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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14156_c0_seq2
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_nucleosome-remodeling_factor_subunit_NURF301_[Amyelois_transitella]
Ontology
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016589 C NURF complex
GO:0016922 F nuclear receptor binding
GO:0019233 P sensory perception of pain
GO:0030097 P hemopoiesis
GO:0035064 F methylated histone binding
GO:0035073 P pupariation
GO:0035076 P ecdysone receptor-mediated signaling pathway
GO:0042766 P nucleosome mobilization
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045824 P negative regulation of innate immune response
GO:0046331 P lateral inhibition
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0046872 F metal ion binding
GO:0048515 P spermatid differentiation
GO:0048813 P dendrite morphogenesis
GO:0070577 F lysine-acetylated histone binding
GO:0070615 F ATP-dependent chromatin remodeler activity
Transcript
Level		FPKM:3.19 TPM:3.20
ORF EntryO_BomoSK18667_complete:A_BomoSK_comp14156_c0_seq2
Sequence
(Nucleotide)
AATTTACCATCTGCCATTTGTATCAGTTGTTGTCCCGGAAGCAATCCTTTTACGGTAATT
TTACCATCTGGAGCCCGAATAATTTGAACTTTTTGTGGTCCATCTTTAGGTGGTGGTGTG
GCTGATTTATTTCCATCCAGTCCTGCTTTACTCGAAATGGATTGACTAATAACTCGTGTA
GAACCATCAGCTCCTTTTGTCATAATTATTCTTCTAGTGCCTATAACGGTTTTTTGTCCA
GTAGGTGTTGTAGCATTTGTTGACAATAAAGAAGTAAGAGTACTTTTTCCAGTTGTTTGG
TTTGGAGTAGACTTTACTTTTTCTTGGGACATCTCTAAGGCTCTTTTCTGCTGATGTGCA
GCTCGCTGTTCACGTAGTTGTTGCTCCATTTTATCTTTGAGATCAGACGCATTTGGTAGA
GGTGCAATGTTTCTGTGAGGCAGCTTGCCAGTTGATGTGCGCGTTACAGGAGTTCCGCGA
TCGCTTTTTTCACCATATTGACGGACTTCCCATAATTCCAATTTGTCCTCATCCACCCAC
TCCTCAGAGACCTGTGGTTCAGTATTTTGAGGAGATTCTGCGCGTTTTCTTTTTCTTAAG
CCGCTACGAATAGATGTTACTTCTCGTACAGTCTTGGGCAATTCCAGAGGTATCACGACA
CGTCTTCGCAGATATTGAGTGTGTTCAGAAAATTGTCCCATATGACGATGTTTTAGCAAT
TCTAAAGAAACTATTTCTGTATCGGTGGTTAATTGGTGTTTACCGTCTGCAGTAGCTGGC
TTAGCAGCCATATCATCCCATCTTAAACACGCCCACATAATACGTAATTGTAAAGCAGCA
