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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp14015_c0_seq2
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_1_precursor_[Bombyx_mori]
Ontology
GO:0004175 F endopeptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0008201 F heparin binding
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0010573 P vascular endothelial growth factor production
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030199 P collagen fibril organization
GO:0030574 P collagen catabolic process
GO:0031012 C extracellular matrix
GO:0032964 P collagen biosynthetic process
GO:0043206 P supramolecular fiber organization
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1900748 P positive regulation of vascular endothelial growth factor signaling pathway
Transcript
Level		FPKM:7.35 TPM:7.39
ORF EntryO_BomoSK17359_5prime_partial:A_BomoSK_comp14015_c0_seq2
Sequence
(Nucleotide)
GACGCACGCCGCGCAAAGCACTTGCAGTCGATCAGTCGTGGAGTCGTTTACCTTCCGAGC
GACGAGACGGCCGCCATGTGCGTAGATGCGTGAGCGCAGCGCGCCGCACCGCGACCCACA
GAGAGGCGCAGCTCGCGGCGACGCACGGACCATGCCGTGCTGCCTCTGGGCCGCGCTGTC
TCTGCTCCTCGCGGTCGTCGGCGCCGGCGCCTGGACACCGCCGAGACAGCCCTTGCTGCT
CACTCCGAGACATCGCAGACACGCGCAAGAAACTCATCACTTGCGACTCCTCGGTTGGGA
TCTCAAGTTAAAAGAAAACAAAGCTATTCGTTCGCCTTATTATAAGGAATGTCAGTTTTT
TACGGGACGCGTTCTTCATGAAGAGGGCTCCGCTGTGACGGTTACCGAATGTGACGGACA
GCTGTACGGGCTGCTGCAGGTCGGCGGTGAAGAGTTCGTGCTGCAGCCGACCAGAACGCA
GGAGAAACACGTGTTACGACGCCGAGACGTTACGCACAGCGAGCGTTCGGCCGAGTACAA
CCTCACCGGTGATACGGTCATCGACCTTGATCTTGACTTCGATGAAGATGATGACCTGTT
ACCGACCTCGCACGTACATCCGCGGCACAGCGATCATTCCGACAAAGAGTACTTCCATGA
CATGCATTTGTTCAGAAGACCTGCGTCAGGTGTAAAGGGTCTTTGGCTTGAACTGGCCAT
CGTTGCCGACAACACCATGTTGAAATTTCATGGCCGAGAACGTGTCAAACATTATATTTT
AGCTTTAATGAATATTGTCAGTGCCATCTTCAATGACCCATCACTGGGCTCTAACATCAC
GTTAGTGATCAACAAATTGTTTCTCTACGAGGACAAGGACATAATTTTGAAGTACGGCAA
CATCAAAAAATCGTTAGAAGCTATTAACAAGTGGAACTATAGACATCTCATGAAGCTACC
TGAAGGTAGCACAGGATGGGACGCCACAATATGGTTGACGAGATCCCAGCTTGGAGGGCC
TTCCGGGTTCGCCCCCGTAGGTGGGGTCTGCACCAAAACGCGGTCAGCCGCCATCGACCG
CGACGAAGGATTGACCAGTGCTTTTGTAATTGCACACGAACTCGCTCACTTATTAGGGTT
GACCCACGATGGAGAAGGCAATTGTCAGTCTGAAGCGCTTCGAGGCTCTGTAATGGCACC
GACAGTATTGGCTACCCTACACAACTTTGCCTGGTCAAGTTGTTCAAAGGAACAATTTCA
TGCGAAATCAAAGAAGTGGTGGTGCCTCCATGAGCGTAGCACTGACGAGGGTGTGGAACT
AGGTGGTGCTAAGGAGCTCTCAAATTATGTCTTCACAATGGATGAACAGTGCAGGACTGA
ATTCGGAGAAGGTTTCTCAGTGTGTCGATCCGTAAAGGTTCGGTCTGCGTGCTCAAGGTT
GTGGTGTGCCCACCGCGCTATGCCTCACGTGTGCCGGTCAAAGCGAGCGCCGCCTCTCGA
