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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14026_c0_seq2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		putative_ATP-dependent_RNA_helicase_DDX5_[Papilio_xuthus]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009791 P post-embryonic development
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030331 F estrogen receptor binding
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0044822 F RNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0072358 P circulatory system development
GO:2001014 P regulation of skeletal muscle cell differentiation
Transcript
Level		FPKM:4.32 TPM:4.34
ORF EntryO_BomoSK17545_complete:A_BomoSK_comp14026_c0_seq2
Sequence
(Nucleotide)
TTTGACTTATGTGCTTTAGTCTGCTGACCCTAGAATTAGTACCGTCTTTAATAAACGGTG
CATCTTGTGCACTATGAAATGTAGTAGGTAAAAAATTATCCCTACATCTACTCATTACAA
AAAATGTTTATTATACACTATATTTTATGATATTAAAACTTATCAGCAAACAAATCAAGC
GAATGTCAACAGACAAACATGTAAACCATCACTTTGCACCAATCTAGTGTGAGCAAGCGA
AGAAAACCTAGTCAATCTTAGTACTTATCAATTTGAACTGACAAAACCGAGCGAATGCTA
GCAAATCCCATAGTCCTTAATTCATTTTCAACCCTTGTCCGCTAAGATTGACTAACAAGT
GCACATGTGTCTCGGATGTTCAGTTTGTACGGCTAGCAGAACTTGTGAGAACATTCGTTC
TCATCAAAAATTCTTAGCCTCTATTTCTTAACTTGCTTACATTGGATTTATGCACATTTT
TAGTTGTGATTTAAAGTAATATGATTTGAAAACAAACAATTTTTTTTAAATTCAATTGAA
TATCTTACCGCAAGTTTTTATATTTTATTGAAATGCACTTTACCAGCATGTATTGGAGTT
TATTTGTGTCCTCCATGCAAGTAGCATCAGTAGGGTTGCCAAGTGATCATTATTGCACTT
TTCAATATTTGTCAAATAATAAACTGTTTAATATGATGTATTTTAAGTTCTTATTTCATA
ATCATTATTTATATTTAGTAAACGATGTATTTAAATTACCGTCAAATTTAAAATGTAAGA
GACCACATATTGTAATAAATGTGCACAATATTTAATCTATTAAAGTAGATTATTCATTGA
TGTTTCGCAGCCTTATGCATAAGACTATTTGATTTAGACTGGCTGTTGGGCTTTAAGCTA
ATAAATATTGCATTTTTCTAATAAATTTCGGAATTTGCCAAATGATAGATTTAATTACTT
ATAGAGCCGCTCCACATATTACACTAGAATCATGGTATATAGTGTCCTAGATCCACAAAA
ATATGTGAATCAGTTCCACGTTCATTATTAAGGTGTTGTTCTCCCTAATCTCCCATGAAA
GTGCAACTGCCCTAACAATAAGACAAGCACATTAAAAATTTTAAATTACTGGATTAAATT
TTTTAGTCTTCAAAAATGCAGATTCGTTTTCTATCTTTTTTTAGATCAATATGTGCAAAT
GTTCACAAAATTATTATGGATATGATACAATCATGGAATGAAACAATAATGAATAAACCA
GATTAGGTCGTGCAAGGCGTGTTGCGATGTTTATCGTCTTCTTCGTCGACGGGAATCACC
ATTGTGACCGTTTTCTCCAAAGTTCACCGTCGGCGATTCCTCTGGCGGTCATTATACCCC
ATGGAGCCATTCGCCTGCGCATCGCTCAGTCCTGGCTGCAACATGCTGTAAGGTCTGTCA
GGTCCAGAGTTTTGTTGCTCATAATATTGTATGGGTCCATTTTGTTCATCATTATTGTAA
CCTTCATTACCTTCTTCATTTAAATGTTTATTTTTGGGTCCATAAGAACCAAAAGCAGTG
AAGTTGGCGCCATTTGACCTATTATCAGCACCATTTTGAGGGAGCATGCGCGGCAGTAGG
CTCCCATGGGGTACACCAGGACCGCCAGAGAGACCGTAGCCAGAAGACTGGCCCAGGCCG
CCGCCCTCGGAGCCTCCGAGTCCATAAGACCCGAGGCCACCAGAGTTGAGACTGTCGGAG
TCACGGTTGTCATGATCACGTCCTCTTCCACGACGGCGCCTATCTCGGCCTCTAGACCGT
GGTCCAGAAGACTCGGAGCCAAGGCCCCCTCCGGAGCCAAGGCCTCCACCGGAACCGTTA
TCAGCTCCGAGACCTCCACCAGAGCCGAGACCTCCGCCGGAACCCAGCCCACCGCCAGTG
