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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14020_c0_seq3
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_spatacsin_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008088 P axo-dendritic transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0048675 P axon extension
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.16 TPM:0.16
ORF EntryO_BomoSK17413_complete:A_BomoSK_comp14020_c0_seq3
Sequence
(Nucleotide)
ATCAACATAAGATTCAACATAATTTTCAATACGATTATTTGCTAAAACGCTTACCTCAGA
TATTCGCTGACAAGTCTATACGTTTTTTCCGTAGTTCGATTCAATATAAGTCGTGTAGGA
GAAGCGTTTAGTAAGGATATTTGTAGGGCGATCTGCTGCGCCAGAGCCGCCATTTCGCCA
GCGAATCCAGTACATCCGCCCTGGAGGTACAGCTCCGCCGCGTCCGTGCAATGGTTCAGC
GCGGTCTCGAGGAGCAGCCTCGTCGAGGTGTTGTCGTGAATCAACAACCAGGTCGGCGGT
TGGAAGGGCTTCTTCGATACCAACCTGGCGGCATCCAAAGCCATTTTTTCTAAATCCTCA
ATCAAGTTCAATGCCTGTTTCTTCTTGACGCCGGCCGCCTCGGCGTACATGTTGAAGTGT
AGGGCGACCATTATGTACGTGTCGGTATCGCCCGGACAATGGTTCTTCAGGAAATCGAGC
AGGCCTTGTTTGAACTCCGCTATTTTATCGGGTTGCTGCCCTAACATATAATCGAATTGA
CCGAGAAGATATTCGAATTGGTGATTGTCTCTTAGCGCCTGGAATATATAAGCGCACTCT
GTGTAGCGCGCGAGGCCGGTCAGCAGACGCACCATGAGGCGCCACGAGCGGGCCGCCAGC
AGCCGTGACGTCAGAGCCTGCGCCGACCGCACCGTCACCGCCACGCCCTCCGTGTCGCAC
GCGCAAGAGAAGCACTCGTGCGCCATCACCAGCAACTCTATCGCTATTATGTTCACCTGT
TTCGATGACAATTTGGCACCCTTCGTTATCTTCCTAACGTTCGATTTGACCTCGTATCGG
ACGTGCACGTTATTCCTTGTTATAACATCGAATAAATTCCTCCGGGAGTCGCGGGTCAGC
TTGTTACCAGCGCTGTAGACCGTCGACACGGAATACACGGACTCAGTTTCCGCAGACAGT
AAGGTACCTTCGCCCGTTAATACCGAACCCGCTTCCTCTCCCTCAACGTGCTGATATTCT
TCATCTATCAAAGTCTCGACGTCAAGACAACTATCGTCTAGAGCGTTCTCTGGAACTCTC
GATACGGTCGTCGCTTTGTATATCTTCTGGAAGGCCATTAGGTGATCGAGTATCAGCCTG
CCTATTTGGCTACAAGCGTCCGGCCTCATGTTTAGGAACATCTCGATGTCGGAGTTGATC
GCGTAGCCCCATAGTGTGTATTGAAAGTGCTCCTTTTGTCTGAAGGTTGACGTCTTGACC
AGATGCGGCGATATGATCGCTGCTACCATCTCCCGGCAAAGGTATTCTGCTACCTGTTTA
GTGGGGATGTTGAATGTTCTAAAAACGAGGTTCGCCAACGACAGCCGCGCTCGGCCGCTC
ACGAAATTTATAAAATCGAGGGCTCGATTCTGATACTTCAACACCGACGAATAGTCCCAG
CCGATTTGCAAAGCTATCCGGAAGTAGCTGGCCACCTGTTTGGCTAGAGACAAGCCGCTT
CGCACGGCAAGGGCGTCCAACGCGGACAGCCGGTCGGCCTCTTCGCGAGCCGCGAGGTGC
GAGCTGTCTGGAGCATTCATTTGTTTCTCTTGTATGACTACCAGCTCTTCAAAACTCGCG
TCGGACACGCCTGAAATTGACAGTTTGTTTTGCAAAACCGGAGACGATATCACTAATCTC