GGGAACACCCTGTGGACAAAACCAATGGTGCGTGGATCGTGTCTGCGAGCCGATGCCTGG
CCACAGTAAAGAGACTAAGGTTGAAAACAAACATACTCCAGAATGGGGAGATTGGGAGGA
GTGGAGCGCATGCAACGCAGATTGTGGTTACGGCCTCAGGACAAGAACACGAAAATGCAA
ATACAGAGGGTTTGTATCAGAGAGCGCATGTGAGGGTGCTGGATCTCAAGTAGCGACTTG
CTGGGCGGGGTCTTCGTGCGCTGCAACCAGAGACATCCGCTCCGACCTCTGCCATCGCCA
ACAGAGCAGACTCATACCTTATTTACATGCCAACGAGTCCAACCATTGTGAAATTTCGTG
TGTGGACTACGCTGGAGGGTCGCCCACCAATTTCGGAGCCCTACCCGACGGAACGCCCTG
CAGCTACCTTCGACCCTTCGACGTTTGCTTCCAGGGTACGTGCGTGAAAGGTCAATGCAA
TTCATCAGATACAACCTGCAACTGGTGCCCAGACGGCTACTGCAACAACAACACTAACAC
ATACACAAGATTACTCGGTAACGGCTGGACTCGCATGACGATGGTGCCGCACGAAGCACG
TCAACTGTCCATACACATAGCCACACCGATTCCCCTCCACATTGCACTGCGCGAACGGAA
ACGGGACAAGCCGATTCTAGAACTTTCTAAGCACTCCAAAAAATTCGACATCAGCTCCCT
TCAGGACAACTACTTGAAATACGATCCGAGCGTGCCTCAGAATCTTCAGATCGTGGAAAT
GGACAGCAACATTTTAGACTTGAAAGAGAGCTTTCGTTATGAAGGCGAGGCGATCACGGC
TGGGACTCTCCTGCGCTGGAATCAAACCGACACGGACATTTATATAACGTCAGAATCTAG
ACTGCAAACTGATTTGATGATAATGGCAATACCAGTTAATCCTACATTAGAAGATGCGGT
CAGTGTGGACGTGTCAGTAAACTACAGCACTCCAACTGGACGCACGAGACCATTGGAATA
CAGGTGGTCGATAGAGCGCGGTCCGTGTTCCGCGTCCTGCGGTGGCGGTGTGCGATTGAT
AACAGCCCAGTGTCATCGAGATCAGAAATGTCCACCGCCTAGATACGAATCATGCAATAC
ACACAGCTGTGAATTTGTGTGGGCTTCTGACGATTGGGAAGAATGCAGTTCGACATGCGG
TAGCAACGGTGTTCAAGAAAGACAATTGTTCTGTGTTCCATCAAACGCAAGCATGTTATC
GAGGAGAGAGTTTATCAAACACAGCGTGTCACCAGTCATGTGCTCGTCGTCAAAGCCGCC
ACATCGCCAGCCCTGCAACCGTATCCCCTGCCCTGTTTACTGGAGGGAGCAACCCTGGAC
TCCTTGCTCGGCGTCGTGCGGACGCGGCGTGTCCCGGCGTCCGCTCACGTGTCCGGCGTC
AGACGAGCTACTATGCGGACCGAAGCCGCGCGAGCGACGCCGGCGCTGCAGACTCCGGCG
CTGCCCCTCAGCATTGAGAGTCGCAGTGCAGTGCCCCGAACGCGACCACGCGCACTACTG
CGAGCTCTTCACACTGGAACAGCTGCACCGGAACTGCGAGGTGCCGCCGTTCAGGAAATA
TTGCTGTAACGCTTGCAGGGACGCAGACCGCCGTCAGCACAGACGGTACGGCTGAGAAGC
GTCGCTTCTGTCCAACTTAATGGTAGAAACTGCGTTTTTATCAAACTTCTGGGACTACGC
TGAACCGAGAAACCGAACCGGTTATAATGTAGGTTCGTAAACTTCGTAATATGCTAGAAT
GTTTTTAAAAGATTTTACGATGCAACCTATCTTCTTAAGGTCCACATTATTGAATAAATT
ATAATAAACATAACTCTAAAACTGTACATTATGCAAAATTTATTCGTACACAAACATGAT
GTCATAGTATTCTTATATCTTTTAAAGGTCATAGTCAATATACTGAGGCCCATAGTTTCA
AAGCGTTATTTCTATCCTCTTCTTAAGGTAGCGTTTGGAACTAAACGATTACTTAAAAAA
ATAGTATGGTTTATTTTGATAACCACAACTGTGTATTACTACTACAATTTTTCAAATAAT
AATTAACCAACTGGATTTTATTGTTCATTTTTGATAAAAAAAAACTTATTCGAGTATTTT
CAAACGTTGCCTTAAACAATGGTCTCTTGTTATTTAGTTAAAAATAAAAGATTCCATGTC
AGCATAACCGGTATTTTGTACGTCTGTTGTTTTTCGTATTTATAAGTAGATTTTAAGAAG
TAATTTTATATCGAACATGAAGTACGGAACAAAGTGCCATAATTATGTACTACAAATTCA
CCATAATAAAAG
(3852 bp)

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