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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14020_c0_seq4
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_spatacsin_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008088 P axo-dendritic transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0048675 P axon extension
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.36 TPM:0.36
ORF EntryO_BomoSK17414_3prime_partial:A_BomoSK_comp14020_c0_seq4
Sequence
(Nucleotide)
CCTCTCGTTCCCGCCAAAAAGTCCTTGTGTCCTGCTATAGACAATAACGTTCGGTACCTG
CTGAGCATGTCGTGCGCCACGTCGGGCCTGTAGGTGACCATGTCCCGGAGGTAAGCCTGG
TCGTTGCAGAGCGCGCGTCTGTAGGCGAGTTCGCGCCACGCCTCCCCGCTGCGTCCCGAA
AGCAGCACTAAACCCTCCATGAAACTCAGATATTCGCTGACAAGTCTATACGTTTTTTCC
GTAGTTCGATTCAATATAAGTCGTGTAGGAGAAGCGTTTAGTAAGGATATTTGTAGGGCG
ATCTGCTGCGCCAGAGCCGCCATTTCGCCAGCGAATCCAGTACATCCGCCCTGGAGGTAC
AGCTCCGCCGCGTCCGTGCAATGGTTCAGCGCGGTCTCGAGGAGCAGCCTCGTCGAGGTG
TTGTCGTGAATCAACAACCAGGTCGGCGGTTGGAAGGGCTTCTTCGATACCAACCTGGCG
GCATCCAAAGCCATTTTTTCTAAATCCTCAATCAAGTTCAATGCCTGTTTCTTCTTGACG
CCGGCCGCCTCGGCGTACATGTTGAAGTGTAGGGCGACCATTATGTACGTGTCGGTATCG
CCCGGACAATGGTTCTTCAGGAAATCGAGCAGGCCTTGTTTGAACTCCGCTATTTTATCG
GGTTGCTGCCCTAACATATAATCGAATTGACCGAGAAGATATTCGAATTGGTGATTGTCT
CTTAGCGCCTGGAATATATAAGCGCACTCTGTGTAGCGCGCGAGGCCGGTCAGCAGACGC
ACCATGAGGCGCCACGAGCGGGCCGCCAGCAGCCGTGACGTCAGAGCCTGCGCCGACCGC
ACCGTCACCGCCACGCCCTCCGTGTCGCACGCGCAAGAGAAGCACTCGTGCGCCATCACC
AGCAACTCTATCGCTATTATGTTCACCTGTTTCGATGACAATTTGGCACCCTTCGTTATC
TTCCTAACGTTCGATTTGACCTCGTATCGGACGTGCACGTTATTCCTTGTTATAACATCG
AATAAATTCCTCCGGGAGTCGCGGGTCAGCTTGTTACCAGCGCTGTAGACCGTCGACACG
GAATACACGGACTCAGTTTCCGCAGACAGTAAGGTACCTTCGCCCGTTAATACCGAACCC
GCTTCCTCTCCCTCAACGTGCTGATATTCTTCATCTATCAAAGTCTCGACGTCAAGACAA
CTATCGTCTAGAGCGTTCTCTGGAACTCTCGATACGGTCGTCGCTTTGTATATCTTCTGG
AAGGCCATTAGGTGATCGAGTATCAGCCTGCCTATTTGGCTACAAGCGTCCGGCCTCATG
TTTAGGAACATCTCGATGTCGGAGTTGATCGCGTAGCCCCATAGTGTGTATTGAAAGTGC
TCCTTTTGTCTGAAGGTTGACGTCTTGACCAGATGCGGCGATATGATCGCTGCTACCATC
TCCCGGCAAAGGTATTCTGCTACCTGTTTAGTGGGGATGTTGAATGTTCTAAAAACGAGG
TTCGCCAACGACAGCCGCGCTCGGCCGCTCACGAAATTTATAAAATCGAGGGCTCGATTC
TGATACTTCAACACCGACGAATAGTCCCAGCCGATTTGCAAAGCTATCCGGAAGTAGCTG
GCCACCTGTTTGGCTAGAGACAAGCCGCTTCGCACGGCAAGGGCGTCCAACGCGGACAGC
CGGTCGGCCTCTTCGCGAGCCGCGAGGTGCGAGCTGTCTGGAGCATTCATTTGTTTCTCT
