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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14020_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_spatacsin_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008088 P axo-dendritic transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0048675 P axon extension
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:4.70 TPM:4.72
ORF EntryO_BomoSK17411_complete:A_BomoSK_comp14020_c0_seq1
Sequence
(Nucleotide)
AACTTTAGGCTATAATATAGGCTAGGTATAATTTATAATACAAATAATTCGATTACTTGG
TTTATTGATCTCTTATTTTAGATACAGAAAAAAATACAATTAATCAGTCCACTCGATAAA
TCTCACAGGCGATTATTTTTATAATATCAACAATAATAAATGGTTACATTATTTCGATTA
TAATAATATCTTCTTTGTCCTTGTCATGTCCCACGCCATTTGCAACAGTCCCATCTTATT
TGATTAATAATGTTTCGATTATATTATAAGCATGCAATATTATAGCTTAAGATTAAATAT
GCAATGTTTTTTTTCAATACTTTGTTGAATATAGTATTTTTGTGAGTGAGTAACTCAAAT
ATTTATTTTATATCATCTACACAGATTACGGAGTTCAGTCATAGCTGCCTGCGATACGGA
AGTCTTGTTTCTCTCTGTTTTATATCTGCTGAGCATGTCGTGCGCCACGTCGGGCCTGTA
GGTGACCATGTCCCGGAGGTAAGCCTGGTCGTTGCAGAGCGCGCGTCTGTAGGCGAGTTC
GCGCCACGCCTCCCCGCTGCGTCCCGAAAGCAGCACTAAACCCTCCATGAAACTCAGATA
TTCGCTGACAAGTCTATACGTTTTTTCCGTAGTTCGATTCAATATAAGTCGTGTAGGAGA
AGCGTTTAGTAAGGATATTTGTAGGGCGATCTGCTGCGCCAGAGCCGCCATTTCGCCAGC
GAATCCAGTACATCCGCCCTGGAGGTACAGCTCCGCCGCGTCCGTGCAATGGTTCAGCGC
GGTCTCGAGGAGCAGCCTCGTCGAGGTGTTGTCGTGAATCAACAACCAGGTCGGCGGTTG
GAAGGGCTTCTTCGATACCAACCTGGCGGCATCCAAAGCCATTTTTTCTAAATCCTCAAT
CAAGTTCAATGCCTGTTTCTTCTTGACGCCGGCCGCCTCGGCGTACATGTTGAAGTGTAG
GGCGACCATTATGTACGTGTCGGTATCGCCCGGACAATGGTTCTTCAGGAAATCGAGCAG
GCCTTGTTTGAACTCCGCTATTTTATCGGGTTGCTGCCCTAACATATAATCGAATTGACC
GAGAAGATATTCGAATTGGTGATTGTCTCTTAGCGCCTGGAATATATAAGCGCACTCTGT
GTAGCGCGCGAGGCCGGTCAGCAGACGCACCATGAGGCGCCACGAGCGGGCCGCCAGCAG
CCGTGACGTCAGAGCCTGCGCCGACCGCACCGTCACCGCCACGCCCTCCGTGTCGCACGC
GCAAGAGAAGCACTCGTGCGCCATCACCAGCAACTCTATCGCTATTATGTTCACCTGTTT
CGATGACAATTTGGCACCCTTCGTTATCTTCCTAACGTTCGATTTGACCTCGTATCGGAC
GTGCACGTTATTCCTTGTTATAACATCGAATAAATTCCTCCGGGAGTCGCGGGTCAGCTT
GTTACCAGCGCTGTAGACCGTCGACACGGAATACACGGACTCAGTTTCCGCAGACAGTAA
GGTACCTTCGCCCGTTAATACCGAACCCGCTTCCTCTCCCTCAACGTGCTGATATTCTTC
ATCTATCAAAGTCTCGACGTCAAGACAACTATCGTCTAGAGCGTTCTCTGGAACTCTCGA
TACGGTCGTCGCTTTGTATATCTTCTGGAAGGCCATTAGGTGATCGAGTATCAGCCTGCC
TATTTGGCTACAAGCGTCCGGCCTCATGTTTAGGAACATCTCGATGTCGGAGTTGATCGC
GTAGCCCCATAGTGTGTATTGAAAGTGCTCCTTTTGTCTGAAGGTTGACGTCTTGACCAG
ATGCGGCGATATGATCGCTGCTACCATCTCCCGGCAAAGGTATTCTGCTACCTGTTTAGT
