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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14101_c0_seq4
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_UBR1-like_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0005737 C cytoplasm
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
Transcript
Level		FPKM:0.26 TPM:0.26
ORF EntryO_BomoSK18272_5prime_partial:A_BomoSK_comp14101_c0_seq4
Sequence
(Nucleotide)
AATGAACGCTGACAGTACATTGTTTACCTGCGCTTCAAACAGTTGTCCAGCGTTCATTAA
GAGTTTTTGGTTACCGTATTCGCGAATACAAATTCTTGTTTTTAGCCAACGATTCTCTAT
CAGTGTTTAGATGATCTCATTACGAACCTCATTCTCGTTAGGTATATTGTGCTTTATTTG
ATCATACAGGGAAGCAAATATAAATGAATATATCAGAACGAATAAACAGGAAGCAAGCCC
GTGTCTTGGGACCAAAAGTGGTGTACACGTTGCCGGCTCGCGCTGATGCTGTAGTGGAAC
TATGGCGGAAGAATCTGCAGGAGGGTGTACTGGCGCCCTCGCACTTTCAAGATCATTGGC
GCGTCACCGTTCCGAGAATATATTCGCCACAACCCAACAGAACATGTTTGGACTGGTCTT
TCGACGAGGAACTAGCTGCCAAATTGCTCATCCAACCCCTAGAACAGTTCATATGGGGTA
CAACAGAAGGATCTCAACCGGGTCCCCCTCGTCGCTCTACACTCTGCGGACGGGTGTTCA
AACAAGGCGAACCTGCATATAGTTGCAGAGAATGTGGCATGGATAACACTTGCGTACTCT
GCGTGGAGTGCTTCAAGGTATCAGCTCATAGACACCACAAGTACAAGATGGGGCAGTCCG
GTGGCGGCGGCTGCTGTGACTGCGGTGACGCCGAGGCCTGGAAACGGGATCCATTCTGTG
ATTTGCATGCTGCTCCAAGCGATCAACCGCCCGAGGCAGGCATAAGCGAGGATGTTATAA
GAAGAATGAAGATCGTAGCATCAGCTTGTTTGACTTATTGTCTAAGGCTGCTTACACACG
ATCACGCTCCATGCTTGCCGAACGATCTCAGATTGAAAGACACGGAGCGCGACATCCTGC
AGATACTGGACCAGCCGGATTGTTACTGCACGGTGCTCTACAACGACGAAACTCACACCT
TCGAGCAGGTGATAACAACGTTGATACGCGTGACGAAGTGCAACCACCGCGACTCCGTGG
AGCTGGTGAGCCTCATCGACCGCGAGGGTCGGGCGCTCATCAAGTGCAACTCGTTCCAGG
TCTGCGACAAACTCAAAACGGACATCGAGATCTGCACGGCGATGTTCGAAAGGTTCACGG
CGCGCCAGAGCTCCACGCTGAAGGTGCTGGTCATGCACGCGCACGTCATCGCGCACCAGA
CCTTCGCCATGAAGCTGCTCACCTGGCTTCAGAACTTCGTAAGCCAAGAGCAGAGTCTGC
GCATGGCCGTGTCCCACGTGGCGCTGGGCGAGGACATGTGGGGCTCGAGCACGGCGGTGG
GGGGCGGCGGGGTGGCCGTCGGCGTCATGCAGAACGACTTCCGCATGTGGAAGGCCGCCA
GGACCGCCTGGCATCGGCTGCTCATCGCCACCACGCTCATGGACTATTCTACGAAGAGAA
CCATGGCTATATTATTCACCAAAAATTATGGCTCAATACTGAAGGACTTCATACGAGACG
ACCACGACCACTCGTTCTCGATATCGTCGCTGTCGGTGCAGCTGTACACGACGCCGACGC
TGGCGCACCTGCTCATCGCGAAGCACGACGCGCTCTTCGTCGTGCTCAACACTTTTGTGA
GCGAGTGTAACCGACGCTGCAATAATGGTCGTCTAGAGTTCGATCGCAACCACGTGTCGG
TGGCGTACAAGCGCGCCCAGTTCGTGCTGTTCGACGTGAAGTACCTGCTGGGCTCCGTGC
CGGCGAGCTTCGACGACGACCTGCGGAAGGGTTTCCTGCACGGGCTCTCGTTGCTGCTCA
ACCTGTTCGTCATGATGCAAGGGATGGACTCGGTTGTTAGACAGGTGGGTCAGCACATGG
AATACGAGCCGGAGTGGGAGTCCGCGTTCAACTTGCACGTGAAGCTGGCGCAGTCCATCA
CCATGTCGCTGGAGTGGTGCGCGGCCGAGCGGCCCCTCACCGCCTCCGCCTACCGCATGG
CGCTGCGCCGCCACGCCGC
(1999 bp)

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