TGTATGACTACCAGCTCTTCAAAACTCGCGTCGGACACGCCTGAAATTGACAGTTTGTTT
TGCAAAACCGGAGACGATATCACTAATCTCAATTCTTGGGGTAGCTCGTAAGGCGAGCAC
GTTCCTTCGGCCAGCTTCAGGCTGGATCTCAGGATTTGGACGGGGCACGGCGGCGGCCGG
TACCTGAACTCCGGCTGCGTTTTGAACAGCGTAGACAAACGGAATGCGTCGACGATGAGT
CTGAGCTCCAAAAGCTGGAAGATCACCTTCCGCCAACCGTCAATCGCTTCGGGCTCCTCG
AGTAGGACCGTTTTCTCGATATTACCGACATCCGATTCGACTTCGATCTCGTTCAACGTC
ATCGAGAAGGGTCTCTCTGAGTTCGAGCTCCCAACGTTGTTCGAGACGTTTCTATCTTTC
TGTCCGGTCGCTATGAAGTGTAACGTGTTCGCATAATTGTTCAAGAATATGCTGTTCGGT
TCGGTTTTAAAGTACGCATTCCACATTGAATGTTCGATTTCTTCGCGCAAACGACCGTAC
TCTAAATTCTCTTCGAACCAATTCATGATGATCTTTAGGGAATAAAATTTCTGAACGGGA
TCTTTTATCTTCGCCGAGTAGTCCAGGAGGAAGTCTACTGCGTCTTTGAAAGTGACGCCT
GCCCTTTTAAACGCTTCACTGCATTCCGCTATAAAGAGTGTCAAATCTTTTTCCTCGATA
CCATCATGTTTTTGCAGTAACACTTCATATTTATCTGTCCATTCCGCGATCAATATTTTG
TTGATCGATAAGTCCGACAGTTTCGCTATTTTAAGTGCCACGTCATAATTACGATTCGAA
GTGTACACGTCGATGCTCTCACAAAGATGCTGTTTAAAATCGTCTTCGAACATCCTCGAG
ATGTTTATGACGAACGACGTCTCCATAGATATCTTAAGGATTTCGAAGAGAGTGATGAAA
TTCGGCGACGGCACTAAAAAGTCTTTTCCGAATTCCGCTTTAGCCAACAATCTCAAGAAC
TCTCTTTGATGGTAGGCGCTGTCAAAGTTTTCGCTGATCGCTATCTTGATTAAGGAGACC
GCAACGCGCTGGAGGAATTCTTTTGACATTTGCCACGACAACCTGTTGGACTCCACGCTA
TATTTTCGTTGACAATGCAGAATAAAGCTCGTTAAAAGCTTACTAGACTCCAAATCGAAA
TGATGTTTTCTTATGCAGCGATAGAGAAAACCGGTGAGGAGTTTAAGTGGGCTGTCCGGC
ATAAATATGGTCATAGATTCGTGCAGAGTAGTAATGTATCCTTCGTACAAGCACAGTTCG
GCCACCCGTTGGAATTGTTCAGCAGATGAGCACTGCTGATCAATTATCTGTTGCATGTCG
TTCGATGTGCATTTCGTGGGTCCCATTGAAGACAATACCCATTGCGCCCAGAGAACGTCC
ACGGCGTTTGGTTCGTAGCAACTGGCTATTAGTACGAGGAGTGGCTCTCGACACAGATCA
GCAGCCCTTAGCAGCGCAGCCGGAGGGTCCTCCGGGCCGTGGCACGCGGCCGCCACCTCC
CACAGCTCCCGGCCCAAATACGCATTGAATGTTCCTTCCAGTCCGCCGCTCGGTTTTATA
TTAATTTCGACCGAATTCAACCTAGATAGCCGCCTCTGACCATTCGTCGGAGACTTTAAT
TCCTTATCGGAACAATCTGTTTCCGTATTCTTGTGCAGCATAATATGCTTTAAGTGTTCG
GCATACGAACGTTTTTCAAATTCTTGTGATAAATGCAGCATCTGCTGTAAAGGGTATCGG
AGCACGTCTCCGAACAATAGGAAATTGAACCACGAATTTGTTTTGATGAACTCCCTGAGC
TGCATTTCGGGAAGTGGTAAATTATGGAGCATAGCGAATTTCACCATTGTTTGTGATTCG
TATAACACGAACGACATGTCCAACTTGCCCTCGTTTTCCTGCTTCACTTTCAAACTGTGA
AGTGTTATCTCCTCTAAATGCTTCAAAATATCTTTGGCCACATCGTCGTTACTTTGAATG
AGTTTGGTCATGTACTCGTTGACCGTTTTATTGGCCTTCTCTTCGGACACTCCGTTTCTT
ACTAAGTAATTCTTTATCATATTCGCAGCAGATACGTGGACCCTGCATCTTGTTGGATTA