CTGGCGAGCCATTGCAAATTCACCGTCCTATACAACCAGCATGTTTTAAATAATGGTCTA
GGGCAAGGATAAGGCCAAACACCTTGATTAGGTTTTGCATTGTGACTGAAACCAGATATA
CTACTATGCCCCGCCTGCCTGCATAGTTTCCTTAACTCATGATGAGGTAACACCATTATT
GTTTTTGATTTACTGCGAGTGTGAAATGTAGAGCACAAAGGGTATTTTACTGGAGTTCGT
TTCTTTTTCTTTTCAACAGCAGTGGTCTGCACCCTTTTCAAATAAATTTTGCCCTTTGGA
GACTCGGCTGAATATATCCTGACAACTTCACCCTCTTTTTTTTCGGACTTTAAGCTTTTC
TCTTCTCTTTTAAAAGTCTTTACTCCACCAAATCTTCTATTGACAGATGCACGATACTTC
GCTTTTTCTTCTCTTTTTATTTGTGCTAAAGAACAATTATATGAAGAATCTTTAGTCTCA
TTTTTTGTAGTATTAGACGATTTGGATGATTTTCCTCTAGATATTTTTAGTTTCGGAATT
GGAGGGCGCGTCTTATCGGTATCAGAAACATTATGTTGCTCACTATCAGTCAGCTCTTTT
AATGGTCCAACTTCCATCTCATTTTCGTTGTTGCAAGATGTAATATCAATATCCATTTCA
TTTCCGACAGCCGGCACTGCACACTCTTCTAAGGTACTCTCAGTTTTAATGATATCTTCA
AAAACATCCGTTTTTTCTGTCTTAACATCAGAATCATTATTACTTAACTTTCTCTTGACA
AAACTGTCGCTATTTTTGTTATCATATTCCTGAGCACATGCTACAGCAGATAGTAAATCT
GTTAAGATTTTATCATTAGAATTATGCTGTGATGAGCTTTTACCAAGGAGATATTGTTCC
AATATCGAGAATTTTGAAGAATCTTTAGAATTTTCAAAAATATTGGAAGAATTTATTACA
TCACTTTTTAAAAGTTTTACAAGTTCGTTTATAAGTTTAAACTTCAGTATACATAAAGGC
GAGTAACAATCGACCTTTGCATTAATGTTAAAATTTGATAAATTTTCAATTTTATTACAA
GTTTGAGAATAGCATTTGTAGTGTTTTGTTATTTGTGATAGTTCTTGATACTTTTCTCTA
AGAACATCAACATTTTTTGTGTTTGGTTTTACAAATTGACTTGAGTCACAAATAGTAGAA
ATGTCATGTTCTGGCTCTTCATTTTCGATATCAATATTTTTGTCATCTTCATTTTTTTCA
TTAGTATTCTCTTTTTTAACATTTTGCAATAAATTGGCTAATTTCTTTTCTTCCATAAAT
TTAAGATAAGTTCGTCGTGCTAAGAAGTCGTCTAATCGAGATTTTTTAGCAATTTTAGGA
TAATATCTTCTTATGGAAGAGCTTAATGCTTTTTCAACATCTATCTCTTCAAAAGTGGTA
TCGTCTTCTTTTTGAATCACAAGGTTACGCATAGATGGTGGTAATTTTTCCGTTACATCT
TTGTTTTCATTATTTCCGTTGGAAATTAAGTATTCATATGTTTTAGGTTCAACGGCTAAA
ATTTTAGTCACATTGCCTTCTCTCACTCTTACTGCTATTTTGGTTGGACCATTGCTTAGT
GTTGGTTTGATAGTAAAATTATGCTTTTTGTATTTTCTAGTTGCAGAATTCCATAACCAA
CCCCACTGACCATGAATCCTGTATTCTTCTCCTTTCTGCTTCCAAACCTGATGACGAAGA
CCAAGAGAATATTTTACGAAATTGTAGGCGGTGCGATAACGCTCTTCTTCTTCATCTCTC
TCTTTTTTCTCTCTTTTATCTAGTTTTTTTCGTTCTTCACGCTCAGCAGCAGTCGTGCGT
ATAAGCCTAACATGACCCAGCTGTTCATGCCATGCCGGTACCCATACAACATTTTTAATG
