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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14128_c1_seq12
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:20.71 TPM:20.83
ORF EntryO_BomoSK18511_complete:A_BomoSK_comp14128_c1_seq12
Sequence
(Nucleotide)
GCTAATTTTAAATAAAGCAAACAGTTGTTCAGATAAACTTAATCACATTTTATGCACTGC
TCAAAATGATTAAGAAGCTAATTTTGTGTGCTGCGCTTTTTATCTTAGATGCTAATGCAG
GAGCAATTGATTTCATCAAGCCTTGCGCTTGGAACGATAAGGCTTGCATTTTAGATTCAT
CAAAATTAGCGCTACCGTATTTTGTCAAGGGTATTCCTGAAATAGGAGTCTCTCCGGTGG
ATCCTTTTACCATTGATGAAGTCAACGCCGATAATGGAGAACTGAAGCTTCTGTTCAAGA
ATATAAAAGTGGAGGGTATTTCGAAATGTGAAATCAGTGAAATAGAGAGACCAACAGACA
AAACTCATTTAAGGTTTGTTTTACATTGCCCCATAGTGATAACGGGCAAATACAAATCCG
GCGGCAAAATATTATTAGTGGACGTTGAAGGAGAGGGAGATACTGAAATCAAGACCGATA
AAGCCCGGATCGAAGTAGATATAAAAATTGTTCGATTATATAAATAACACTAAGTTATAC
ACAGTTATACTTTGTATTTATTTAATATTTAAATGTAGATGAAAATACAATGCGGTGGAT
GTCACGGAGTAGAGAAAAAAAAGTAGTGCCATAGATTATATTATATCATCTCATATTCAC
ATTGAGTGTCAAGGCGCCAAATTTAAAATTATTTCAACACTTCTCCTCAATTTAAGCCTT
AACAATAAAAGTAAATACTATTGTTTTATATTAAGACAATTATTAAACCAATGAATTATA
TGAACACATTCCCAGTTTAGATCTTAAGAAAGCAAATTTATCTCTACATAATGCTTTGGT
AAATATATCTGCATACTGATTGTCTGTACCTACAAACTCTAATGCAATTATCTTTTGATG
ATACTTTTCTTTAATAAAATGATATCTAACTTCAATGTGTTTACATCGTTTGTGAAAGTT
TATATTTTTAATGACACTTATAGCACTTTGATTGTCCAAATGAAGAGTCATTGAATTTTG
TTTATATTCACTGATGTCACTTAAAAACTGTTTAATCCACATTGTCTCTTTAGTAGCAGC
ACAAGCAGCAATGAACTCTGCTTCAGTAGTAGACAGGGCTACTGTCTGTTGTCTTTGACT
AGACCAAGTTATAGCTGCTCCATTCTTGATAAAAACATAGCCAGTAACTGATCTACGGTT
ATCCAGATCATTTGCATAGTCTGCATCGCTGTAGCCTGTAGTTTCTGACGGTTCTGTGGT
TTTAACATAACACAGGCCATGGTCTATTGTATCTTTCAAATATTTGAAAATCCTCTTCAC
TGCGTTCCAGTGACTTTGGTTATAACAATTTAGATAACGACTCACCAGACTGACAGCAAA
CATGACATCGGGACGACTCACTATAGCCACATGCATCAGGGAGCCGACCGCTTGTCTGTA
TGGTATACTTTTATTAGGTTCTTCATTACCCTTTTGCAACTTTACATGAGGGTCAACTGG
AATACTGTTTGGGTTAGAGTTATCCATATAAAAATTTAATAGCATTTGTTTAATATATTT
AGTCTGATGTATGAATATACAGTTACTAAATTGCTCTATTTGCATACCCACAAAATTACT
AGGCTTATTTAATACTTTTATTTCAAAAATTATGCTCAATTCTTTAGTGAGCTCAAGCAA
TGCAGATTCATCTGTTGAGAATAACAATCCATCATCAACATATAGGCAAAAATAACATTT
CTTATTATTAACTAGACCAACATACACACATTGATCTGCCTTAGTGTTGACAAAGCCATA
CTTCTTCAGAACAGTATCAAATTTGCTGTTCCAGCACCTCGGAGCCTGTTTCAAACCATA
GAGGGATTTATTAAGTTTACATACCATGTTTTCTTCACAAGGTAGGCCTTCTGGTGGTGA
CATGAATATGACCTCCTCCAGCTCTCCATACAGGAATGCTGTCTTCACATCAAGTTGAAT
AACTTTAAGATTATTCTGAGCAGCTACAGATAATAATATACGTATAGAATCGTACCTCAC
AGTTGGTGCAAATGTTTCATTGTAGTCTATGCCTTTGGTTTGTGCATATCCTTTGGCACA
CAGCCTTGATTTATACCTTGGTCCGGTTGGTTCATCCTTTATACGGAATACCCATTTACA
ATTTATAACTTTGGTATTAGCAGGTCTCTGAACCAATGTCCATGTATTATTTTTCTGATG
AGCATGTAATTCCTCGTCTATAGATCTCATCCATTTCTCTTTATGGATTGAGTTCACAGC
