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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14073_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_tyrosine-protein_phosphatase_non-receptor_type_23_[Papilio_polytes]
Ontology
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006470 P protein dephosphorylation
GO:0006810 P transport
GO:0010633 P negative regulation of epithelial cell migration
GO:0015031 P protein transport
GO:0016023 C cytoplasmic vesicle
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019901 F protein kinase binding
GO:0030030 P cell projection organization
GO:0030334 P regulation of cell migration
GO:0031410 C cytoplasmic vesicle
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0036064 C ciliary basal body
GO:0042995 C cell projection
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0060271 P cilium assembly
GO:0070062 C extracellular exosome
GO:1903387 P positive regulation of homophilic cell adhesion
GO:1903393 P positive regulation of adherens junction organization
GO:2000643 P positive regulation of early endosome to late endosome transport
Transcript
Level		FPKM:0.38 TPM:0.38
ORF EntryO_BomoSK18044_complete:A_BomoSK_comp14073_c0_seq1
Sequence
(Nucleotide)
GGAAAAAAGAAAGTAAATAATCTCCGCAACTGATAGTTTGATAAAATTGTTTGTGATGAA
ATTGTCGTTCAAGTGAAATTTCCTTAACTACGTTTCTAATCGAAGTTAGCTTCCATTAAT
TATGGAAGCGGTACCGAAGATACCCCTTATCAGTTTCGAATTAAAAGTATCAACAGAGAA
TACAAAATTTGGAACAAAACTTAAACAGTACATTGCCGAAGTTTATAAAGAAGATCCAGA
AAGCTACAGTAATGAGATTCATTCGCTCGAAGGGCTACGATCGGCCGCCGTGAGGCCTAC
AATGGATACGGCAGGCTTGAAATCTTTAATTAGATATTTTTGCCAACTTCGTGCCATGCA
AAGCCGATTCCCAATGAGCAAAGGCCAGCCGGCGGCTTGCAATTTCACTTGGAAGGATCT
CTACGCAAGCATGAATTGTACCTCAGCATCTGCTAGGTTTGAATTAGGATGTATTCTTTA
CAATATTGGTGCCCTAAATACCGAACTTGGTGCAATGGAGCCACGTACCACAGCTGAAAG
CCTGAAAGCCACTTGCACTCACTTCCAGCATGCTGCATACTCATTTCAACTCTTGAGAGA
GCAATTTACTCAACCTCCAGGAGCAGTAGCAATACAAGTTGTTTTATTCTGCAAAAATGC
TCTGGCTTTACTTGGACCGTCCACTGGTTCAGAAAATGTTTATGAAGTTGTTGGTATAAC
CCTGTACAACTATTGGTATCGGTCCCTTTCTTTTAAAATGTCATTTGTTGGATCTATTGC
