SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14074_c0_seq2
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_proto-oncogene_c-Fos_isoform_X2_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006094 P gluconeogenesis
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008284 P positive regulation of cell population proliferation
GO:0010628 P positive regulation of gene expression
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0034198 P cellular response to amino acid starvation
GO:0035914 P skeletal muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
GO:1903984 P positive regulation of TRAIL-activated apoptotic signaling pathway
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
GO:1990622 C CHOP-ATF3 complex
Transcript
Level		FPKM:1.52 TPM:1.53
ORF EntryO_BomoSK18055_complete:A_BomoSK_comp14074_c0_seq2
Sequence
(Nucleotide)
GATTTCCCTGACGGCTTCCGAGCGGCGGTGTGGCCGGCAAGCGCACGCATCCGACTCGTT
TATATCGCGCGGTACCGATTTCCCTGACGGCTTCCGAGCTGCATCAGCATATCTGGTGTT
TTCCTCACTACTCACCAATCGTCACAAGTGACAGACATACCGAAAACCGTCAGTCGGCTA
ACGTACATCGCGTACCATAGAGAAGTTTCAGCGCGGCTCATAAAAATTCGGTGTTTTCGA
CGGATGCGATGAATAAATTTTGCAAATCGAGTTTGTGTGTCGAAAAGGTCCGTGAGAGCA
ATGTTTTGATCGGCCGGCTGGAAGTGGAAGTGCCGGGTTGTGTGGACGCGATACGATTCG
CGATTATCTTGATCTGTGTGAAATTAAGGTTTTTTCGGGAGGTGCTCGACCGAGTCTTCC
ACAAGGAGGCGGCCTGGAGTCCAGCCACGGCGTCTCCGGTCAGCCCCGCGCTTAGCACGT
GCTAAGGTCTAATTACAAAAGTTACCCGTGAAGACTTCTGTTAGAGGAGACTTTCAAGTG
CCATTCGTACCCAGTTTACCAGACAGTGATTTAGTGATAGTGTTTACCCGTGATATTTAG
ACTTAGTCTAAAGTGTTAGTACCAATAATTTTGTTTGAAAAGTTACCAAAATAAAATAAA
ATAAAAAAACAACAAAACTGGCTCCTTACAAGGATATAATGAACGCAACGAGCATGAGCT
CTACTATACCGACAATTAAATGTGAGGATACATCGCCATCGCCGGTTGCTTTAGGATCTG
ACGGAGAAAGTGGAACGTACAATTTGAGTGTTAATGTGAATCTAAGTGCTGCTATGATAA
ACATGCTGACCGCCGAGGGAACAAATACTACGCTTCGTACGCCGGAGATTGTAAACGATG
TCATCACCATGACAAACCCCCTGGACCAGTATAATTACGAAAAGAATTCCAGTTTCAAGA
ACGGAAGCGGAAATGACTCCAACTCTTCGATGTCTAATGGCTCGTCGGCCACATCACCGT
CTTCAAGCACTCCGCCCAGCATACAGAAGACGTGCTCGGAACTTATCAAGGCTGGCCTGA
AACTGTCCATTGAATCGAAACGCAAAATGTCCGGTAGCGATACAGACGTCAGCGTGAAAC
GACTCAAAAAGGAAGAAAGCGATGAAGATTACGATAGCAGTCACACGCAACAAGCCAAAA
ATGAAGGGAACAACAGGACGACCGATAGCCATCAGGAACTGTGTGATCTACTTGACTCAA
TGTATACGGGAAAGCTAACACCGGAAGACGAAGAACGGAGGCGGCGTAGAAGAGAACGGA
ATAAAATCGCGGCTACAAAGTGCAGAATGAAGAAACGGGAGAGAACCGTCAACTTGGTCA
CGGAGAGCGAGGTCCTCGAAAACCAGAATATTGATCTCAAAGCACAACTGAAGGATTTGG
AAGTTCAGAAGCGGCAGTTGATTGACATGCTGTCGCTGCACGCCGCATCGTGTGTCAAGA
ACAATTCAACAACGAGGCAATCGCCTACAATGCAGTACAACATGATTCGTTCTTACGATT
CTCCATCAACATTCCCCTCTTCGTTTGAAGCACACTCGCCATACATCCGACCCGAGTCCG
CGAACATACTCGCATCAAGTTACACTTGCGCTACGCCGATAGGTGATTCTTCGGTGGACA
CGATTTCATCGCTGGACTCTATTTACCCGGCGCAGCAGTTGATTGAACAAGAATACAACA
GGCCCGACAGCGTCCTTAGCCTAACTCCAACCTCGGATCCCAATTTCGTGACCACAGACG
GGTTCCTGCCCAAAGCCACGAACCTCCTCATTCCGATTGACGCAGAGCAGGAATACTACG
ATCCTGATGTGAATTATAACTTGGCGAGCAATCAACAGTGCCATACTTATCCCGGATCGG
CTGCAGATGCACAGACTAAAATCAACAACGGCCTGAACGATGGGTGTCTCGTTTAGTTTC