CACCCGATCATTGCTACGAACGAAACCGCACAAGCTGTAAGGGCCGGATCGGACCAATTC
TGTAAAGCCAGAGCGTGCGCTTCACAACAAGCGCTTTTGATGCTCTTATCTTGCAATCGG
TTGTATGTCTGGTATTGCTGAGCCACAAAGGCTTGACTGGCGTTACAAGGCCGATACTGT
TTTAAATAATACAGGTGATTCAACTTAGCGACGTAGCCAAATCTTTTCATTAGCTTTTCA
TTTGCAAAGTCTGGCATTTCTGTTCCTTTTTGAGATAAGGCTTTTATACACGCTGCTTTG
ACGTCTACATCATTGGACAGCAGACTACCGAGGCTTCGCCTGTCAGGTTTATCAGCAAAG
AGATTGTTTGTGGTCTGGTTAATCAATTGGAATTCAAATATTTTTGAAACGTCCAATCCT
CTGTATCCGGACAGTAGCTGGTACACATTCACATCTTTTGAATCATACATTTGATTCAAA
TCTGAGTATTTTTTGTAAACGCTGTGCAAATGAGGAAGTTTGTCTTTATATATTTTATTT
GGCAAAACAAAATCTGTAAAGTGTAAATAGTCCTCTTTGGAAAATATATCAAACAATTTT
GTAGAATCCTCCAACAAAATCATTCCTAGGACTAGGTGAGGATTGGCTGTAATGTAATCA
TGAATATTATCTTTGGCTATCTGCTCGCATGTCTTGTATACGGGAAGGACGTGACTTTGT
CGATCGGAAGTTTGTTCAATGCTTTTAAATAGCAGCCAAAGTTCTATACAATCCTTTGCT
TCCTGCTCCACACCGGACAAGTCCGTGTCTAAAATGTGGCCTTCCACACACATAGTCAAT
ACTTTATACAGTTTATTCTTCACACAATACTTTGCCAACTGTACATAAAAATGTTGTTTA
GTTATGGTAGAACAAGATTCCGTGAAAATGTCATCTACTAATTTCAAATTCTGAGTATGG
GCAAGTCTCGAAATGATTTGATACAAATCATCTCGTTCGTCATCATTTACAATACCATAA
GAACAAAGTGTATCATAAATGCACATTTTAGTGTAAGCGTAACATTTGCTTACAGACACG
CTGGCTATCATTTCGTGTGTAATCGACCAATGACGAAAGATTTCATCCAAACTTTCTAGG
ACTTTAGTGTCGAAGCCAGTAGTGTCAACATTGAGCAGCTTCTGGACAAAGCTTTCGTTG
TTGAAAAAATTGTAACGAGCATTCTTGTCTCGTACCACTTCCGACAGCTGAACATTTATC
CAACGGATCAAAATCATTGCTTTATTCTTTTCTACAAGATAACTCCACATTTCTTCAGGC
GAGGAAAATTCCAATAAAGAAAATTCAAATGATTGAAAAAACAATGCAGTTGCAATTTTA
GTTTTCCAAGAAACAGGATATTTCTCAATGTTTTCTATTGTTAATGCTTTCACTTCACTC
TCATTTACAAATATTCTATCCTTCCCTGTGCCAAACACTTTATTCTGTTTATAAGTGCCA
TCAATCTGAAATGACTTTTCTAAATATCTTAGTAAATTCCAATGTCGCTTGAATTCTAAC
CATTTTGGAATGTTTTCACTCAACATGTCTTTTGATATCTTTTCTAATTGTTCCACAAGA
AAATCCCTGTATTCTATTGCACTTGAAGTTTCAGCAAGAGACATCAGATGTTCTTCTGGG
TTTATTTTAACTTTGCTTAATACATGGAGAACTTTAAATATTTGTTTTCTTAACAGCAAC
TGGACAGTCCATACTTTCACCTCTGCAATAAACCAATCTCGGGCACTTTCCTCATTCCAA
CTGTTTTTTTCCATCAAATATTTGATAGCTAGTGTTAAATGAGTGCCTTTAGCCGCTGCT
TCTCTAACAACATCTCTAGGTGATTTTTCTTCCCAGCACGACCATATTACTTTTTCATTT
TGATTTAGGCCCTCCATTTTTGTTTATATTGCATTAAATTCCAATAGAACTATATTACAT
GAAGCGGGTATTTGGTATCATAAATTCGGATTTAATTGAAACGATTAAAGTCTTGTTATT
TTTTTAATTAAACAAACACTACAGATCTGTCTAACTGCTTATATAGGTACATTAAATAAT
CATTAAATAGTATTTATATATAATTAAATCACATAATCTTCACTTCAATTTTATGATACC
AAAT
(6064 bp)

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