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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14026_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_ATP-dependent_RNA_helicase_dbp2-like_[Amyelois_transitella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003712 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0030331 F estrogen receptor binding
GO:0043517 P positive regulation of DNA damage response, signal transduction by p53 class mediator
GO:0045667 P regulation of osteoblast differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048511 P rhythmic process
GO:0050681 F androgen receptor binding
GO:0060765 P regulation of androgen receptor signaling pathway
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
GO:2001014 P regulation of skeletal muscle cell differentiation
Transcript
Level		FPKM:1.74 TPM:1.75
ORF EntryO_BomoSK17542_complete:A_BomoSK_comp14026_c0_seq1
Sequence
(Nucleotide)
TTTGACTTATGTGCTTTAGTCTGCTGACCCTAGAATTAGTACCGTCTTTAATAAACGGTG
CATCTTGTGCACTATGAAATGTAGTAGGTAAAAAATTATCCCTACATCTACTCATTACAA
AAAATGTTTATTATACACTATATTTTATGATATTAAAACTTATCAGCAAACAAATCAAGC
GAATGTCAACAGACAAACATGTAAACCATCACTTTGCACCAATCTAGTGTGAGCAAGCGA
AGAAAACCTAGTCAATCTTAGTACTTATCAATTTGAACTGACAAAACCGAGCGAATGCTA
GCAAATCCCATAGTCCTTAATTCATTTTCAACCCTTGTCCGCTAAGATTGACTAACAAGT
GCACATGTGTCTCGGATGTTCAGTTTGTACGGCTAGCAGAACTTGTGAGAACATTCGTTC
TCATCAAAAATTCTTAGCCTCTATTTCTTAACTTGCTTACATTGGATTTATGCACATTTT
TAGTTGTGATTTAAAGTAATATGATTTGAAAACAAACAATTTTTTTTAAATTCAATTGAA
TATCTTACCGCAAGTTTTTATATTTTATTGAAATGCACTTTACCAGCATGTATTGGAGTT
TATTTGTGTCCTCCATGCAAGTAGCATCAGTAGGGTTGCCAAGTGATCATTATTGCACTT
TTCAATATTTGTCAAATAATAAACTGTTTAATATGATGTATTTTAAGTTCTTATTTCATA
ATCATTATTTATATTTAGTAAACGATGTATTTAAATTACCGTCAAATTTAAAATGTAAGA
GACCACATATTGTAATAAATGTGCACAATATTTAATCTATTAAAGTAGATTATTCATTGA
TGTTTCGCAGCCTTATGCATAAGACTATTTGATTTAGACTGGCTGTTGGGCTTTAAGCTA
ATAAATATTGCATTTTTCTAATAAATTTCGGAATTTGCCAAATGATAGATTTAATTACTT
ATAGAGCCGCTCCACATATTACACTAGAATCATGGTATATAGTGTCCTAGATCCACAAAA
ATATGTGAATCAGTTCCACGTTCATTATTAAGGTGTTGTTCTCCCTAATCTCCCATGAAA
GTGCAACTGCCCTAACAATAAGACAAGCACATTAAAAATTTTAAATTACTGGATTAAATT