CCGAGCCCGCTGCTAGAGCCCAAGCCCCCTCCAGATCCCAAATTATTGCTTGAGCCGAGA
CCTCCACCAGAGGCGGGGGGGCCTGTAGAGCCGCTGCCCAAGCCGAGGCCGCCGGAACTA
GATCCATAGACTCCTCGTTTTCTGGAATCTAACTCAAGGCCACTTTGGCCTGAGCCTCTA
CCGTGAATCCCATTAGCCATATCGGATGGAGGTGGCGGAGGAGGAGGTGGAGGAGGCGCA
GACCAACCACCAGAAGACATCATAGGATTAGGGGCGAAGTTTGGTGGTAACATCATACCA
TATTGATCAGCAGGGAAAAAAGGAGGCATTACAAAAGGGGGATTATTCATAGGTGGTGGA
GGTATTGACATATTCATTTGGGGATTTAAGGCCATTAAAGGGGGTATCTGAGATGGAAGC
GGATGCTGTGGTTGGTGTTGGTTTTGATTTTGATTATTATTACCGTTACTACTATTAATA
CTCCCATTTTCAGTCATGTCTGTTCTATTAGTATATGGTAACTCGTTTTTGGAAGGTGGG
GTTGGTGGACATCTGTTATTAAACCTATCAGGGACGGGAAGTTGTGGGCCAATGGGAGTC
GGTAAGAGCGTTTTCGGTGTAGGTAACAATGCCTGAGGCGCCGGCTTCGGCGTGATTTCC
ACAGAATCCTTCACTGGACTGCACTTGCCTGAACGTGATCGACTACGAGATCGAGACCGG
GATCGGGAACGGCTTCTTGACGATCGGGAAGATTTGCTTCTGGACGACCTCGAAGAGCTA
TGGCGGCGGCGGCGTCGGTCTCGTGAACGCGATCGTGAGCGAGTACGACGTCTCCGCGAC
CTAGATCGAGACCGAGACCGTCTGCGACGATACCGACCACCTCGTCCGCGATGACGTCGC
CCACCGCCACCACCACCGCGTTGTTCGGAAAGTTCTTGCAATTTTGGATTTACAACTTGT
TTAGCTTCCTTCAATACAGAAATCAAATCTGAAGCCTTAGCAGCATTCGAAGGCGTAAAG
AAAGTGTATGCAGTTCCAGTTTTGTTTGTTCTTCCTGTTCTTCCAATCCGGTGAACATAA
TCTTCAGAGTTGCTAGGATAATCAAAATTGATGACAAATTTCACATCATCAACATCTAAT
CCTCTAGCTGCTACATCAGTTGCTACAAGAATAGGAGCTTTTCCACTACGAAAATCTTGA
AGCACCCAATCTCTTTCATTTTGTGATTTGTCACCATGAATACACACTGCTGGCCATCCG
TCACGTTTCATTTTTCTAGTTATATCATCAACGCGCCTTTTGGTTTCAATAAATATAATA
GTTTTATTTTCTTTTTCAGCCATGATTTCTTTTAATAGAGTACTCAGTTTGGTTTCTTTT
TCATACTCCATGCATACATCAATTATTTGTAATATATTATGGTTGGCAGCAAGTTGCAAA
GAACCAACATTAATTTGAAGATAGTCTTTAAGAAACTCTGAAGCCAAGCTTTGTACTTCT
CTAGGCCAAGTTGCTGACCACATGAGAGTTTGACGATCAGGCCTTATTTGCTCAATAATT
TTCCTTATTTGAGGTTCAAAACCCATGTCCAACATTCTATCAGCTTCATCAAGAACTAAG
TATGTACAACGTTTCAGATTTGTACGTCCACTTTCTAAGAAATCAAGCAATCTACCAGGT
GTTGCAATCACTATTTCTACACCTGCATCTAAATCTCTTGCTTGTGGTCCTTTAGGTGCA
CCTCCAAACAAACAAGTGTTGTGAATTTTTGATGTATTTGCAAATTTATCACAAACTTCT
TGTATTTGTTGGGCTAATTCTCTAGTGGGTGCCAGTACCAGTGCTATTGGTCCATCCCCT
CTACTGGACTTAGGTTGATTGTTAATATGTACAATTGCAGGCAATATATAGGAAAGAGTT
TTTCCAGAACCTGTTGATGCTATTCCTACCATGTCATGGCCACTAAGAGCAATAGGCCAA
CCTTGGGCTTGAATGGGTGTAGGCTTAGCAAACCCCATTTTATCTATTTCATCCATAACA
TAATCTGGAAAACCAGCCTCATCAAAAGTAAGTGTTGGTTTTGGTATATTTCGACCTTTC
AAAGTAATTTCATTTTCACTTCTCCAGGCTTCAACATCCGATTCAGGTCTCTTTTCAACG
TCTAAATGTGGGACATAAAAATCTTTCTTAAATGGTTTTAAACGACTCAAGTCCCACTTA
GGTTTCCGAAGGCTGGCTCCCGGGTTACTTCTGCGTCCACCACCGCCATAACCACCACCA
CCACCACCTGAGCCCAGTCCATAACGAGGGCTTCTGCTACGGCTGCGACTCCTACTTCGG
CTTCGAGATCGACTGCGACGCCTATCACGACTACGGTCCCTTCCGCGGCCCATTGTGTTT
TTAGCTATACAAACGATGATGCAAAACACCTAATTCTAATTATAATCTGATTTATTAAAT
GTAGGCACTTTTTTCTCGTAAATGTTGAACTTAGTGTTCAAACTTATTAGCGCACCGCTA
GACGAAACGATCTAAATGATCTCAACGAACTACAAAACAAGATGGCGA
(4488 bp)

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