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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14130_c1_seq1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_fasciclin-3_isoform_X5_[Bombyx_mori]
Ontology
GO:0004872 F signaling receptor activity
GO:0005102 F signaling receptor binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005913 C adherens junction
GO:0005918 C septate junction
GO:0005920 C smooth septate junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007413 P axonal fasciculation
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007611 P learning or memory
GO:0008039 P synaptic target recognition
GO:0008355 P olfactory learning
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016200 P synaptic target attraction
GO:0016323 C basolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0031594 C neuromuscular junction
GO:0031965 C nuclear membrane
GO:0042803 F protein homodimerization activity
GO:0050839 F cell adhesion molecule binding
GO:0055037 C recycling endosome
Transcript
Level		FPKM:6.69 TPM:6.73
ORF EntryO_BomoSK18513_complete:A_BomoSK_comp14130_c1_seq1
Sequence
(Nucleotide)
GTCAAAAGTGGTGGTTCAAGGGCAGTAAGTTGTCACATTAATTATAATTTATAAACATTC
ATAAGTAACAGTATCACACGCTTAAACGAGTTTCACTTGATTTTAGTAAAAAAAATCCGA
GATAGAAAGCACACAAAGAGCTTTCTTATTGTCAAAAGCTTAATTGCATAATTACCACAG
TCTGAGAATGAAAGAGCAAGAAATTAAAAGATTGCCAGCCTGTGAACAAAATTTTCCTAT
TTTTTTCGGCACATTGTGATTGATTACTTTGGTGATATCACAAATAATATCTCATGAGTT
AATAGTGAAAATTTTATTATAAACATTTAATAATCAACAAATTTACTATAAAATTCTATT
ATATATTTTTTTTTAATTTTGTTTCAAATTTCTAATCTGCCAAATCTACTGAATTTATAC
GAATATATTTAAGAACATTGATTAAGCGTGTGAACAGATATGTAAATATAAAATTCTAAT
TATTATTATTTTTTATTAATATAAAAATGGCAATGTTTCGATCTTACTATTAAAGCGAAA
TACATACACAATAATTATATGACAGTTCTGTTTGTGAATTTTTACGGCATATTGGATCAA
TATTTGTCAAATGACAGTAACATAAGACGCTAACAGTGTAATGTTACATATTTTTCGGCA
TAACATAATCTAGTATATAAAAAAAATTCTCCTCATGATAATGTTTACATTACATATCTA
AAATAACAAGAAATGATAAATACATTCAGAAAAAGACTAATGTAATTATGATTTGACAGA
AAACGCTTAAGTACAGCGATTTTATAACATTATAGGAGCCGTGCGAGAGAGATAGAAATA
CGCCTTCTCTCTCGATCGATTAATCATTATGGAGGAAGGAATTTCACAAAAAAGAGTTCG
TTTTAAAACAGAACTATCACCGCCACTAAAAAATAATCCGACGTAAAATTTAACTTAAAA
TTAAACTACAATAATATAATTAATTACAATAAAAAAAATACAAAAAAATCACAATATCGG
TGAATCGAGACTTAAGCTTTAGAATACAACTAAATTTGATTTTTACATCTAAAATCGGCA