GGACACATCCGTCGATCACAGTTCATTTTTGTCGGGTCCAAAATTTCTTTCGACACGTAT
ACGTATATTTTAAGCTTTGGATATAAAATTCGAAATAGAGTATCACCGTTTAATTGTAAT
TCGCCTTGTCTTCTTTTATATACTAAAAAGTGTCGCACGAAAAATCACATAATCTGGTAG
TGACGTGAATTGATCGTAAAATTTATATTTACCATTCATCAGTGTGTCATGTGCCGTAAA
TAAGTCATAATAGACGTTCTATTACATAGTTCATTAAAATTGTTGTCAATAAAACCGTTT
TATCTCGTAAATAACAAAAACATAAAAGTTAAATGGACGGAGAATTTATTTCGAAACGCA
TTCGTATGTCTACTGTGTAGAGCAACAATGTAGAGTTAGTGTGATGCCTGTTATAACTGC
GATTTTTTTGTCGTAAGAAATAAGATGTTTTTGTGTAAAATTCAAGGTGCTTCTAATTTC
AACACTAAAGCATTGAAATGAGATTTGTTTATTGTTAAAAAGCGTTGTGAGAAGTCACAT
TTACTGTCTTATAACATTCAGATGTGAACTGTGAAACAGTTCTTTAGGTAGGTCCATTAA
AATATATTATTTAGATGTTAAAACCTAACAATTACCATGTTTGTTTTAATTTCTTTCAAG
TTCTATAATTTTGCTTTGATTCGTTTTAAAATGTTTGGTTTTTGAAAGATCTGATTATTT
TTGTATGGTGCAATTTAGTGTACGAGTAGTTGGTGTTTTTTTTTTATCACTACCGATTTA
TGGAATATTAAATTTACTGCCTTCTATTGAAATCTTAGACGCATAACGTAGTTCTAGTCT
AAGGAAAATAAAGAAAAAAGAAACGCCCAAATCAAGGAATACATTTATAAAAATAGCATC
ACATAAATATTGTATATACATAGTTTAAATGTTTAGTACAAAAACATTTTGAATACCTCC
TGTTAAGATTCCAAATCGTAATAGTTTTGTTACAGATTCATATTATTTTATATTTTATAA
TTCCAGAATATAAATTCGTTATTGCATGTAAGATAGTTTATAGATTAAGGTGCTTTAACT
CAGGATAAATCGTGATATAATATTTGTTTTAAGCATTATAATGTTGATTACTAATTTATA
GAGGCGGTATCCATTATTACTTTTAAGATTCCATATTTTAATAAACTCGATTATGAATTA
TTGAAACAATTGTTATTCTTATACATCGTGAATGTGAAAGAAAGAAAGGACTGAATTTAA
TGGCCTTCATACATATATGTACAGTTGATACTTATATAGTTTTTCGAGCTTGCGATGTGC
AGTATCGAATTATCCCGCAAAACATTGTAAAATTTATATTTTGTTATGAAAGATAATACG
TTTACGTGTTACTTGTTTAACGATTTAACCCAAAAGATAGCAATCTAATATAAAGTCGTA
GACGTAATAATAAGGGTTTGTACGTTGTCTTCCTCGGGCAGATAATAAAACGAACAAAAA
TGAGTAAGACGAAAAGTCAGTTAAAAAAAAATGAGAATTCAGGATTCGATCCCTGAAACG
TGCCTTTGCAACCAGTGATCCTAGTCCATGCGGCCTTACCATCGTAGCGTACGGTCAGTC
GCGTTAGCATTTATTTTTGTACTGTTGGTCTTGTTGTTGTGATAAAAATACATTATTTAT
TAACGCAGAGCACAATAACTTTGTTATTTCTTGTACAACAAGATTGCAGAGTCTCCCATG
TTTATGTAACATGAATCCATACATAATAAGGACATTTGTTGACGCTTTTAAGACATAGTT
CTACCGAAAATTTGGCGCTGATATATTATGTTATCGGATTTAAATTTTGACTTGTATAAA
TCACCATGCCTGTAATTCAGACATATATTAAGACATCAACCTAAGATAGCCTTTTTCTTT
CAAAAATCGACACGATAACGATTAATAGGCATATAGTCTCATCACGTAGTATGAAGTGTC
TTAAGATATTAGACATTTTTTTCGTAAATTGTCATTGGATTATCGTGTCGGTATTATCGT
TCTACACTTCTGTAGTTGTACTGTTTTGTCGGTCTATGTTGCAAACTTGTAAGGGACTGA
TTTGTCTATGTCCATTGAAATTTCTAGAAGTTATTAGCTTTTGTTGTTTGATTGTACCGT
CGTAGTAATCTTATGTTTAAGATTAACTTTAGAAGGTATAGTTTCGGAATATGAAGAATG
GTTACTTTGTTTTTTAATCCATCACTATTGTTCGTAACTTGAAATCAATGTGTTATTTTT
CCTAATTTCATTACTGTTAAAGACTTATTGAATGAAATATGTGTTTCATATGAATGTCGA
TCACAAGTTCCCTGTATTTTTAATTTTCCTATTTTTTGAGGAATTTCATAAATACATTAT
AATTTGGTTGTAAGAAGTAAAGATTTAGTATTATCCACCATTTATTTAACGATTGTTATT
AAATAGTTAAGATTTTACCATTCTGTATCTATAATCTTCAACTTATATTACGTTGTTAAG
TCTTTTTATTACTACGCTGTACTAACTACGCTTTGATTTTTATAAATTTAGGTAACTACG
AAATTTTTTTGAAATGTTATGTCACAAAGTGATTTCTGTATTAACTTATTCGGCTGTCTG
TTATTGGTATAAACGTTAAATTTCATAAAATGTTGGAAGATAGTTTACGTAAGTGTTGTA
AACATTATTTGTACCTGCTTCTTGAATACTTACCTAATTATATAGATATTTTGACAGTCA
AAGCAAAATTATTGTGCTTATATATCGAGA
(4770 bp)

- SilkBase 1999-2023 -