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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14101_c0_seq2
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_UBR1-like_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0005737 C cytoplasm
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
Transcript
Level		FPKM:1.04 TPM:1.04
ORF EntryO_BomoSK18262_5prime_partial:A_BomoSK_comp14101_c0_seq2
Sequence
(Nucleotide)
TTCCTTAAGTATATCTGTTTCTTTGAGTGTTGGACATTTTTTGTTTTTATTTCTCGTGAA
AAAGAAAAATGGTATTCGATCATTTTAATATAGATTTTGTGATTTCGTATTAAATATTCA
ATAGTTTGTTGTATTTATCATTAATCTGTGAACAAGAATGTTTTTATAGAGATCATTGCA
GTTCGATGTGCTGTGATGAAATGTCAAAATTTTCGTGGATTAGTGCCAGAGAAAATTCGA
TTTCATGAAAAATTGTGAATTAGACATAATCACGGATTACGACAAATTACTAATTTTTTT
CTAGTGTTTTAATTCTATTTACCTAATAGTGCAACATTTATGTTTGATGATTGTGCACAT
TTCACACTGAAGGGTCCATAACGACTGGTGAGAAGTGGAGATGAGTACTCCACCGCCAGT
GCAGCTGGAGGTCGAGGTTGGTGATGGCTCAATGGATGACGAGACCCCCGACATGATACC
CGCCGACAGGTACACGTTGCCGGCTCGCGCTGATGCTGTAGTGGAACTATGGCGGAAGAA
TCTGCAGGAGGGTGTACTGGCGCCCTCGCACTTTCAAGATCATTGGCGCGTCACCGTTCC
GAGAATATATTCGCCACAACCCAACAGAACATGTTTGGACTGGTCTTTCGACGAGGAACT
AGCTGCCAAATTGCTCATCCAACCCCTAGAACAGTTCATATGGGGTACAACAGAAGGATC
TCAACCGGGTCCCCCTCGTCGCTCTACACTCTGCGGACGGGTGTTCAAACAAGGCGAACC
TGCATATAGTTGCAGAGAATGTGGCATGGATAACACTTGCGTACTCTGCGTGGAGTGCTT
CAAGGTATCAGCTCATAGACACCACAAGTACAAGATGGGGCAGTCCGGTGGCGGCGGCTG
CTGTGACTGCGGTGACGCCGAGGCCTGGAAACGGGATCCATTCTGTGATTTGCATGCTGC
TCCAAGCGATCAACCGCCCGAGGCAGGCATAAGCGAGGATGTTATAAGAAGAATGAAGAT
CGTAGCATCAGCTTGTTTGACTTATTGTCTAAGGCTGCTTACACACGATCACGCTCCATG
CTTGCCGAACGATCTCAGATTGAAAGACACGGAGCGCGACATCCTGCAGATACTGGACCA
GCCGGATTGTTACTGCACGGTGCTCTACAACGACGAAACTCACACCTTCGAGCAGGTGAT
AACAACGTTGATACGCGTGACGAAGTGCAACCACCGCGACTCCGTGGAGCTGGTGAGCCT
CATCGACCGCGAGGGTCGGGCGCTCATCAAGTGCAACTCGTTCCAGGTCTGCGACAAACT
CAAAACGGACATCGAGATCTGCACGGCGATGTTCGAAAGGTTCACGGCGCGCCAGAGCTC
CACGCTGAAGGTGCTGGTCATGCACGCGCACGTCATCGCGCACCAGACCTTCGCCATGAA
GCTGCTCACCTGGCTTCAGAACTTCGTAAGCCAAGAGCAGAGTCTGCGCATGGCCGTGTC
CCACGTGGCGCTGGGCGAGGACATGTGGGGCTCGAGCACGGCGGTGGGGGGCGGCGGGGT
GGCCGTCGGCGTCATGCAGAACGACTTCCGCATGTGGAAGGCCGCCAGGACCGCCTGGCA
TCGGCTGCTCATCGCCACCACGCTCATGGACTATTCTACGAAGAGAACCATGGCTATATT
ATTCACCAAAAATTATGGCTCAATACTGAAGGACTTCATACGAGACGACCACGACCACTC
GTTCTCGATATCGTCGCTGTCGGTGCAGCTGTACACGACGCCGACGCTGGCGCACCTGCT
CATCGCGAAGCACGACGCGCTCTTCGTCGTGCTCAACACTTTTGTGAGCGAGTGTAACCG
ACGCTGCAATAATGGTCGTCTAGAGTTCGATCGCAACCACGTGTCGGTGGCGTACAAGCG
CGCCCAGTTCGTGCTGTTCGACGTGAAGTACCTGCTGGGCTCCGTGCCGGCGAGCTTCGA
CGACGACCTGCGGAAGGGTTTCCTGCACGGGCTCTCGTTGCTGCTCAACCTGTTCGTCAT
GATGCAAGGGATGGACTCGGTTGTTAGACAGGTGGGTCAGCACATGGAATACGAGCCGGA
GTGGGAGTCCGCGTTCAACTTGCACGTGAAGCTGGCGCAGTCCATCACCATGTCGCTGGA
GTGGTGCGCGGCCGAGCGGCCCCTCACCGCCTCCGCCTACCGCATGGCGCTGCGCCGCCA
CGCCGC
(2226 bp)

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