SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14134_c2_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_probable_nuclear_hormone_receptor_HR38_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0030522 P intracellular receptor signaling pathway
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.62 TPM:1.63
ORF EntryO_BomoSK18523_complete:A_BomoSK_comp14134_c2_seq1
Sequence
(Nucleotide)
ACCGACCGTTCGCCAGCGCGTACCTGCCTCCGCGCTCTGAAAACCGACTGACTGAGTGAG
TGAGTGCGCGTGCAGTGAGTGGAATGTGCTCAGCCGCATGAGGATCCTGCTAAGCGAGTT
GGGACTTTCCGGCGCGTGCCTCGGTTTGACCCTGGAGCCGTGCGCCTCATCGCTGGAAGC
CGAAAAGCCTGCGCCAGGGCCGAGCGCCATAGAGTCGCGCTCGCCAAGCGCCTTCACTCC
TAACTCCTCCAGCATGCTACTGCTGCAAACACACAGCAACTACGGTTCGTCCTTCTCTGA
TCTGCTGTCACCACAATATCAAGAAGATTCCACGGAAATCTTAGAAGAAAACCTAGATCC
ATTCCCGGACGTAGAGTTTCACGCACCAATCGTTCCGGAATTTAAATCGCAACGGGACAC
CTCGTTCAGTGAAACATCATCACCGATACCTGGTCCTGCGTTGCCCAGTTTCGAGGAGAC
ATATTCAGTTCGGTATCCGAAACACGAAATGGCAGAATTCGGTATCAAAATGGATGAAGA
TTGCTACAATGTGAGTGCATATTCCCATCAGGGACATACGTCTACTCAACTTCTTTACCA
ATATCATCAACCACCGATTCCTTATGTTCCGTCGACGTACTACGCGCCACCTCAGCCTTG
TAGTCCTACGTTTGACACCGTAACTCCAAACCAAGATTCTTATTCTTTGCCACCTTTTCC
AAGCACTGTTGATTTACATATATCAGCTGAGCAGGCTGCTAGACAACGGCGTTCGTCATT
ACCTGTGCAAAGATCTGAATCCAACAGCTCCAATGACAGTCCAAAATTGCACGGTACCAG
AGTTCACTGTATGCAGCCTTCCACTCCGAATTCAGCATCAAGTTCTCCTGGAGTAGCACC
TGCTGATAACACTGGACCACGTGCAGCACCATCTTCGCCCAGCCAGCTCTGTGCTGTTTG
CGGAGATACAGCCGCTTGCCAACATTATGGTGTCAGAACTTGTGAAGGATGTAAAGGGTT
CTTCAAGAGAACCGTTCAAAAAGGATCCAAGTATGTTTGCTTGGCTGAAAAATCTTGCCC
TGTTGACAAAAGAAGACGGAATCGATGCCAATTTTGTCGGTTTCAAAAATGCCTCGCCGT
GGGTATGGTGAAAGAAGTGGTTAGAACTGATTCTCTAAAAGGCAGGCGCGGTAGGCTGCC
CTCAAAGCCTAAATGTCCACAAGAATCTCCACCAAGCCCACCCATCTCTCTGATAACAGC
CCTTGTTCGAGCTCACGTTGATACTTCGCCGGACTTTGCTAATCTAGACTATTCTCAATA
TCGTGAGCCGAGTCCTCTTGAGCCACCGATGTCTGATCTTGAAGTTATTCATCAGTTTTA
CTCTCTTCTAACAACATCGATTGATATGATCAAACTTTTCGCTGAAAAAGTACCTGGATA
TGGTGATCTATGCCCCGAGGACCGAGAGCAACTATTTGCTTCTGCTCGTTTGGAACTGTT
CGTTCTACGGTTGGCATATCGTACTCGACTTGAGGATACTAAGCTCACATTCTGCAATGG
GCTAGTTCTCGATAAGCGACAGTGTCAGCGATCGTTCGGAGACTGGCTTCACGCAGTTCT
GGATTTCAGTAATACGCTTCACTCTATGGATATCGACATTTCTACATTTGCCTGTCTTTG
CGCACTGACTTTGATTACAGATAGACACGGCTTAAAAGAGCCGCATCGTGTGGAGCAGCT
TCAAATGAAAATTATCGGATGCTTGCGAGCGCACATGCCGGGCGGAGGTGGATCGAGCAG
CGGCGCGCCCCACTTTAGCCGCGTGCTGGGTGCTCTGCCCGAATTGCGCTCTTTGTCCGT
GCAAGGCCTCCAACGCATATTCTACTTGAAGCTAGAAGACTTGGTCCCGGCACCACCTCT
TATCGAAAACATGTTTCGTGCCAGCCTTCCCTTTTAGGCGTCCCGTAGTCCGCACCGAAT
TTCCGAGGACCACTCCCGCCTTGAATCCACTTCTCCTTTAGCTGTTAGAGCCGACTCCGT
TATTTTTGTAAGGATTTAGTATAAAAATATTTTTCTAGACTCTAAATGAACGTTTATAGT
ACGCGATCTCCACGGAATCGGTTCGTGCTAATTTTACGAGATTATTAATAAAATTAAAAG
TACTCACATACGATGACAGTTTATGATATGAATAAG
(2196 bp)

- SilkBase 1999-2023 -