CTGTCTGTATCAAGGAATGCATGCTGAAGAGCAGCAGAAAATGGGTGAGAGAGTTGCCTT
TTATCAACTGGCAGCTGAAAAACTGGCAGAAGCCAGGAAAATTGCCAAAAACATGGACTC
CAACAAGGTGATTTTGGAAGCTTTGAACTTTATGAACGACGTTATCGAAGGCAAAAAGAA
AGCAGCCAAGAATGAAAATGAATTTATTTATCATGAGGAGGTACCTGACAAGGACATGTT
AACGGAACTAAAACCAGTGTGTTTGGTGAAACCATTGCCAATTAACTTTAATGATCCTGA
GTTGTCAGGTTCGGACCTATTCGCTCGCCTAGTGCCGATCGCGGCACACGAGGTGTCCTC
GGTGTACTCCGAGCAGAAGGCGAAGCTGCTGCGGCACGTGATGACCCAGATCGACGCCAA
GAACACCGAGCTAACGGAGTTTATGTCGTCACTGCAACTCGATCAGCTCGATGTGCTGGA
TTCGGAACAAAAGGTGCCTCAAGATATAGTCGACCGGTGTGCGGCGATGAATGCCAAGTC
GGAAATAATACAGTCACTAGTTGATTCGATGAACAGTCTGGCCGAAACTATCAGCGACGT
GGAACACTCGTTGGGAGAAATAAAAAATCTCATACAGGAGGAAACAATGAAAGAGAAAGA
ATTCCAAAAGTTAATGGGTCCACGACCGCCATCTATCGTTCAAACAGAACTGTCCCGGGA
ATACCACAAGTACCAAGAAGCACACACAAGGACCAACGAGAGCAACCAAGTGTTGCACAA
GGCCATGACGCTACACATCGCCAACCTCAAACTGTTGGCCCAACCTTTGGACGTGCTGCA
AGAGAAGATACCAAGCATTGACAATATTGAAGGTCTGGACCGCGAGACGATGTCGGAGAT
GCGTCGCGTGGTGGGCAAGGCTCGCGAGATGCAGGCGCAGCGGGACGCGCTGGTGCAGCA
GCTGCGGGACGCCGTGGCCGCCGACGACGTCACCGCCCTGCTGCTCGTCACCAACGAGCC
GCCCGAGGACCTCTTCAAACGAGAAATCGAAAAACACGCGCCCACGGTAAAGATCCTCGA
ACAGAATTTGGGAGCTCAAGAGAATATTATAAACAAGCTAACGTCGTTGTACGCGTCGTA
CGGAGACTCGCGGCGTCTGCTGTCCGAGGTGCTGAGGAAACGAGATGGCCTCATCAACGC
ATTAGTGACGTCATACGACACGTACGAGGAGTTGCTGGGCAAGTCCCAGAAAGGCCAGGA
GTTCTACAAGAAGCTATCGCACAACGTGAACCAGCTGCTGTCCAGACTGAAGAGCACGTG
TCAGGTGCAGGAGGAGGAGCGCGCGCAGCTGCTCTCCAAACAGAACACTAAAGCTGTGAC
GTCAGCGCCAGGCCCGGCCGTGCCCGCCGCGGCGGCGCCCAAAGTCCCAGACGTGGCCGG
CCTGCCGCCCACCGGAGCGCCCCGGAAGCTGAAGGACTACCTGCCTTATATGAAGAACAG
GAGCAATCCTAGAAACACAGCCCCTCCAGTTCAAATGGAAGCCTTCCCGCCAGACACGTA
CTATCCGGAAACGATGTACCTCCCCTCCGTAAGACCGGCGCCTGTTGGCTCTGAGGCTAC
AGACGTGGCACAGATGCAGCTCCCCGACGGAGTTCTGATGTCTCAAGCTCAGAACACTTC
ATTCACCGACCGTTACAACCCTAACGTCATGCCCGAAACCTCTTATGCCCAGAACTATGC
CTACCCGGCCGCCGAGAAACCCTACGACAAGGATAACTCCGCGTACAATCCGCACACGCA
ACAATATCCGCCTCAGATACCAGACCCGCAGCAAGTGTATACCGGCCCTTATTACAGCAC
GCCCCAGAACAGCGCCGCGTCCGTGTCGGAGCCGCAATCCGTGCAATATAGCAACCAACC