GTTAATAAGCCGTGTCATGATTATTTAAGTAGTTTAAAATTCTATGTCATTTTATGAATT
TCACTTATCTGTGAATTCATTGCTAGCTTTAGGAAAAATACACATAACCTAAACTGTAAA
ACAATGTCTAAATTACTTAGAAATACGAATCATAAATGTCGGTTCATTCCTTAACGATAT
AGACGAGAAAGATCCAAAATACCTCGTCAGTAAATAAGTTTAGTAATAACTTTAAAAATC
AATACGCAAATGACGTATTAAAATTTATAAATGCAAAAGAAATCAAGCATTTTACCGCCA
TTTTGGATATTTTAGATTTTTTTTCTTAAACAACACTGATCTTCTCTATATTTGTATCGA
ATCATTGAAAAATCCATTTTATTGACGCGAATCGACATTTATGATTGAAAATTTGTATGT
AATTAGTTAATTAAAACGTTGGAAATAATAAAATAATAATTTTAAGCGCTAACGCTAACA
GTAGCTTTAATTGCGCGTAATAAAACTAATTTCAATATTAACGTTACATACATTATCTGT
ACCTTTTTATGCATTAAACTAAACATTTATTTACACAACTTGGTGGTATGTATGCTATAT
AAAAATAAAGATGCCGTCTCGGTGAGTTTTATCATAGCTTCAACGTTCAGTCGCGGCGCA
TATTAAACCAAAGTTTAGCATTTCGATGTTACTCTTAGATTAGCGTCAATTTCCGACAGT
ATGCGAGGTTGGCACGGAAGTGTAATATGCGCCGGACCTTAATTGCCATCGCGTTTACGT
CAAGAGCAGAGCAATTCATAATTATTCATATATTATCATCAATATATTTTGTTAGGTGCT
TGTTCACGTCGAATCGTGGGAATATCGCGCAAAAATACCAAGTGATCGTAATGAAAATGC
AGTGAGGTGTAATGGCGGGCAGCGTTGTCGCCGGAGACGTGGCAGACACCCGGCGGACAC
TTCCAGCACGGGCCCGCGAGTGTCTCCGCGTCCACGAATCAAACGTGAACAAACACTAAC
AGAGTAAACGTGACGTAAACATAAAATTTAAACTAATTCGAGACTATTTCATTCGAAATC
TTCCTTTTTGTGTCCTTGATGATTATTATACTAAAACTTATGATGTTACTATAAAACCCT
TGCGATTTAAATTATTAAGACGATGGGTATTCGTTGTAATATAAGTATTACAAACATTCT
AAGAGATTCCTATCAACAATAAAAAAATTTCACGAAAAAATCATGCAAGTTTTTTAGCAG
CTGACATTAAGCTGGGCGCATATTGTACGACCGTTTCGATCTGATAAGTTCATAACGGCT
TGTAATGCGAGAATTCAAGAAGAATGATCAAGATTCTGGCGTCAAGATTCGCAGTACAAA
TTGCATGTGAGTACTCAGTGGCCGTGAGTAATACCAGAGACACAGCCAACCGCTGCCCAC
CGCTGGGAAATATTTACTTTAAATAATTAATCTAAATATTATAGTCTAAGAGGTTGTCAC
GCTGAGACATAACAGTCTAATGCACAGGAGATCCCGCAGAAACAGCTTCTGCAAATTTAT
ATTTGAATTTTATCTGTTGCTGGCGAAGTTTGTTGATCGTTTTTGTAAAATTAAATAGTT
GATTGCGTGATTTTTTCGTTTTATCGCCTTGAGGTTCTTTGAGACGATCAAAAATTGTAA
ATCTAATTTAATCTTAACATAAATACAAGTTTGAATGTATTTCAATTAGATAGAATATGA
ATCGTTATAAAAGATAGAACTGTCATCATTCCAACAGCGCTATTCTAAGTTGATTTATGA
AAGCGACATTTTAATACGAATGTACATTCATTTAGATATAAAATATTTTTGTTACAAAAA
TTTATTCAAAAAAGTCATTAAGTTATATATTTGTTATTAATATATTTGTGCCGTATATAA
ATATATAGATCTATTTTCTTTTTAAAATTAAATTAATTAATTAAGTAGAAATATGTTTTA
TCGATTGTTAGCATTGTTCCTGAGCTTTAAACGAATTTCAATTTCATTTACTGAAACGGA
AACATAGCCGAGAGTCAATTATTAAAATTTAACTGTAACTGTGTAAGTATGTAATGAATT
TCTATTTCGTTCTTGGCTCAAAAACTACACAAGACTTAATCAAATTTAAACGTCACTATG
