAGTACCCCTATTAAGTAGACCTCATGTACACCCGCCACGCCA
TGGCTCGTCGCTTTCAAAATTTGCGGTAAAGACTTGTTGCATAAGTGGACCCGGTCTGTC
TAACTATATTGATCAAATTAATATAAAAATCTCGGTTTAACGCATACGTTAAACCCAATT
TTTAAACGCATATAAAATTAGAGTACATAGTATGAAGAATATTAAAAAATATGTAATAAA
AATATTTTATTTTTTTCAAACATTGGGCCTACACTATTTTTTGGGTCGTCTTTTACAAAG
AGAACAAAGTCTCATAGTATTTAAATGTCAAGCTTTGATCGAAGTAATTACCTGATTATT
TATTTTAATAGTCCAATAATTCGTTGTCGATATAGATTGTCGTAGCTATGGTGTCGTGTA
ATAAAAGTGTCGTTATAGAACAAACATCACGGAATATCACAATGAAAGAGTTATTGTTTA
AATGGTGCAATGAAACACACAGAGAATTTATATTGTTG
(4598 bp)

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