TTCTTTATATGTTTCAGGAACGTCCAAAAGCATAACTTCATCCTGACACAAGTATGTATT
CTCTTCTGGATCATCAGAAGACTGTTGCACCTTCTTCTTTCGGCGTAGAGTTATGTTAGA
GATAGGGAGACTATCATAACTCCTATCAGGTAGGTAGTCGCTGTCTGATGATTTAGTGTC
ACATACAGTATCATATGAACCTGTTGAAGTAGAATCATCTGTCATTTCAGATGTTTCACT
TTCTTTGCTGTCATCAATATTCATTGATGGTTTCTTTTGAGATAGTTCTATGGGAACATA
GTCCCTTTTGACAGTTGATTCAAGGAATGTAGCGTCTCTGCTTTTTATCACTTTTCTGGA
ATTTGGTATTATGAATCGATAGCCTTTGGTGTGATCACAATATCCAATAAAGATCATCTT
CTGTGCTTTTGGGTCCCACTTTCTGCGTTTCTCCTGTGGTAAGTGTACCATAGCTTCACA
GCCAAATATACGCATATGTTTCACATATGGCTTCTGTCCAGACCATAACTCTTCTGGTGT
TTTAAATGACAAAGACTTTGTTGGTGAACGGTTTATGATATAAGCAGCAGTGTGCACTGC
ATCAGCCCAATATAGTTTAGGTAAATTGGCATTCAGGAGCATACACTTTGCTCTTTCTAT
AAGACTTCTGTTCATTCGTTCCGCAGTCCCATTTTGCTCTGGAGTGTATGGTGTGGTTGT
TTGATGTATAATTCCACAACTCTTCAAGTAATCAGAAAAATTGTTATTGACATATTCCAA
TCCATTGTCTGTCCGGAGAACTTTTATACGAGCTTCAAGTTGATTTTCGACTTCATTTCT
GAATTCTTTAAACTTTTCTAGAGCATCTGACTTATTCCGGAGAAAATATACATAGATCTT
CTTTGAATAATCATCCAGGAATGTTATGAAGTATTTAGATCCACCGAGTGTTTGTGTTTC
CATAGGACCACATATGTCTGAGTGAACCAATTGAAGAGGGGTTTGTGCTCTCTTGCATTC
ACTTTTAAAAGGCAGCCTCGTTTGCTTACCTTCTTTGCAGGTGATACATGACAGATTTTC
TGATTTTTCAGAGAAAATTACATGATCTACATTGTCAGACATCTTTTTCAGACTATTAAA
ATTCAGGTGTCCCATTCTTTGGTGCCATAGGTAAATATCCTCTGCGTCAACATCAGACAT
GCATGCATAGCCTCTTCCAGGCATATTTAGCCGGTACATGTTGTTGATGATACTGGCCGT
TGCTACTATCTGACCTCTGTTTATAATAGCACAGCCATTTTGATTAAACCTTACTTGGCC
ACCGCTTCTGACAATCTGGCTAACTGATATCAAATTAGTTGCTAGTTCGGGAACACATAA
CACATTTCTGAATAATAATTTATTTTCTTGACCCTTCTTATTACATACATTTAAGCTCAC
TTGCCCTGAGCATTGCACATTTAAAATTTTGTTATCTGCAGTTCTAATTGTCTTTACAGA
AGGCGTGTCATTCTCATTTGACAGCAAACCTCTATGTTTGGTCATGTGTGAGGATGCACC
TGAGTCCACGTACCAGGCATCATCTTGAGTCGTAGATGCTACAAAAACAGCAGCATATGA
GTTACTTGCTTTTTGTGTATCTTTAGTCTTGTTTTTACATTCTGGACTTTTATGTCCATA
TTTATTACAAGTGTAGCACCTTGGTCCTTTTGATTGCTTTTTGGAATTCTTATGAAATTT
CTTGGTAACTGCAAATGCTTTTGAGTCATTTTCAGGTGGTCTTACATCTTGTAGTAGTTT
TGCCTTTACTGAGTCTGAACTGATTTTCATGCCGGAACTCTCAATAGCTATTATCATAGG
TTGGTAAGATTCGGGTAGACCGGAGAGCAGCAGTGTACCTAGCCACTCGTCATCTACTTT
AAAGCCTATGTTTCTTAGCTTGTAGGCAGTGTTAATAATTTTGCTTACGTATTCCTCTAC
ATTTTGGCATCCAGCAAGTGATGTATTACAAAGGTCACGCAGTAGACCAACTCGGCGTGT
TAGCCCGGAGTCATCGAATGCTGATGTTAATTTGTGCCAAACTTCCTTCGCAGTCTTCGC
CTCTTGTATGTGAACATAGTTTATCGGATCCACTGAGAGAATAATCTTTGTTTTTGCTTT
AATATCTCGTTTTGTATCTTTTACCTCATCTTCTATACAATCCCACAGCTCCTCGTGTTG
CAAGTATGTTTGCATTGCAAATCGCCAAGTTGCAAAGTTATCACGGCCTGATAGCTTTTC
AATTAATGCCATTTGATTATTCATTGTGATTGATAATGATATTCGGTGGATTTTAGTTAA
AAAAAAAACAATATGCCGGCTTCTTATTGAGAGGTTATGTTCACTGCAAAACTGTCTATC
ACTGATTTTAAAGTTTATTTAGCACTTTTATTATTTATAGGCTTTACTGGGCCCATAACC
(4740 bp)

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