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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14166_c0_seq2
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		aubergine_protein_[Bombyx_mori]
Ontology
GO:0000335 P negative regulation of transposition, DNA-mediated
GO:0000785 C chromatin
GO:0000791 C euchromatin
GO:0001709 P cell fate determination
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005700 C polytene chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006342 P heterochromatin assembly
GO:0007275 P multicellular organism development
GO:0007279 P pole cell formation
GO:0010369 C chromocenter
GO:0010529 P negative regulation of transposition
GO:0016246 P RNA interference
GO:0016441 P posttranscriptional gene silencing
GO:0030718 P germ-line stem cell population maintenance
GO:0031047 P gene silencing by RNA
GO:0031933 C obsolete telomeric heterochromatin
GO:0042078 P germ-line stem cell division
GO:0048132 P female germ-line stem cell asymmetric division
GO:0048133 P male germ-line stem cell asymmetric division
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0070725 C Yb body
GO:0070868 P obsolete heterochromatin organization involved in chromatin silencing
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
Transcript
Level		FPKM:0.38 TPM:0.39
ORF EntryO_BomoSK18740_complete:A_BomoSK_comp14166_c0_seq2
Sequence
(Nucleotide)
CTTTTTTATGGCTTCATACCTATTTTTAAAAATATATGAATAAGCGTCTAATGAGAACTT
TAAACGATTATATTGATGCTGATCTTCTCAAATCAACTAACCTATCAGCATAATTCCTAG
CCAGAACGCACAGTATCAGGGCAGGATTTTTCCTTGCAATCACTTCTTCACACATATTAG
CGTATTCTATCGGACCGTCATGACGAATCACAACTAAGTCAGGGCTTCTCATTCGAAAAC
CAACACCTCCGCCAGTTTTTATTATGAGATCAATGAACGACTCTGTATCACGGCGTTGTC
TTTCTGGGGTGATCACTACCCAAGAGTTTAGTTGGGCAATAGCCAGGAGATGCTTCGATC
TCATATCTCGCGTCCAGCCCTCGGTGGTGTCTCCTGCAGGGTATTTAACATTATTTGCTT
GTATTATATTTTCAGGTGGAAGTTGGCGACCCTTTATTTTTACCAGTTCCTTAGATAGTT
TCAACGACCATGTTGCCAGTTCTTCAACAACTTCAGGTGTGCTTGTGAATCTCCTGTTGA
AATTATTAAGCTTTTCAATGCGCTTGTCGGGCCCAATCTTTGTATGGACGTCCAATGAGC
GCATCAGCTTGAAATTAGCTCGCATCTCGTCGGAGAGGCCGGTCTGACGGCACAGTTCTG
GCACTAGATATATCAACTCAGGCAGACCCGCACGAATCTCACGCGGCTTCGACCGCGAAA
TCAGAAGCGGTTGACCCGGATCTTGAATGCGTAGATTGTATTTCTTATAATAGTATTCAA
TATAGGTAATGTTTTCGTCACGCATTTTAAATGTGGACTTCGGCGACACATTCCAAGCTA
CATCGTCAACTCTGTAAGTTCTTTTATTGTAGTCAGTCATTACAATTTTTCCAACAACAT
CTTCTAAAAATATTTTTTTGTAATTATTGCCTTTTGTTGCGGCATATTCACTCAACATTT
GAAGAACAGTGTCCATGCGAAGCACCTTATGGGCGATTTCAGTGACCAACAACAAACGAT
CTTCATATTGATTGATTGTCGTTTTATATCCTGGCCAAATTTGAAGCTTGAATTCTGGTA
TATCAATCTTTGCTTCAGGGTCAAAATAATCCCGTCCCATAAGCTGTAGCTTCAATAAAT
TAAAGCATTTCCTTATAATGATGTTAAAGATTTGTATATAGTGATAGTCTCCAGGGCTAA
CTTCGCAGGTCAGCTTAATTAAGATTCGCATACGTTCGTTATCCGTTTTACGATCAGAAT
ATAGCTCCATCGGATCAGGATGCAGACGATTTACAGTGTACAACACAGTGCCATCAAAGA
GATATCCTCCGAGTGTTTTGCTGTGAACACGCATCAGTGCCTTTCGGACTCCAGTGCTGT
CTTCTTCTGGAGAAATATCGACGTGATATTGATACAGGCCCCATTTGGGAGTTGTTTCAA
CAGTAAAATAGTTGGCAAGCAGATCCAGGGGAGTACCCGAAGTACCTTTCTTAGATGTTA
CAGCTTCTGGACGTGTGCGCAAGATGGAAATAGTTTCAGGAAGGACTCTTCCACCCCCTC
GTCGAGAGCCACGGCCAACTACGGATGATGCATCACCACCTCCAGATGAATGGGGTCCCA
GTTCTAATTTTTGCATGCGTTGTTGCACATCGATATCTCCTGGATGTTCATGTGTAGTGG
GAGTAACACGGTGTGAGGCGCGACCCGCTTGTGCTGTTGGTGTCGGGACACCAGCTCTTA
CTGGAGGAACACTGGATTGTGGTCCCCAGCCAGATGGAGGTTGAGGTCTAGGACCAGGTG
GCATAGATTGTTGTGATGGGCCTGCTTGTTCCCCTGGACGTCGTGGTGCTGGTCCGCCTC
CATCACCACCACGACCAGCGCGTCCTCGAGCTCGTCCTCTACCTCTCGGTTCTGACATCC
TAAGTTGGTCTCTCTAACAATTTTAATTTTCTCTGCGTTTCGTATAGATATTCAGGGCTT
GTTTTTAACTAAATGTACCACGACCATAAAGATGGCG
(2017 bp)

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