ACCCAACATGAACACGAATCCAAATATTCAATATCCAGTCTACAATGACCCTTACGCGCA
GAATGTTCAGTCTGTGGCCTCGAGTCACGGCTCCAATACTTACGCTTCTGCTAATCAGGC
GTATGCGAATAACCAGACAGATTTGAATGTGAATTTTGCACAAATGCATATAAACGCTCC
AAAGTCTGAACCGTCTGTAGATCCCTCGCACGGTTACTACATGCAGTACCCGCAATCGTC
CACGCCCAGTGTTGCGTATAACGCCGGTTTGAACACGGGCGTGCCCGCTCCTGGGTCACA
GCTCCCGACGGACTACAGCTCCCTTAGTTACCAATACAGTACCGAGTCGGTCCAGTACAG
CGTCAGCGCACCCTACAGTGTGCCGGAACAACCGTACAGTTACGTCACGAGCTCGCTCGA
CAGCGCGTCCCAACACTACGCGACGCAAACGATCGCGACCGGTGCGAACACGTCGACGAC
AAACGTCACTAGCACAGTGACGTCACTGCCTTACACGTACCCACCCGAGGCTGAGGTATA
CAACCCCGCTTTAGCGCAGATGGACGCGTTCGATAAACCGATCAAATCGCACGTGACGGG
CGAAGCTCTCTCGTCTAGTTTCCAGTCGAACTATAACACACAGAATTACAGCAATATTCA
GAATTACCAAAATCCAAACGTGCAAAGCTACCAGCCGACGAGCACCTACGAGGACCAAAG
CAAAGTTAATTACGGCCAGACCTACCAAAATCATCCGGGCTATACACTCAACCAGGCTAC
CGGTAATTACGAATACAATTACGGTTCGCAAAACTCGTACGCAAACCACCAAGGGAATGT
GGACCCTCAGACCGTGCACAACGACTCGAATTGGGCCGGACAGCGCTACACCAGCGCCGG
CGGATGCCACACCGTGCAGTCCCCCTCTGAAACGCAAGTCCCCCAAGCACCGACCCAAGA
ACAGAACAGCAATCAGTATTACAACGCGCCGTACGGGTACATAACGACCACTAACCAGTC
GAATGAAATGGTCGCCACTCCGCAAACGATCGGGACCAACTATGGCGCCAACGTCAATCA
GTCGACTTACATGCAGTCCGGTCAAGGTCACGATACCAGCGTTACATTTACCAGTAATCA
AGTTTTTTCGCAAAAAGAGAATGATGTTCAGTCGACTGAACAAAATGGAGTGTCGACTGA
ATCGCGTGATACAATGGAGGCGCTGCAGGCTCCGCAGAGTAACGACGTCTCGGTCCAAGA
AACTGTTCCAACACCGGTACAGACTACAGAACAAGTTGCGGAGAATCCGATCGAGGAAAT
CGAGCCAAAGCCGGAAATTTCCGTATTCGATCTTCTATCGGACATAGATTTTACGGTTGA
ACAAAAACCGTTGATGCCCGAGATAAAAGTGCCACAAATATCCGAAAGTGCCATACGGAA
GCAAGTGCTACCTAAACCAGAGCCAGCGAAGGCTCCCAAAGAAGAGGCGCTTGTCCGACC
GGCCAAGAGAGATATCTTCTCGGACCCCAGTCTACTCAACCAGTTCACGCAGGAAGTGAA
GAACTTGCAGAGACTGGTGGATTCGCTGACCAACAGAACTCCCAGTGGACTGACGCTATT
GGATTCGAAATGGAAAATGTATCAAGATGTACAACTGAAGGAAAACATGACTAGGTCTAA
AACGATAGCGATGAAACACAGCCGCGGGAACATTGTGACGGAGGTGGTGCCCTTCGACGA
CTCGCGCCTGACGCTCAAGTCCGACCCTGACGCTTACATAAACGCCTCTCATTACAAGCA
ATTAGCCTCATGGTGTATACCCTTAGTGATCTCTAAAAATCCAAGTGAAGATGAATATGG
AATCTTCTGGAAGTCAGTATTAGAAAATAAAATCAGTTGCATCGTGTGTTTACTGAGTGA
GATTGAGCTGCAAGGAAAGTCGTACTGGCCGACGGCCAAGGGACAGTCTCTGGAGCTGTA