AATTCTTGGGGTAGCTCGTAAGGCGAGCACGTTCCTTCGGCCAGCTTCAGGCTGGATCTC
AGGATTTGGACGGGGCACGGCGGCGGCCGGTACCTGAACTCCGGCTGCGTTTTGAACAGC
GTAGACAAACGGAATGCGTCGACGATGAGTCTGAGCTCCAAAAGCTGGAAGATCACCTTC
CGCCAACCGTCAATCGCTTCGGGCTCCTCGAGTAGGACCGTTTTCTCGATATTACCGACA
TCCGATTCGACTTCGATCTCGTTCAACGTCATCGAGAAGGGTCTCTCTGAGTTCGAGCTC
CCAACGTTGTTCGAGACGTTTCTATCTTTCTGTCCGGTCGCTATGAAGTGTAACGTGTTC
GCATAATTGTTCAAGAATATGCTGTTCGGTTCGGTTTTAAAGTACGCATTCCACATTGAA
TGTTCGATTTCTTCGCGCAAACGACCGTACTCTAAATTCTCTTCGAACCAATTCATGATG
ATCTTTAGGGAATAAAATTTCTGAACGGGATCTTTTATCTTCGCCGAGTAGTCCAGGAGG
AAGTCTACTGCGTCTTTGAAAGTGACGCCTGCCCTTTTAAACGCTTCACTGCATTCCGCT
ATAAAGAGTGTCAAATCTTTTTCCTCGATACCATCATGTTTTTGCAGTAACACTTCATAT
TTATCTGTCCATTCCGCGATCAATATTTTGTTGATCGATAAGTCCGACAGTTTCGCTATT
TTAAGTGCCACGTCATAATTACGATTCGAAGTGTACACGTCGATGCTCTCACAAAGATGC
TGTTTAAAATCGTCTTCGAACATCCTCGAGATGTTTATGACGAACGACGTCTCCATAGAT
ATCTTAAGGATTTCGAAGAGAGTGATGAAATTCGGCGACGGCACTAAAAAGTCTTTTCCG
AATTCCGCTTTAGCCAACAATCTCAAGAACTCTCTTTGATGGTAGGCGCTGTCAAAGTTT
TCGCTGATCGCTATCTTGATTAAGGAGACCGCAACGCGCTGGAGGAATTCTTTTGACATT
TGCCACGACAACCTGTTGGACTCCACGCTATATTTTCGTTGACAATGCAGAATAAAGCTC
GTTAAAAGCTTACTAGACTCCAAATCGAAATGATGTTTTCTTATGCAGCGATAGAGAAAA
CCGGTGAGGAGTTTAAGTGGGCTGTCCGGCATAAATATGGTCATAGATTCGTGCAGAGTA
GTAATGTATCCTTCGTACAAGCACAGTTCGGCCACCCGTTGGAATTGTTCAGCAGATGAG
CACTGCTGATCAATTATCTGTTGCATGTCGTTCGATGTGCATTTCGTGGGTCCCATTGAA
GACAATACCCATTGCGCCCAGAGAACGTCCACGGCGTTTGGTTCGTAGCAACTGGCTATT
AGTACGAGGAGTGGCTCTCGACACAGATCAGCAGCCCTTAGCAGCGCAGCCGGAGGGTCC
TCCGGGCCGTGGCACGCGGCCGCCACCTCCCACAGCTCCCGGCCCAAATACGCATTGAAT
GTTCCTTCCAGTCCGCCGCTCGGTTTTATATTAATTTCGACCGAATTCAACCTAGATAGC
CGCCTCTGACCATTCGTCGGAGACTTTAATTCCTTATCGGAACAATCTGTTTCCGTATTC
TTGTGCAGCATAATATGCTTTAAGTGTTCGGCATACGAACGTTTTTCAAATTCTTGTGAT
AAATGCAGCATCTGCTGTAAAGGGTATCGGAGCACGTCTCCGAACAATAGGAAATTGAAC
CACGAATTTGTTTTGATGAACTCCCTGAGCTGCATTTCGGGAAGTGGTAAATTATGGAGC
ATAGCGAATTTCACCATTGTTTGTGATTCGTATAACACGAACGACATGTCCAACTTGCCC
TCGTTTTCCTGCTTCACTTTCAAACTGTGAAGTGTTATCTCCTCTAAATGCTTCAAAATA
TCTTTGGCCACATCGTCGTTACTTTGAATGAGTTTGGTCATGTACTCGTTGACCGTTTTA
TTGGCCTTCTCTTCGGACACTCCGTTTCTTACTAAGTAATTCTTTATCATATTCGCAGCA
GATACGTGGACCCTGCATCTTGTTGGATTACACCCGATCATTGCTACGAACGAAACCGCA
CAAGCTGTAAGGGCCGGATCGGACCAATTCTGTAAAGCCAGAGCGTGCGCTTCACAACAA
