SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14071_c0_seq22
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_lys-63-specific_deubiquitinase_BRCC36-like_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000922 C spindle pole
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoSK17976_complete:A_BomoSK_comp14071_c0_seq22
Sequence
(Nucleotide)
CGTGTGCTCTTCCGATCTCCCCGGAATATGTATTATCTATGCTGTTTATTAGGAATTTAG
GAACAATGTTTAATTCTAAAAATATTAAAAAGTGTAACGTTTAACCGCATAACAATTACA
AATATAAATTTTGAAATGCTACAAAAGGTCCGTTTATCGTCTGATGTTGCTTTGGTCTGT
ATGCAACATGCGTTGTCGACAGAGAAAGAAGAAATCATGGGCTTACTTATAGGCGAGGTT
CATGATAATGGTGCACTTGTTTCAATAGTGTCATCAGTAATACTTCGCCGTTTGGATAAA
AAACCTGACCGTGTTGAAATATCAGAAGAACAACTGGTTCAAGCAACTGTTAGAGCTGAA
GAATTAGCTGCAGAAGTTGGCCAACCTCTTAGAGTTGTTGGATGGTACCATTCGCATCCT
CATATAACAGTGTGGCCATCCCATGTTGATTTGGCTACTCAATCAATGTATCAAAGGATG
GATGCTAGTTTTGTTGGAATTATTTTTGCAGTATTTCTTACAGACCAATCAACAAAGGCC
CCTTCAGTTCAAATTACTTGTTTTCAATCAATTAATGAAGGAGCTAGTCAAAGTCGGATT
GAAATAGAAATGGAAATTGTAACTAACACTGATTCTTTGTTAACAAACAATTTCGAGACA
CTAACTCAGCTTCCAACAATTTTAAAAGAGGAAGAAGATGAAGCCTTTAATAATGAAATT
AGTTATGATGATACTGATGACATTGTCACTAAGCAACATAATGCTGCAGTAAGGACTATT
GCTATTGGCCACATTGTTGATAAGATGTCCCGACCAATGCTAGAAGGTTTAGTGGCCAGA
AATTTATTAAACAGTATACGCTTAAAAGCATTGAAGAAACAGCATCAGCAGATGATGTCT
AAATTAGAAAATATGACATGCTTGACCTAAACTTGTTTCAAAGATTAAGTAAACCAATTA
ATAACTAAGTGAATTCATTTTTATCAATAATTTCAAATCCATCTGATGAATCTTTACTTG
ACATTCGTTTTCTTGTTGCTTCGTTTGTGGTCTTCATCATATTACTTAAAGCACCAGTAA
AATTCCATAATGTATTATAAGCACTGTTGGTCCATGTGTTTGGTTCGGATACTTCCAAGG
TTGTCTGTAGTTGTGGATCTTTCAGGTGTGGATCTAAACAGTTATAATAAACTAGTTAAA
TTTCTTCTCAATAAATGGGCGATATTTTTTTATGTCCTTTATATATAAGTTTTCATTTAT
TATTTTGTATTTATTGATGAAGAATAATTAATTTACGTTCTCAACATTAGTGTCATAAAT
GTATGTTGTTGTGGTGTGTGTGTATGACTTTGCACGTACTGTGTTTTTGTATGTATAATT
TTTTATTTATTTATTAATTGTATATATTTAAATTATTTGTAAAATGTCTATAAATTATAA
TACATTATATATTCTGGGATCAGAGCCAATAGAAAAAAATACATGCAAATTTGAAAGACA
AAAGTCCATCCAATCCAATATTATGTCTCTGATGTCGATCTGATGGTAGATTCTGAGATG
CACTGCTCTTGCTAGGGCTAGCGCTCGTATATATAAAAACAAACACCATACAATAGATTT
CTTACTTTGGCCGAATATTCCAACCAGGATGACCAGAGTAAAAAAATTTTTCATTTATAG
ATTGATTTGGTGTAAAATGTTTTTTTTATTAAATTTCATACTATTATTTCGTTAATTATT
CGCCCGTATAATTTTGGTGAGTGTTGACGTCTTGGATTCATGCTACCCTACACTTGTAAT
GCAAAATAACTATTACCAATAAAAATTATAATCTTACAATATTAATTAAAATCATTACCT
AGAGGTATATATTCATCTTCACTGGAGTCTGATGTTTCAATATCCTTTTCTAGTGTGTTT
ATTTTATCAACAGAGAAACTTGTATCAAGACTGCTGTTTTCAGAGCTATCGCTTGCTTCT
TCAAGTGGAATATCTTCTGGTTTCCAATAATCATAACTTTGCTTTTCATCAATTTGTTGT
TCAGCTTCAATCGTCAATAGTTGTATATCAACATCTGATATTTCAGGAATTAGACCCTCA
AGCTCGCTCTCAGACTCTGAAAGTTAGGAAATATAATTCATTCAACAATAATTAATAACT
ACTTGCAAAGGTGCCTCTAGTCCATGCAGAGCCTGTAGGCATCATTACTCTAGTGCACTC
TAGTAGATACGCAATCAAAATGGAATAGGTACAAATGTAAATTTAAGCCACTTTTTGCTA
CTGGAGTTCTCTACGCAGTTTTAAACCTGCAAGGCATTTCATTGAATCTCTTTACCTTTT
ATGTTCATTTGGTGTAGTTTATGTTTATTCTTACGGGACAGTTAAATTATATTACTTATA
AAAAAAAAGGTTTTTAAATTAAACTTGCCTAAATCCTGTTGAATATTTTTGAAGATTTTT
ATAACTGGATATATAACTTTGTGTGAAAGACACACAAACAAACACATTGAATATATTAGC
ATGTAACCATTTACATACTTTCCAATGAAGAAAATGCATCCCAGTATTATGTTGGCCAGC
AAAAATGCTTTGGTATGATTAGTTTGCCTTATATAAATGAATTCACACCATTTATTTACA
AACCAATCTTTTAACTGTTTTGTGGCTAATATTATTTTTTTTCCATTGTAGGTTGAAAGT
CTTTCCAAACACGCAGTTCTGTGTTTGTATTTTAACCAAGCTTCAAATCCATCCAAACAA
AGCAATGTGATGCACAGGCATATCATAAATTTTATAAAATTTATTTGGTGGTATACACAT
ACTCTGTAACAATCGAATTGTGAATACATGTTTTAATGTAAGCCATTTTTTAACACGGCT
AAACGAAAAGTCGTATAAAAAAGTAATGTATTTTTTACTTACAAAAATATTACGCTCTTG
ATTATTATAAATGATACGGACAGCCAAATTTGTTTCCATAGAATTATATCTTCAAATAAA
CCAATAAAAGCTGGTAATATAACGTACGATTGATTCGTTAGATTTTCTTGGCATTTTGCT
AATTTAGCCCATGCCAACCTTTTTTTTAATGAAGCTAACATTACTAATCGCTTAAATAGC
TTTTATTAAAAATAAACATTAATTTATTGAGTTATATGTATCTATAATTTCGAACACTTT
CTTCTATTAAAGGATATGTATATTTTGAAAACAAAATAAACAATTATGAGTAAGAC
(3236 bp)

- SilkBase 1999-2023 -