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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14149_c3_seq2
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_serine/arginine_repetitive_matrix_protein_2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0047485 F protein N-terminus binding
GO:0070742 F C2H2 zinc finger domain binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:11.37 TPM:11.44
ORF EntryO_BomoSK18610_5prime_partial:A_BomoSK_comp14149_c3_seq2
Sequence
(Nucleotide)
GCGGGAGCGGGAGCGCGAGCGAGAGCGGGTGGAGCGCGACCAACTCCGCTTACTCTTGTT
GAGATCGGGCGAGCTTTCGTGTTTTTTGACGGCCGGTGAACTCTCACTCTTCTTCAGAGC
CGATGGTCCTTCAATTTTCTTTACGCGCGGAGAGCTCTCGACTTTTCTTACGGTCGACGA
AATTTCATGTTTCTTTCTAGGCGGTGAGCTTTCAGCTTTTCGTGGACTTTTTGGAGAAAC
GTTTCCGCTAGTCGGACTCTTGTTTGATCTCGATGTCGGCGATTTTTCTTTCTTGTCTCG
CGCATTTCTTTCAGCAGTGTTTTTGGATTTGTCTTTCACTTCTCTCTCCTTTTCCGCTTT
ATCTCTCAATTCCTTATCTTTTTCGGATTTCTTTTTCATTTCCCTTTCTTTTTCATTTCT
ATCTCTCGTTTCTTTCTCCCTTTTGCTTTGGTCTCTGTCTCGTTCGATCTGATCCCTGAT
TTCTCGTTCTTTTTCAATGTTATCCCTGATCTCACCTTCTCTCTCGTCTCTGTTCCTTCT
GCCCTCGTGTGGCGCTGAGTCTGAGCGTGAGGTTTGTGACGTGGAAGGTCCGTTTAAGTC
CTCGTTCTTCCTTCGCATTATCGTCTCACGCGTCATCTGCGCTAATTTCGCTTTCAGCCT
GTTGAGGTCCATGCATTCGATTTCCTCTTGCCGCGACCTCTCGTCCAAAGTTAGGAAGTG
TTCTACGGTATCGTCCAGTTCGTCGCTCGACGAATCTCTCATGCAAGACACCTTCGGCTT
GTAATTTTGAACTTTTTTCGTTTTCCCTGGATGTAGATCTGAAGGTGATTTAATATACTT
CCGTTTATCTTTCTCTGGTAACTTTTCTATAATGTCGCGATATCGTTCTGGGCTGCGACG
CGCGGGCGAGTAGCTAAGACTGGATGAACTCTTGCTTCTCTGTCGGGATCGAGAGCTGTC
ATCGCGAGACGTCCTGGTCTCGTTCCTGCTTCGGTCTCGCCTACTTTCGTTTTTCGAAGG
GGAAAGATCACGTTTCTCTATAGATTTCCTGTTATTTTTCTTGGGGGTGTCACTCTTTCG
CCTGTCCCTTCCATAGTTTTTGCGGAGAGGAGATTCAGATCTGTTGGCGGACCTTCGATG
CCGCGACCTTCGTTCTGCTGAGGGAGATTTTTGTCTCGATCGACTCTTTGGTCTCTCTGG
TGATTTCAGATATTTATATCTGTCTGTTTTCGCAGGAGGTGACTGTGTTCTCTTATCGGG
AGATGGCGAGTCCTGTTTCCTTTCGTTTCTTGCGGGTGACATGGTACGTTCTTTATAATA
GCGTTCGTAGCCTTTTGTTTTTCTATCAGAATTACGTTTAGCAGAACGATCGGATTCAGA
TCCGGACGAAACAGATCGTCTGCTCGGTTTGGATTTTTTGTACGTCTTCTCCGCTTCTTT
ACGTTTTTCTTTTTGTTTAGCAGACTTCGGTGACTTGTCCCTGGTCTCCGGGGACGTCTC
GCGGCGTTCTCTGGACGGGCTCTTATTTTTCTTACGTCTAGGCTCGTCGCGAACTTCCTT
TTCCCTGCGTTTCTGTTGATTGTCGTCGGTCCGGTCTTCGCTTTTGTTTCTTTGTCTCGC
GTCTTCTTTGTTTCTCTTTGAATGGGGCTCTTCGCGTCTTGGCTTCTGGTAGTCTGGCGA
GTTAGTTCGTCTGGTCTCGCGTTTGTGTTCTCTTAGTGGAGTGTCTCTGCGAGTCCTGTT
GCTGTCCCTGTCTGTTCGCTCGGTGCTCCTGTGGTCGGGGCTGGTGCGTCGCCTCTTGTC
AGGCGGTGGCGACGCGCTACTGTCTCTAAGCGACTTGTTAGTTTTCGCGTCCCTGTTTCT
GTGCGGCGCTTGTTCCGCGTCGGAGCCCGAAGTGTGTCTGCGGTCTCGTTCGCGGCGCGA
TCGTTTCTCGTCCCTAGGTTTAGTTGATTTCTCTCTGGACCTCTCCCGGGACGGTTCCCG
CTTTCTGTTGTCCACTTTAGTGATGTAGGAGCGCTGTTTGGGCTCGTGCGAGGATTCTCT
GGAGCGACTGCGTTGGACGCGCCTGAAGTTCCTGCCGTCCCGGGCGTCGTCCCTCCTGTG
CTGGTCGTCGCCTCGTCGGTCCTCAGTCGAACGTTCCCGCCGCGCCTCGATCGATCGATC
GCGATTTTTATCCTTCGACTTCTTCACTGGCGAGACATCACGGGAGGTCGGTTGAGTGCT
GGTGCGACGTTTGCTGGTTTTTTTCTTTTTCTTTTTCTTCTGCTTCTCGTCGTCCGACGT
GGCGGAGTCGGAGTCCGCGCCCTCGGAGCTGCTCGAACTGTCGCTGTCAGAAGATTTCGA
ACGCTTTTTCTTCTTTTTGCTTGATTCGTGCTTTTCTTTCTTGTTCTTTTTCGACTTTTT
CTTCTTCATTTTCTTTGGTTCGGGCGATGCGCTTCGTTTCTTCTTTTTCTTGGCGGCATG
GTCTTCCCTCTCGTGGCTCGGCGTGCGCACGAGCGGGTACCTCTCGGCCTGTTCCTTCGC
CCTTCGCTCCGGGTCCAGGCTCGAGCCCTCGACGAACCGCGGCGATATCCCGAAGGCGTC
CCGTAATCTTGCATTCTTCTCCTGCTGAGCCTCCGCAACGGCGTGCGTCTCGCGGACAGC
TACCCTCCCGAATTCGTCCCTTGGAACATCTTTCTCACCGCTGCTGGTCTCGGAGATTTT
CGCTCTGAACGCAGCAATCCGCGCCGCTATCTCATCCTTCGGGAACCCTTGTTCTTCCAG
GCTATCTTCCAACTCTGCACACTTGACTTCAATCTTCCTTTTCCTCTCATGATCGAGTAT
TTCTCTATTTGGTTGTTTGTTTGACGCCGAATCCAACTTGGCGATCTCATCTTCAGTCCG
GTAGTTGACGGAGTCTTTTGTTTTTCTTACTGTGGCCCAATTTCGCTGTACGTAGCCATT
TGTACCGGAGCCCCGTGGCGTCGTCAACCCGATCCCATTATACATTATTTCGTATTATAT
ACAATATTATTAGATTAAATGTTTATGTTTAAAAAGAATTGAACACGACCATCTTGCTTG
GT
(3062 bp)

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