TTTTAGTCTTCAAAAATGCAGATTCGTTTTCTATCTTTTTTTAGATCAATATGTGCAAAT
GTTCACAAAATTATTATGGATATGATACAATCATGGAATGAAACAATAATGAATAAACCA
GATTAGGTCGTGCAAGGCGTGTTGCGATGTTTATCGTCTTCTTCGTCGACGGGAATCACC
ATTGTGACCGTTTTCTCCAAAGTTCACCGTCGGCGATTCCTCTGGCGGTCATTATACCCC
ATGGAGCCATTCGCCTGCGCATCGCTCAGTCCTGGCTGCAACATGCTGTAAGGTCTGTCA
GGTCCAGAGTTTTGTTGCTCATAATATTGTATGGGTCCATTTTGTTCATCATTATTGTAA
CCTTCATTACCTTCTTCATTTAAATGTTTATTTTTGGGTCCATAAGAACCAAAAGCAGTG
AAGTTGGCGCCATTTGACCTATTATCAGCACCATTTTGAGGGAGCATGCGCGGCAGTAGG
CTCCCATGGGGTACACCAGGACCGCCAGAGAGACCGTAGCCAGAAGACTGGCCCAGGCCG
CCGCCCTCGGAGCCTCCGAGTCCATAAGACCCGAGGCCACCAGAGTTGAGACTGTCGGAG
TCACGGTTGTCATGATCACGTCCTCTTCCACGACGGCGCCTATCTCGGCCTCTAGACCGT
GGTCCAGAAGACTCGGAGCCAAGGCCCCCTCCGGAGCCAAGGCCTCCACCGGAACCGTTA
TCAGCTCCGAGACCTCCACCAGAGCCGAGACCTCCGCCGGAACCCAGCCCACCGCCAGTG
CCGAGCCCGCTGCTAGAGCCCAAGCCCCCTCCAGATCCCAAATTATTGCTTGAGCCGAGA
CCTCCACCAGAGGCGGGGGGGCCTGTAGAGCCGCTGCCCAAGCCGAGGCCGCCGGAACTA
GATCCATAGACTCCTCGTTTTCTGGAATCTAACTCAAGGCCACTTTGGCCTGAGCCTCTA
CCGTGAATCCCATTAGCCATATCGGATGGAGGTGGCGGAGGAGGAGGTGGAGGAGGCGCA
GACCAACCACCAGAAGACATCATAGGATTAGGGGCGAAGTTTGGTGGTAACATCATACCA
TATTGATCAGCAGGGAAAAAAGGAGGCATTACAAAAGGGGGATTATTCATAGGTGGTGGA
GGTATTGACATATTCATTTGGGGATTTAAGGCCATTAAAGGGGGTATCTGAGATGGAAGC
GGATGCTGTGGTTGGTGTTGGTTTTGATTTTGATTATTATTACCGTTACTACTATTAATA
CTCCCATTTTCAGTCATGTCTGTTCTATTAGTATATGGTAACTCGTTTTTGGAAGGTGGG
GTTGGTGGACATCTGTTATTAAACCTATCAGGGACGGGAAGTTGTGGGCCAATGGGAGTC
GGTAAGAGCGTTTTCGGTGTAGGTAACAATGCCTGAGGCGCCGGCTTCGGCGTGATTTCC
ACAGAATCCTTCACTGGACTGCACTTGCCTGAACGTGATCGACTACGAGATCGAGACCGG
GATCGGGAACGGCTTCTTGACGATCGGGAAGATTTGCTTCTGGACGACCTCGAAGAGCTA
TGGCGGCGGCGGCGTCGGTCTCGTGAACGCGATCGTGAGCGAGTACGACGTCTCCGCGAC
CTAGATCGAGACCGAGACCGTCTGCGACGATACCGACCACCTCGTCCGCGATGACGTCGC
CCACCGCCACCACCACCGCGTTGTTCGGAAAGTTCTTGCAATTTTGGATTTACAACTTGT
TTAGCTTCCTTCAATACAGAAATCAAATCTGAAGCCTTAGCAGCATTCGAAGGCGTAAAG
AAAGTGTATGCAGTTCCAGTTTTGTTTGTTCTTCCTGTTCTTCCAATCCGGTGAACATAA
TCTTCAGAGTTGCTAGGATAATCAAAATTGATGACAAATTTCACATCATCAACATCTAAT
CCTCTAGCTGCTACATCAGTTGCTACAAGAATAGGAGCTTTTCCACTACGAAAATCTGCA
AAAGAGTATTTAAATCAAATGTGGTTCGACACTAAGGAAAAATGGCTATCTGAA
(3174 bp)

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