ACATTTAACTGTCAATGTCATTTTGAGTTTGGCGGTAATCGATTTTAAACCAAGACAGCG
GCGAACGAATACGGTATATCGATTATTTTCGTTATCAAAGCTCAACTTAAAACTGTAGCT
CTGAATTAAGCAAGACCCAGGCTCCCAAGAGCCCCCAACATGATTATATTCATTCGCTGC
TATTAAATTATATTTAAACATAGTTTTATTACAGACATTATCAACGCAAATCGATTCACA
AGTTCCACGGGCATTATTAAAACCACTTTAACGGTTTTCAGGTCTATGTCGACCGTGAGG
ATGAAACATTTAACCCTTTGAGAGTGAGCCGTCGATAAATCGACTCTTTATTAATGCATA
TAAGGTGGAAAAAAGGTTAAGATTTTTTTTGAATGTCAGAAATTGTATAACAAATATGTG
CATGATTCAAATCGTGAAAGCAGTTTTAATAATACTCCTCGGGGAACAGGAGACGGTAAT
GTTCCACCGGCCATCGGGTAACATGGTTGTGGGCAGGGCGACTAAATTACCGTGACTTAC
TCATTACTCAAACGGCCGTGTCCGGTTTTTTTTCTGGTAGCTTAGAGTTCCCGTTCGTAA
TGTACTCGGCGTGGTCGTGGGTGGGATTCTCGGAGCCCTTGATGTCATCGTGGGATGGCA
ACGGCGCTTCCGAGTCCGCCCCGTCCGGCATATCGATCCGATGGGATCGTCCAGCGAAGC
ACCATCTGTCGGTCGCGAACGCGAACACACCCAGGAACACCGCGATCAAGAGGACGAGTA
CGGCCACCACTATGCCGACTATGGCTCCGGTGTCTAATTCAACGCCAGCAGGCTCGTCCA
TAGTGCTCATTCGGAGTGTGAACTCCTCCCTCCCAAGGTCGTTGAAGACTTGAAGGTAAT
ACGTTCTCTCAACGTCCTCTTTGGTGATGCGAGCGAGATGGAGGCTCACATTGTAGTGTC
CATTGCCCAAATGAAGAGGCTCCAAGGCCGTGATGGCTCCGTTGTCAGTGGAATGTGGGG
CGGTTATCCTGATGTCGCCCACCATCCACACCGCAGTGGGAGGGGGGTTGGAGCGGACGG
TCACGTTCAGCTTCCCTTCAGCTCCGAGCTTCAGTCCGAAGACGGTGATAGGACCGGATT
CAAGGCGCTTGGGTGGATAATGCACAATAAGTTGTCTCTTCGCTTCTCTGGGCTGGTCCA
AGGCCTCGTGTTCCGCCCGGCAGGCCAGCATTCGGTTGTTGTCGTCAGCCCTGATGGTCC
TCGTGATGTTCTGGCTGACGGTCTGCAGGTCGGAGCCTGGCTCGTCGGTGACAACTGGCT
GATGGACCCCTTCAAGCAGTTGCTCGTCATCTAAGAACCACAGGATCTTGGCGGCCGGTC
TGCCGTTCGGTACAACGCACTGCGCCGAGAATATGTCCTCGTCTTTGAACTGAGGCTGGG
GGGGAGAGATCAGGTGCGGGTCTCCGGGGGCCCTGGCGACAAGCAGCCTCATGGTGCCGG
TGACCTCGATGTTGCTGGACTGTGGCGGCAGGACGCAGGTGACATTGCCGTTCCAGTCTT
CCCTGATGTTCTTGATGTGCGCGCCACATTCTCCGGTTGTGAGTCCTTGTCCGGAGTACA
CGACGTCGCCTTCCTGGTTACCAGGTATCAGCCTGTACGAAGTGGTGCCGACGATCATTC
GACAGGAGTCTATCTGATACGGCACTTTGCAGAGAACGATGAGTTCGTCGCCGATCCGAC
GGACAGCTTTGATGGGGGTGATCTCCACATTTTGACCTGACACAAAGGCGATCACGAGCA
AACCGAAAAGGGCGGCAATAGCGGCCATTTTGTATAACCACGGACACTGTTACTGACTAA
CTACACGATCGGGCATCACTCAACGTGCCCACGGAACGAAACTGAACTGTCTCACGCACG
GGTCGCTTCTCGATTCTGATATCCAACGGCAATTCACTTTTACTCCTCAAATAGTTTTTG
TTACACGAATGTCGGTAGTTTCATGTATTTTTTCTCTTTTTTTTTGGTTACGGTCGAACG
CGGTACCACAATCGCCCACGCCACACCTCACTTTCAAACCGGTTTTCCCGAGGATCGCGT
AAAAGTACGAACGCGCGCGAGTCAAATACAACCTATCACCATAAACGCTAG
(5391 bp)

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