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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14136_c1_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_DNA_polymerase_theta-like_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0071897 P DNA biosynthetic process
GO:0097681 P double-strand break repair via alternative nonhomologous end joining
Transcript
Level		FPKM:2.61 TPM:2.63
ORF EntryO_BomoSK18529_5prime_partial:A_BomoSK_comp14136_c1_seq1
Sequence
(Nucleotide)
AAGAGAACCAAAATAAAAAATATATGGATCACTGGTTGTTGTGGTATGACTATGAGTGAG
GCAGCTAAAAATTTAATTAATGAAGCCAGAAAGTGCCTTGAACAAGAAATAGGGGTAAAT
GAAATAAAGTGGGCTGTTAAAAATGAAAATTCTGAAAATTTTGAACCCAAAAGGATATTA
GGATCAGTACCTAATGATAATAAGAATACATGTGATGATAAAAGTCAAAATAACTTAAAT
GAACAATTTGAGCAAATTAAAGAGAACAGAAATAATTTTAATTCTCAATCCCACCAGTCA
ATACTTTCTGTTGTAAATCCACATAAATCCAGTTTAAAAACTGAAACAGATGCTATTATA
GTTAAAAAAGTAGTCACCCAATTGTTTGAAGATAATGATGGTGCAGATCAATATGTAAAC
AATAAAAACGATTTGACTGTGTCTGCATCTTGTGCAAATGATACAATAAATCAGAAGAGT
ACATTAATTACAAGTAGTGGTGACATTGTCTGGGATTCTCTTAATTTGACAGAAACAGCT
TTAGGGAATATAGCAAGGCTTCAGACTCCTTACAAAATACCCAAATCATGTTTAAGCGAT
GAAGATTTGGCAGCCACTACAATCAATAACATCAAGAACTCTGTGATATCAAGAAATACC
TCAGAGAAGGACATAAGTTTATTTTCGTCTGATGGTGAAAATTCAAGTTTATTTGAAGAT
AGTTTACCTTTGGATTTGATTCCAAGCAAACTACTCCAAGATGTTGAAACTCCGAATAAG
AGAGAGCAGTTAGAGGATTTTTACAAAATTAAGTCTAGTAATGGTCTAGAAGAATTGACT
GAGTCAGATGAAGTTGAAGAAATGAAATTAGTGTATGAGGAAGACCAAGCTGATAAAACC
AATGAAGTCAAGAATTCAATAAAAGACAAACCTTTACAACACTTCAAAAGTCCCATTAAG
AGATGTTGTGAAACTGATAGCATACAGACTGTGATAAAGAAGATCAAAGTTGATCTAAAA
ACAAATATTAATACTTGCCGTAAAGATTGGCCAAAATTACTTGACACCCCCAAACTAGAA
AAGTTTTCTATAAAAATTTCCACAAACACCTTGAATTGTTTAATATTAAGGGTCTATGAC
GTGTTGAATAATTTTACTATTATGGAGAACCTAGAAGAAGCTTCAATTTATTTTAATTTT
GAAAAATGCAAAAGTGCCAATGAAATTATAGGACGTAGAGTGTTTAATGAATTGAATATA
ACACAAAAGGGTAATATGTGTACAATAAAGGGAATAGCTTTTTGTTTTAGGAAAACAGAA
TGCTTTTATTTAGATCTCGTCTCTCTCGATAACAAATTAGACATAATAAAAGATAAAATG
AAATCGTGGTTTCAAAAAACTAGTTTAAAATTGAAGATGTTGAATTTTAAAAACAATTAA
TTTACATCTAAAGAAGTGGCTCGGTGTTGACTTAAATTCTATGTGTGTGGATGTTTCTCT
GGTGGAGTGGCTAAAGCATAGTGACGAAAGAATACCCGATGTATCTTATTTGATGAAAAA
GTATTCCGGAATGGACTTAGCACAGTTAACTATAAAAGTGGACAATCGTCAAACGAAACT
AAAGAACTTGACGTTGGCTCAAGAGTCTTGTGTGAAGGCGTGGGCTATAGAAATGATATC
CGAAAAACAACAGAATGCGTTGTATGAAAGCTATCAAAACGCTATAAACGTAGAAATCAA
GGTTTTGAAGATTTTATCGAACTGTGAACTTCATGGAATAGTCGTGGACAAAGAGTTGGT
CTCGAGGCTGTTAACCGACGTGCGCGACTCTCAGGATGTCTTGCAGAAGAAAGCCTTCAA
GATTTGCGGATATCATTTCAATTTCAACTCATCAAAAGACGTTGCTAAGGTGTTAGGTAT
ATATAACGGTCGTAAAACAAGCACAAGGAAAAGCGTTTTATCATCTCACAACACTCCAAT
ATCTAGTATCGTGATGTACTGGAGAAAGTTGAATGCTATATTAACGAAAATTTTGTACCC
GCTCACTGAAAAGGCGTGTATATACAGTGAAGGCGATCGGATAATGTCGTCGTATTCAAC
ATTCACTTGTACGGGTAGGATCACGATGCACGAACCGAATCTACAGAACGTTCCTCGCAC
GTTTTCCATTCCACTACGTTACCTAACCTTTGACAACACCACAAGTGACGAAGTCATAGA
ATTCAACTGCAGGAACGTATTCAGAGCCGCCCCGGGCTCGGTCATGGTGTCTGCGGACTA
CTGTCAGCTGGAGATGAGGCTTTTGACGCATTTCAGCGAGGACAGTGCCCTGACTAGAAT
CATGAAGTCCAATGTTGACGTGTTTAAGTCTATTGCGGCTTCTTGGAGCGACGTACCCGA
AGGAGAGGTAGACGACGATCTTCGCCAAAAGGCCAAACAACTTTGCTACGGCATTATATA
CGGAATGGGAAATAAGACCTTATCCCAACATTTAGACGTCTCGGAAATGGAGGCGTCATT
ATTTATGGATTCGTTCGAGAGAACCTATCCAGCCATCAGAGTGTTCACTAAATCTGTAAT
CGAGGAGTGTAAGAGGCAGGGCTTCGTCGAAACTTTGAGCGGCCGACGGAGATATCTTCC
GGATATAACCAGTCATATTACATCTAGACGCAATACCGCAGAACGTCAGGCTGTGAATAC
AATGATACAAGGTTCCGCTGCGGACATTGCGAAGTCTGCAATGTGCTCCATTGAAGACGG
AATAAATAGTTTCAATCCTAAACCACGCCTTATATTACAAATGCACGACGAGCTCATCTA
TGAGGTTCACGAAACAAACAAATCACGTTTTATATCTCTCATGAAAAGTGTTATGGAAGA
TACAGTCGAGCTGAAAGTTCCTTTGCCCGTCAAATTGAAGTGCGGCTACACGTGGGGCGC
CCTTGACGAAGTCGCGCTCTGATGACTCGTTCCGCGATACAAAAATAAAACCTCCTTCTA
TAATATAATATGTAGCTTTGTATTCTTTTTTCGAATAATAAAATAAATAATTTTTGAATT
GAAAAAAAA
(3069 bp)

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