CGGTCTGAAGGTGCTGCTGGAAGAAGTGAACTGCACCGTGCACTGGACCGAGCGGAGGCT
GCGCGTCGCCGGCGGCAGCAGCGTGCACGCCGTCACGCACTACCAGATCAACGTGTTCCC
TGCCAAAATTGTTTGCTCACCCCTAGTGCTTCTGGTAGATAAAATTCTGAGTCAAACCTA
TGAAAATCGTCTGTGCAATCAACTGTGCGGCGCGTGGATACAGTGCGGCGCGGGAGCGGG
ACGCAGCGCCGTCGTCGCCGTTCTCGTTATGGTCATGTGCCAGGTGCGAGCGGGACAACT
AGATTTGTGCGATATGCTAGACGCCGGCTGTGTCAACTTGTACAAAGGTCGCGCGAACAT
TCTGGAAGACACGAAGTATCTAGCCGACGCGTACAGAACCGCGCTGTTTTACGTACAAGG
CGTACTTTGTTCTGGGACAACGAATTTCAACGGTGAAGCAGTTTCCGGACCAACAGGAGC
CTCCATCCTCCCTCCGGTCACTCCCACCCCTAACAACTCCAACTCCGCCACGCCGCAGAA
GAAATTCTCTCGGGAATCGTTCGAGGAGATGAAGCAAGCTCCCGGCCTCAAGAGCGGAGA
CATGAAAGACCCCCTCAACTTTTTGGATCCGCTGTGGAGCTTGAAGAAGAAATAAGACTG
TTTCTATATAGATTTTACTAAATTGTTTGCTATGCTATTGGTAGCTTTGTACGTGTCTCG
AGCGACGCGTCCATAGTATCCAATAGCTTGTACGATTCCAGATTAAAGTTAAATAAAGTT
TAAAGTAACGAAAACAGTTTCGAGACTAGAATCGAAATGGTTCAGTGGTCGGATATTTAT
ATTTACTGATTTTCTCACATCCAAGCAAAATATATTTATTTTAGATGTAACCTTAATATG
GTCAATATACAGAAGCTTAAATTAGACTGTGATTGAATATTAATAAAAATAATTACTAAT
TAACAACAAACGGATTAGTGAAATTCGTTTTTTTGAGTATTTGGTTCTGATTACAAGAAA
TAATGTGATTATAAAACTTAGGTTAGTCGACGTTATCTAAGAATCACTATGGCCATTTTC
CAAATATGTAGTGTAGAATATGCACTCGTTGAGCTAAAATGAACAAGCCGATGTTTTCTC
TCTCCGACAAAATCACCTCGTTTCCATGTGACGAAATATTCACCAATGTTGCCAACAATA
AAAAAAGAATGGATGATGAAAATGAAATACTATCACGAAATAAAAAAGTGATATACACAT
ATAAATAACGAACAACTCGATCGAATACGTGAAAATGTTATTTAATTTCTTTGATCAGTA
TTAATAGGTCACAGAAATATAGAAAAGTTAATAATAAAATGACGATGTTGCATTGAATAA
AAAAATTCGACTGATAATAAAATTAAAACGATAAAAAGTAAATGTAAAATTAGATAGAAC
TTTAGATATTATGAAAAATAAATGATATTATTTTTTTCCAAGGGAATTATATTTAATCTA
TACGTAAATATTACTAAAGACGTGTACGCAAAATGTGTAAATCATAAAATTACTTTTAAA
TTTGATAAAAACATATTATTCTATTATAAAAGAATACATATTAAACTATTGAAGTATTGA
AATTAAAGCATTTGTAAACAAAGTTTAAGTCTAACCCATAATTTTTTTGAATTGCAAATC
AGTTTTATTTTTAATATTTTAGTAATGATTCAGCTGTCAACCATGACAAGTTTGACAGCT
GTCAAGTCTATAGAGGATTTATGCGACAATCGCATATATAGGAAGTTCGCCCCGGGAGTC
AGCTCGCTAGGCTGTGACGGGTAGCACGTGATTACCCATCCTATGCGGGTGTTGTGAATA
CATTTTTAGGGTATAGTTCGTGGATACAGTTACTGGCGGTAGGACCTTTTGTGAGTCCGC
A
(6601 bp)

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