SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14055_c0_seq4
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_protein_Dr1_[Papilio_machaon]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0003677 F DNA binding
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0016573 P histone acetylation
GO:0042766 P nucleosome mobilization
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0051123 P RNA polymerase II preinitiation complex assembly
Transcript
Level		FPKM:13.65 TPM:13.73
ORF EntryO_BomoSK17785_5prime_partial:A_BomoSK_comp14055_c0_seq4
Sequence
(Nucleotide)
TGCGGGATTCGAACACCGGTGCAGCGCTACATACGAATGCACCGGACATCTTATCCTTTA
GGCCACGACGATTTTGACTAAATAAAGGCAAAACATCCAGCTTAGTGAACTTTTAGAAGA
GACAGTGGTATACTTATTGTATAACCATGTATTAACTGGCATCATAGTTCATACACTTAA
TAATTGGAATTTCACTATGCACTCTCTTCAAATACGCCTCATTATATTATGGTTTTTAGG
TTACATACTATCAAGTTTTAGATTCATCTTTAGTTTGAGAGCGACATAGGATCTATAGAA
GTAATTTAAAATTTAGTGTGAAATTTTGTTCACATTAAGTAAATTTAAATTAAATACATG
ACACAAACAACATTTATATTATAACACAGCCAGAAACAAAACTGTCATAATATTAAACAA
TAACCTAATTAAATGTTTCTTATGAGTAATCATCATCTTCATCATCATCAGTTCTTGGAG
CAGTTGTAGGTGGTACATATGGTTGTGCATTTCCTTCAACACCAACAAGTCCTTGTTGTT
GTAGTAAAAGCCACTGTTGCTGTTCTTGTTTTGCTTGTTCCTCACGGGCCTTTGCAAACA
GTTCTTGTTGTTGTCTCAATAATTCTTCTTCTGGAATGCCTAAATTCTCAAGGCGTGTGC
TTTGTCGTCTTCTTTTAGCCGCCACTGCTTTACAATCTTTTAAGACAGCTTCTGCTTCTA
TTGTGTAGTCACTAAATCCTAATCTGTCTAGGGCTGTAAGGACATGTTCTGCATTAATTG
TTTTCTTATTGCTTTGATTACATACTTCATTGGCTTCAGAACTAATCAAATGTATGAATT
CAGTGCAGCAATTTAGGATTAACTCCCTTGACTCGAACGCTACACGAACAGAAGGCACTA
ACTCTTTTATCATTTTATTTATACTAGCTCTTGGTAGAGTCAGTTCGTCCTCTTCTGAAG
GTGGTGGACAAAGTTCACGCTCTGGACTTCCCATGGTAACGAATTTATGAACGCCCACTT
CTATTTTTTTGTGGTAGCCTTTGGGCCACTTTGGGCCATTAAGTGTATAATCTATGCTTT
GGGCCACTTTGACTCTTTTTTTAAGAGATTTTATGACC
(1118 bp)

- SilkBase 1999-2023 -