CAAGCCTGTAGCACACACAATGCCCTTGAGAAGTCACGTGGTGCTTGACAAAGTTGGACT
GCTTGTACCCATGGTTTTCTCAATAAAGACCAATTTGGATGCATAAACTGTAGCACAATA
TTAGATTCTAACTGCAGCAGAGTCTGTCTCAAAGTTGCAACCAAGAATGGTTTTGTTGCA
TTCAGAAGACCAACCCATTTGAACTCTTGAGTAGAAGATAGAGAAAACTTATGTGACATA
TAGCGTTTTTTGTCCCTTTCCTCGTTTCTTTGAGGTTTATTTAAAGCCAGAGAATTGCTT
GCATACTGGTTAATGTAGGTCTTAAAATTATTTTCATTTCCTAATTTGAATAAATATGTT
CCATTTGACATTTGATTAGATTTCTGCCTTGTTAATCGTTCAGAAACTTCTTCTGATTTT
TTTTTAATTATATTTTTAGATTTACATATTAACTGGTTAATACTCTTTTTGTCATCATCC
TCATCTGTTGACTCTTCCTGTTCTATATCATTATTATCTTGAGAATCCTCACTCATAATA
GTCACTTCATTTAACACATCACTATCCATTGTGGGTAGGTTATCAATTTTTCCATCCACT
TTTAATTGTGGATTATTGTCTTGGTGCTTGTGTTCAGACCTATTTTTTTTTTGTTTGATG
ACATTTGTTTTTTCAGCTTCTAAGTATGATTTCCGATTTCCTTTCATTTGGTTAGTTAGA
CTCTCTGTTATGTCCATTTGCCTTAAAATTTCTTGCCTCATTTCTAATAGTTCACGAACT
AATGGTGTTTCCATTTCTTCCGAGTCGAGAACATTCAACAATTCTTCAAACTGTTGAGGA
GTACTGTAGTACCATACTTGACCATTCTCAGACTCAACGAATATTCTCCTTGCAATGAAC
CAGTATTTTCTGCCCTGTCTATCAAATCCCAAATGTTCATGACGGCATAATAGACCTTGC
TTCTCAGCATCAGGAAGACAATCAGTTACACCAACAGTCTTATGCTGCTTACACAAAGCA
CACTGCCAGTCTTCAGAAGGTACATCAAGTAAAGGAGGATCCACACACTCTAAATGATAT
ACAGCAGGGCAGGTTTCACAGCACAGAAGGTCACCCAAGCGATGACACACTCTACAGTGA
TCATCATAATGTATTGGAACTTCACTTAACAGATCATCACGGACAGGATTGGTTATTAAA
AATTGATTGCACAGAAACTGAAGAACTGTTAAACGATTTTCTACTGAAGTAAATGGATAT
TCACAACTGTTTAAAATTTTAATCACATTTTGATCAAAAACTTTATCACTTTCCACATAA
ATTCTAAGAACTTCTGGCCATGTCATGACATCTAATAAGAACAATGTAATGTTTACACTG
TCTTTGTGATCTAAAGGTCCAAAATGAGTCTGTTGAGCGTCTTCTTCACGTAGCAATGCT
TTAAGTAGCATCATATGTACTTCAATCAGCAAGTTACTTTGATCTTCACAGCTTATAGCA
GCACAAAGATCTTCTAAGCGAAAAGGAGACAGTCTTACTAAGTGTCTGAAATGTCGCAAA
ACTTCATATACACTTACAACTTGAAAGACTAAATTTTGGGGTATAATTAGATCATCTGAT
GAAGGTGGTAAATCTAAGGGTGGAATTTGTCTTCCTTGTTGCAACCACAATGGATCAGGA
CTGGGAGGTCTGTTTGTTATAGTATTAGTTTTTCGCGGTGTTCCACTCGTTGTACTAAAG
CTGCTCACAGAAAAATCACTATCGGTCGCCGCACCATCTTCGCTTCCTTCTGAACTTTCA
CTACCGCGCTCTTCTTCGAGCTCGGATTTGTCACTATACTCATCACCAAAGTCAGAACCG
TAATGATATTCAGATTCATGGTAATCGGCTGCCTGTGGATTATAACCCCGTTTCGAGTAA