GCGCTTTTGATGCTCTTATCTTGCAATCGGTTGTATGTCTGGTATTGCTGAGCCACAAAG
GCTTGACTGGCGTTACAAGGCCGATACTGTTTTAAATAATACAGGTGATTCAACTTAGCG
ACGTAGCCAAATCTTTTCATTAGCTTTTCATTTGCAAAGTCTGGCATTTCTGTTCCTTTT
TGAGATAAGGCTTTTATACACGCTGCTTTGACGTCTACATCATTGGACAGCAGACTACCG
AGGCTTCGCCTGTCAGGTTTATCAGCAAAGAGATTGTTTGTGGTCTGGTTAATCAATTGG
AATTCAAATATTTTTGAAACGTCCAATCCTCTGTATCCGGACAGTAGCTGGTACACATTC
ACATCTTTTGAATCATACATTTGATTCAAATCTGAGTATTTTTTGTAAACGCTGTGCAAA
TGAGGAAGTTTGTCTTTATATATTTTATTTGGCAAAACAAAATCTGTAAAGTGTAAATAG
TCCTCTTTGGAAAATATATCAAACAATTTTGTAGAATCCTCCAACAAAATCATTCCTAGG
ACTAGGTGAGGATTGGCTGTAATGTAATCATGAATATTATCTTTGGCTATCTGCTCGCAT
GTCTTGTATACGGGAAGGACGTGACTTTGTCGATCGGAAGTTTGTTCAATGCTTTTAAAT
AGCAGCCAAAGTTCTATACAATCCTTTGCTTCCTGCTCCACACCGGACAAGTCCGTGTCT
AAAATGTGGCCTTCCACACACATAGTCAATACTTTATACAGTTTATTCTTCACACAATAC
TTTGCCAACTGTACATAAAAATGTTGTTTAGTTATGGTAGAACAAGATTCCGTGAAAATG
TCATCTACTAATTTCAAATTCTGAGTATGGGCAAGTCTCGAAATGATTTGATACAAATCA
TCTCGTTCGTCATCATTTACAATACCATAAGAACAAAGTGTATCATAAATGCACATTTTA
GTGTAAGCGTAACATTTGCTTACAGACACGCTGGCTATCATTTCGTGTGTAATCGACCAA
TGACGAAAGATTTCATCCAAACTTTCTAGGACTTTAGTGTCGAAGCCAGTAGTGTCAACA
TTGAGCAGCTTCTGGACAAAGCTTTCGTTGTTGAAAAAATTGTAACGAGCATTCTTGTCT
CGTACCACTTCCGACAGCTGAACATTTATCCAACGGATCAAAATCATTGCTTTATTCTTT
TCTACAAGATAACTCCACATTTCTTCAGGCGAGGAAAATTCCAATAAAGAAAATTCAAAT
GATTGAAAAAACAATGCAGTTGCAATTTTAGTTTTCCAAGAAACAGGATATTTCTCAATG
TTTTCTATTGTTAATGCTTTCACTTCACTCTCATTTACAAATATTCTATCCTTCCCTGTG
CCAAACACTTTATTCTGTTTATAAGTGCCATCAATCTGAAATGACTTTTCTAAATATCTT
AGTAAATTCCAATGTCGCTTGAATTCTAACCATTTTGGAATGTTTTCACTCAACATGTCT
TTTGATATCTTTTCTAATTGTTCCACAAGAAAATCCCTGTATTCTATTGCACTTGAAGTT
TCAGCAAGAGACATCAGATGTTCTTCTGGGTTTATTTTAACTTTGCTTAATACATGGAGA
ACTTTAAATATTTGTTTTCTTAACAGCAACTGGACAGTCCATACTTTCACCTCTGCAATA
AACCAATCTCGGGCACTTTCCTCATTCCAACTGTTTTTTTCCATCAAATATTTGATAGCT
AGTGTTAAATGAGTGCCTTTAGCCGCTGCTTCTCTAACAACATCTCTAGGTGATTTTTCT
TCCCAGCACGACCATATTACTTTTTCATTTTGATTTAGGCCCTCCATTTTTGTTTATATT
GCATTAAATTCCAATAGAACTATATTACATGAAGCGGGTATTTGGTATCATAAATTCGGA
TTTAATTGAAACGATTAAAGTCTTGTTATTTTTTTAATTAAACAAACACTACAGATCTGT
CTAACTGCTTATATAGGTACATTAAATAATCATTAAATAGTATTTATATATAATTAAATC
ACATAATCTTCACTTCAATTTTATGATACCAAAT
(5914 bp)

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