SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14037_c3_seq1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		Inhibitor_of_nuclear_factor_kappa_B_kinase_beta_subunit_[Operophtera_brumata]
Ontology
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0007252 P I-kappaB phosphorylation
GO:0008384 F IkappaB kinase activity
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019901 F protein kinase binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0035509 P negative regulation of myosin-light-chain-phosphatase activity
GO:0042325 P regulation of phosphorylation
GO:0042501 P serine phosphorylation of STAT protein
GO:0042803 F protein homodimerization activity
GO:0045121 C membrane raft
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0070498 P interleukin-1-mediated signaling pathway
GO:0071356 P cellular response to tumor necrosis factor
GO:0090002 P protein localization to plasma membrane
GO:0097110 F scaffold protein binding
GO:1903140 P regulation of establishment of endothelial barrier
GO:1903347 P negative regulation of bicellular tight junction assembly
Transcript
Level		FPKM:5.80 TPM:5.84
ORF EntryO_BomoSK17600_complete:A_BomoSK_comp14037_c3_seq1
Sequence
(Nucleotide)
ACTTCATTTCATTTCATTTCAATTCCATTTTCATTTAGCAAATAATGAAATAATAAATGG
AGATTTGGCTAAAGGACTAAAATCCAGGCCATAAAACATATACATATATACATATATATT
ATAGATAAAAATTGATCATTTCTTAATTTTGTTAGAGGTACAATTTTTTGTGTATATAAT
TTGCCTAACATAATGTACACCTAACATAGAATGTGCTGTTTCAGCAATATTTTTTGGATA
AAAGTATTCACATTCATATATACTATTCTTTACATTCATTAAGAAAACTAAAATCAAAAA
TTGTAGTTTTTAACAATTCTCTCTGTGAATTTACCTCAGCAGACAAATTTACTTGATTCA
ATCGTAATTTTAAACTATCTTCTATTAGAGATTTCAATTTATCATCATTTGGTATTGTAG
TTTTTAATTTCTGGCAGTGTTTTGAAACTGGTCCACCAATTTTGAAGTCTTTTTTTTCAA
AAGACACCACACTGTATGGAATATCTGCCAAGTTATCCCCATCACTAACTGCCAAGTTTA
TGGTGGACCATATACAATTATTCAGGTCATCAATGTAATCACTGAGGTCTTTGGTTAATT
TTTCTGTGTTTTCTGCAGCCTTGGTCACAATGTCGGATATCTTGGAAAATTCAGTACCCA
AATCCATCAGCTTCACAACAAAGGGCTGGTGATGAATTTCAAGCAATATTTTACTTCTCA
ATTTGAGACAGTTGTAGCAAATTTTCATAATGTCATCACAGTGTTTTTCTTTTCCGATAA
TTTCACTTTTCCTTGCCATAATGTATATTTTGAATGCATTGGCATAAACTGCTTGGTAAT
TATATTTGGCTACAAAGTTTTTTATATCATCTGACACAATTTCATTACAACGTCGTTTAG
CAGATGTGAGTCTAACAGACAATTGATTCCAGGCTTGTTGGAGTTTACTGATTTTTAGGA
AATGCTCATCTGTGTCTTGGAATGTTTTGTTGAAACCTCCAAGCATGTTTATGCCCTTTC
CACTGTCTCTTAATTTGTTTACTTGCTCCTTACCAGTTTCAATCAGCCTTTTCATTATTT
CTTCCTTTGCTAGAAGATTACTTATACTTTTATCAACTGCATTATGTTTTAGTAGCAATT
GTTTGCCCTCATTTTTTAGTGATTCGCCTCTAACAAGTAACCCATTAATGAGTGATTCAT
AAATTTCAGATTGATTCTTTACAAAATACAAGCTATTCTTATATAAAGTTTGGCTATTTT
TGTGATTGTACAAAGCTTTAGGATGCTCCAAGCATCTTTGTACTGATTTTGGCACTTCTG
GTTCTATGTTCTTCTGAAGAATGTATGTTTTATTGAACAAGTATACCATTGTGTTACAGT
GTTCTCTCCAATAGTTTGACACAATGTCCATTTCTCCAAGTTCTGTAAAAGTATTTGGAC
ATATCAAGATTAAGTCTGCTATATCCATACTTGTATCTTGCCCAATCCATTTCTTCAAAT
CAGAAACCATTGTAGTATCATTGATTTGGTATGCTAGTCGTGACAGAGTAGGTACAGAAA
ATATTTTTATTATCTTCCGAGATAAAATATTTTCCAGTAGGTCATAAATGATGATGTTAC
TGCTTACTTCTCTTTGCTCAGTAGGAATATTAAATCTGACTCTTGTATGAGAATCTCTGC
CTCTCAGTTTAGGATCCCATTCCAGAGCTATTCTAAGCCAATCTTCCATTAATACTTTAA
AAGGTGCTGACATATGATTTTCAGGAAATATATTGTTTGAATATTCAATATCTCCATGAA
AAGTTTCATAAACACAAATATTTTCATGTGTTTTCTTTTCAACGTGAGGCATCCACTGTG
CAGGAGACATGAATGGAAGGAAAGGCCTTTTCCCACAAATTATTTCAAAAGCAAGCAAAC
CAAATGACCAAAAGTCAACAGAATTGCTATATGTTTTACTGTACAGTAGCTCTGGTGCTA
AATATTGAAGAGTACCAACAAAGCTGGCACACACGGAATTAAAGTCAATCTCCTTCGCAT
AACCTAGATCTATCAGTTTGTATATGACTCTTGGTTCAGTTTGAGGAGAAATATTGTTTT
GCTCTGTATTCTCTACAATATTCATAACAATATTTTCTGGTTTTAGATCACGGTGAGTTA
TTTTCTTTTGATGTAAGAACTTCATTGCATTTCTGATATCGCTGAGAATCTGACGAACTT
GTATTTCTCGCAGTCCAGAACATGATTCGGGTTTATTCAATTGCTGCCTAAGATCACCTC
CGCTGCAGTATTCCATACACATTATAGGTAGACCTGAAGGATTGCCTCGCTCTAAGCCCT
TTATAAATTCAGATGGAAGGGGTTTCGATCCAACGATGTTTGGATTTCGGCAGCTTTGCA
ACATTTCAACCTCCTTCGTCCACCTGTCTCTGTGTTTGTCAGTGAGTTCATCGCCCCATT
TACAAGTTTTGATGGCGAGTTTCTCTTCGGTCTTTTTATGTTTCCACAGCACTACTGTCC
CAAAGCTGCCTGATCCCAGTACTCTGTCTTTAATCCAATCGCCAACGAACACTATATCGT
TCATTTTACTGCTTTAAAATTAATATTACTTTTAATTTAAACATGAAGCACTTACGATAA
AAGTATATTATAGGCGTAGCTTTTGTATTTTACAATTTATTTACGAATCTACAATAATTG
CTCGTACCTATTTAAATAAGTGTAAAATTCACTTAAATATTGTATACAAAAATTACAAAA
ATAGATTTTTTT
(2772 bp)

- SilkBase 1999-2023 -