GAATTGGATATTCCGCCTCTTTTACTTTTATGTGTTTTACGATCTTTTCGCTTTCTCGTA
CTTCTTCTGCTAATATCACTACCTTGAGGTGAAGAAGCTCTAGACGCCGACGGAGTGTTT
ATCATAGAAGTGTTCACAGCATTTTGTTGCAAATATTTTGGTTTTTTCAATAAATGAAAT
TGGAATTTTCTATTTTTTTCAAAACTACTAGATTTTGGGGGCCTCCCGCGTTTTTTTGCC
CCCCTTCCTGACATAATTGAGCTGTCAATTGTACACTTTCCAGCACGTGCACCGTGAAAA
CATAGTTTTGTTTACAAAAACACAATCACGGTAATAATGCATTTCAGTTTATCCAAAGCC
CAACGTTGTCATGTTCGGAGGCGTTTATGATGCTTCATGAAATGTATCACTATATGTCCG
TAATTGGTTACTGTTTACAAAGTTTTTCACAATAAAATGAAATGTCAACTCATTCACTTA
ATGAAAATCAATTAGAGATGTACAAATTTGCCCAACACATCGAAAACGCAATGACGCGAG
GGCTAGAACTAATACATGCAATTCTAAAACGCTAAACACCGACTTCCTATTGGTCGATTA
ACGAGACGCCATATCGTTTTCGTAATTTGTTGTAAAATGAAATTCTTGACATCTCCTAAC
ATATAAGATAATGATTTAGACACCGATAAAACTTTAATTACTTGTAAGTCAATAAAAATC
TACTTTCATTCATACAAATAATACTCGCTAATAACAGCAACTTCAAAATATAACTAAATC
ACTTGGTACGCGGCCATTTTCTACTTCCACGGAACAATCACTAATGTGTCTTATTATATT
TTTTAATATTCAATCACCATATTTCTATGATTTGATGTGTCAGAAGCCCATCAATACGAA
AAAAAAAACCGAATAGCAACGTGGGTAAGGTTGGTAAATAATGATGTATGTTATGAAGAG
GATCGTTGACCACGATGATAAAATAGAGTTGCCGAAATGTATGTACCACATTAAAAATCC
GATCGATCTTACAGAAGAAGATGAAATTTGTTTGAAAATCAATGAAAAGGTTCTCAAATT
TATTAAGGGTCCTAATAATAAGATGACTGAACTGGAGACAAGGCAAGATGAACTCTTGAA
CAAGCTAGAAATACTATACGAGCGGATAAAGACAATTAGCTCTCAATGTAAGCTTGACAA
TATGAGTGCTAATATTCAGTCCTCAAATGCCTCAAAAGTCGAATCTGTAATTACACCAGA
GGAAGTTGTCTTGGTGCTGAGTCCTGATTCATTGCCTTGGTATTTGAATATCATTTTGAA
AAAATCCAATTTACCAATACATACAACTTGTCATGTCCATTCATCAGTGCCAAGTGAGAA
ATTAGCAAAAATAAAGGCTTTTACTCAAAAACTTAAAACTTCTGAAAACCCTAAAGTAAA
CCTAAGGCTTATTTTTAAAGCTGCAGCAGATTCAGAACTGAAATTGTCAGCATTATCAAC
ACCAATCTTAGGAAATGTCAACATCCTAAGATATCTGTCATTAGCCTACCCTACCATAAT
TCCTTATGACCATAATGATCACATAGTTGATAATCTATTAGACATTTGCCACGTTTTGGA
GAGGACATCAGAAAAAAATAAAGAAGCAGTTGTAAATAGGCTTTTCGCTCACTATAAAAC
TTGGATTTATGGTGACAAATTTTCTGTGGTAGACTTGGCAGCATACAACTTAATTAAGCA
GTGGAGAAATACACCTAAGTTTGTCTCTAAAGTGTGGTTTGATAAATGTGAAAAATTATG
TTCTTAACTCTCACTGTTTTAATATGGATTGTTTTCATGTAATCAATAAATGAGCA
(6536 bp)

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