GGGGATGTTGAATGTTCTAAAAACGAGGTTCGCCAACGACAGCCGCGCTCGGCCGCTCAC
GAAATTTATAAAATCGAGGGCTCGATTCTGATACTTCAACACCGACGAATAGTCCCAGCC
GATTTGCAAAGCTATCCGGAAGTAGCTGGCCACCTGTTTGGCTAGAGACAAGCCGCTTCG
CACGGCAAGGGCGTCCAACGCGGACAGCCGGTCGGCCTCTTCGCGAGCCGCGAGGTGCGA
GCTGTCTGGAGCATTCATTTGTTTCTCTTGTATGACTACCAGCTCTTCAAAACTCGCGTC
GGACACGCCTGAAATTGACAGTTTGTTTTGCAAAACCGGAGACGATATCACTAATCTCAA
TTCTTGGGGTAGCTCGTAAGGCGAGCACGTTCCTTCGGCCAGCTTCAGGCTGGATCTCAG
GATTTGGACGGGGCACGGCGGCGGCCGGTACCTGAACTCCGGCTGCGTTTTGAACAGCGT
AGACAAACGGAATGCGTCGACGATGAGTCTGAGCTCCAAAAGCTGGAAGATCACCTTCCG
CCAACCGTCAATCGCTTCGGGCTCCTCGAGTAGGACCGTTTTCTCGATATTACCGACATC
CGATTCGACTTCGATCTCGTTCAACGTCATCGAGAAGGGTCTCTCTGAGTTCGAGCTCCC
AACGTTGTTCGAGACGTTTCTATCTTTCTGTCCGGTCGCTATGAAGTGTAACGTGTTCGC
ATAATTGTTCAAGAATATGCTGTTCGGTTCGGTTTTAAAGTACGCATTCCACATTGAATG
TTCGATTTCTTCGCGCAAACGACCGTACTCTAAATTCTCTTCGAACCAATTCATGATGAT
CTTTAGGGAATAAAATTTCTGAACGGGATCTTTTATCTTCGCCGAGTAGTCCAGGAGGAA
GTCTACTGCGTCTTTGAAAGTGACGCCTGCCCTTTTAAACGCTTCACTGCATTCCGCTAT
AAAGAGTGTCAAATCTTTTTCCTCGATACCATCATGTTTTTGCAGTAACACTTCATATTT
ATCTGTCCATTCCGCGATCAATATTTTGTTGATCGATAAGTCCGACAGTTTCGCTATTTT
AAGTGCCACGTCATAATTACGATTCGAAGTGTACACGTCGATGCTCTCACAAAGATGCTG
TTTAAAATCGTCTTCGAACATCCTCGAGATGTTTATGACGAACGACGTCTCCATAGATAT
CTTAAGGATTTCGAAGAGAGTGATGAAATTCGGCGACGGCACTAAAAAGTCTTTTCCGAA
TTCCGCTTTAGCCAACAATCTCAAGAACTCTCTTTGATGGTAGGCGCTGTCAAAGTTTTC
GCTGATCGCTATCTTGATTAAGGAGACCGCAACGCGCTGGAGGAATTCTTTTGACATTTG
CCACGACAACCTGTTGGACTCCACGCTATATTTTCGTTGACAATGCAGAATAAAGCTCGT
TAAAAGCTTACTAGACTCCAAATCGAAATGATGTTTTCTTATGCAGCGATAGAGAAAACC
GGTGAGGAGTTTAAGTGGGCTGTCCGGCATAAATATGGTCATAGATTCGTGCAGAGTAGT
AATGTATCCTTCGTACAAGCACAGTTCGGCCACCCGTTGGAATTGTTCAGCAGATGAGCA
CTGCTGATCAATTATCTGTTGCATGTCGTTCGATGTGCATTTCGTGGGTCCCATTGAAGA
CAATACCCATTGCGCCCAGAGAACGTCCACGGCGTTTGGTTCGTAGCAACTGGCTATTAG
TACGAGGAGTGGCTCTCGACACAGATCAGCAGCCCTTAGCAGCGCAGCCGGAGGGTCCTC
CGGGCCGTGGCACGCGGCCGCCACCTCCCACAGCTCCCGGCCCAAATACGCATTGAATGT
TCCTTCCAGTCCGCCGCTCGGTTTTATATTAATTTCGACCGAATTCAACCTAGATAGCCG
CCTCTGACCATTCGTCGGAGACTTTAATTCCTTATCGGAACAATCTGTTTCCGTATTCTT
GTGCAGCATAATATGCTTTAAGTGTTCGGCATACGAACGTTTTTCAAATTCTTGTGATAA
ATGCAGCATCTGCTGTAAAGGGTATCGGAGCACGTCTCCGAACAATAGGAAATTGAACCA
CGAATTTGTTTTGATGAACTCCCTGAGCTGCATTTCGGGAAGTGGTAAATTATGGAGCAT
AGCGAATTTCACCATTGTTTGTGATTCGTATAACACGAACGACATGTCCAACTTGCCCTC
GTTTTCCTGCTTCACTTTCAAACTGTGAAGTGTTATCTCCTCTAAATGCTTCAAAATATC
TTTGGCCACATCGTCGTTACTTTGAATGAGTTTGGTCATGTACTCGTTGACCGTTTTATT
GGCCTTCTCTTCGGACACTCCGTTTCTTACTAAGTAATTCTTTATCATATTCGCAGCAGA
TACGTGGACCCTGCATCTTGTTGGATTACACCCGATCATTGCTACGAACGAAACCGCACA
AGCTGTAAGGGCCGGATCGGACCAATTCTGTAAAGCCAGAGCGTGCGCTTCACAACAAGC
GCTTTTGATGCTCTTATCTTGCAATCGGTTGTATGTCTGGTATTGCTGAGCCACAAAGGC
TTGACTGGCGTTACAAGGCCGATACTGTTTTAAATAATACAGGTGATTCAACTTAGCGAC
GTAGCCAAATCTTTTCATTAGCTTTTCATTTGCAAAGTCTGGCATTTCTGTTCCTTTTTG
AGATAAGGCTTTTATACACGCTGCTTTGACGTCTACATCATTGGACAGCAGACTACCGAG
GCTTCGCCTGTCAGGTTTATCAGCAAAGAGATTGTTTGTGGTCTGGTTAATCAATTGGAA
TTCAAATATTTTTGAAACGTCCAATCCTCTGTATCCGGACAGTAGCTGGTACACATTCAC
ATCTTTTGAATCATACATTTGATTCAAATCTGAGTATTTTTTGTAAACGCTGTGCAAATG
AGGAAGTTTGTCTTTATATATTTTATTTGGCAAAACAAAATCTGTAAAGTGTAAATAGTC
CTCTTTGGAAAATATATCAAACAATTTTGTAGAATCCTCCAACAAAATCATTCCTAGGAC
TAGGTGAGGATTGGCTGTAATGTAATCATGAATATTATCTTTGGCTATCTGCTCGCATGT
CTTGTATACGGGAAGGACGTGACTTTGTCGATCGGAAGTTTGTTCAATGCTTTTAAATAG
CAGCCAAAGTTCTATACAATCCTTTGCTTCCTGCTCCACACCGGACAAGTCCGTGTCTAA
AATGTGGCCTTCCACACACATAGTCAATACTTTATACAGTTTATTCTTCACACAATACTT
TGCCAACTGTACATAAAAATGTTGTTTAGTTATGGTAGAACAAGATTCCGTGAAAATGTC
ATCTACTAATTTCAAATTCTGAGTATGGGCAAGTCTCGAAATGATTTGATACAAATCATC
TCGTTCGTCATCATTTACAATACCATAAGAACAAAGTGTATCATAAATGCACATTTTAGT
GTAAGCGTAACATTTGCTTACAGACACGCTGGCTATCATTTCGTGTGTAATCGACCAATG
ACGAAAGATTTCATCCAAACTTTCTAGGACTTTAGTGTCGAAGCCAGTAGTGTCAACATT
GAGCAGCTTCTGGACAAAGCTTTCGTTGTTGAAAAAATTGTAACGAGCATTCTTGTCTCG
TACCACTTCCGACAGCTGAACATTTATCCAACGGATCAAAATCATTGCTTTATTCTTTTC
TACAAGATAACTCCACATTTCTTCAGGCGAGGAAAATTCCAATAAAGAAAATTCAAATGA
TTGAAAAAACAATGCAGTTGCAATTTTAGTTTTCCAAGAAACAGGATATTTCTCAATGTT
TTCTATTGTTAATGCTTTCACTTCACTCTCATTTACAAATATTCTATCCTTCCCTGTGCC
AAACACTTTATTCTGTTTATAAGTGCCATCAATCTGAAATGACTTTTCTAAATATCTTAG
TAAATTCCAATGTCGCTTGAATTCTAACCATTTTGGAATGTTTTCACTCAACATGTCTTT
TGATATCTTTTCTAATTGTTCCACAAGAAAATCCCTGTATTCTATTGCACTTGAAGTTTC
AGCAAGAGACATCAGATGTTCTTCTGGGTTTATTTTAACTTTGCTTAATACATGGAGAAC
TTTAAATATTTGTTTTCTTAACAGCAACTGGACAGTCCATACTTTCACCTCTGCAATAAA
CCAATCTCGGGCACTTTCCTCATTCCAACTGTTTTTTTCCATCAAATATTTGATAGCTAG
TGTTAAATGAGTGCCTTTAGCCGCTGCTTCTCTAACAACATCTCTAGGTGATTTTTCTTC
CCAGCACGACCATATTACTTTTTCATTTTGATTTAGGCCCTCCATTTTTGTTTATATTGC
ATTAAATTCCAATAGAACTATATTACATGAAGCGGGTATTTGGTATCATAAATTCGGATT
TAATTGAAACGATTAAAGTCTTGTTATTTTTTTAATTAAACAAACACTACAGATCTGTCT
AACTGCTTATATAGGTACATTAAATAATCATTAAATAGTATTTATATATAATTAAATCAC
ATAATCTTCACTTCAATTTTATGATACCAAAT
(6452 bp)

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